RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 DGAT2L7PQ6IED9 249 aa8.48□□□□□ -1.05
SNX17-208ENST00000493711 KRTAP19-1Q8IUB9 90 aa8.48□□□□□ -1.05
SNX17-208ENST00000493711 DEFB104AQ8WTQ1 72 aa8.48□□□□□ -1.05
SNX17-208ENST00000493711 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.47□□□□□ -1.05
SNX17-208ENST00000493711 IGKV2-29A2NJV5 120 aaPredicted RBP8.47□□□□□ -1.05
SNX17-208ENST00000493711 HSBP1O75506 76 aa8.47□□□□□ -1.05
SNX17-208ENST00000493711 BTF3P20290 206 aaKnown RBP8.47□□□□□ -1.05
SNX17-208ENST00000493711 PAPPA-AS1Q5QFB9 102 aa8.47□□□□□ -1.05
SNX17-208ENST00000493711 C2orf66Q6UXQ4 117 aa8.47□□□□□ -1.05
SNX17-208ENST00000493711 OR5A1Q8NGJ0 315 aa8.47□□□□□ -1.05
SNX17-208ENST00000493711 TOMM6Q96B49 74 aa8.47□□□□□ -1.05
SNX17-208ENST00000493711 PYGO1Q9Y3Y4 419 aa8.47□□□□□ -1.05
SNX17-208ENST00000493711 HYDINQ4G0P3 5121 aa8.46□□□□□ -1.05
SNX17-208ENST00000493711 LCE6AA0A183 80 aa8.46□□□□□ -1.06
SNX17-208ENST00000493711 SERF1AO75920 110 aa8.46□□□□□ -1.06
SNX17-208ENST00000493711 HBDP02042 147 aa8.46□□□□□ -1.06
SNX17-208ENST00000493711 RBX1P62877 108 aa8.46□□□□□ -1.06
SNX17-208ENST00000493711 COA6Q5JTJ3 125 aaKnown RBP8.46□□□□□ -1.06
SNX17-208ENST00000493711 URB1-AS1Q96HZ7 61 aa8.46□□□□□ -1.06
SNX17-208ENST00000493711 MRPS36P82909 103 aaKnown RBP8.45□□□□□ -1.06
SNX17-208ENST00000493711 MPV17L2Q567V2 206 aa8.45□□□□□ -1.06
SNX17-208ENST00000493711 ERASQ7Z444 233 aa8.45□□□□□ -1.06
SNX17-208ENST00000493711 TMEM141Q96I45 108 aa8.45□□□□□ -1.06
SNX17-208ENST00000493711 TIMM17AQ99595 171 aa8.45□□□□□ -1.06
SNX17-208ENST00000493711 UBE2D4Q9Y2X8 147 aa8.45□□□□□ -1.06
SNX17-208ENST00000493711 NBDYA0A0U1RRE5 68 aa8.44□□□□□ -1.06
SNX17-208ENST00000493711 IGHV3-30P01768 117 aa8.44□□□□□ -1.06
SNX17-208ENST00000493711 IGHV3-33P01772 117 aa8.44□□□□□ -1.06
SNX17-208ENST00000493711 S100A6P06703 90 aa8.44□□□□□ -1.06
SNX17-208ENST00000493711 IGHV3-30-3P0DP02 117 aa8.44□□□□□ -1.06
SNX17-208ENST00000493711 IGHV3-30-5P0DP03 117 aa8.44□□□□□ -1.06
SNX17-208ENST00000493711 RPL39P62891 51 aaKnown RBP8.44□□□□□ -1.06
SNX17-208ENST00000493711 SCGB3A1Q96QR1 104 aa8.44□□□□□ -1.06
SNX17-208ENST00000493711 CSMD3Q7Z407 3707 aa8.44□□□□□ -1.06
SNX17-208ENST00000493711 IBA57-AS1B1ANH7 110 aa8.43□□□□□ -1.06
SNX17-208ENST00000493711 ATP5LO75964 103 aa8.43□□□□□ -1.06
SNX17-208ENST00000493711 ANGP03950 147 aaKnown RBP8.43□□□□□ -1.06
SNX17-208ENST00000493711 NDUFA6P56556 154 aa8.43□□□□□ -1.06
SNX17-208ENST00000493711 LCE3BQ5TA77 95 aa8.43□□□□□ -1.06
SNX17-208ENST00000493711 Q6ZN92 141 aa8.43□□□□□ -1.06
SNX17-208ENST00000493711 ZNF664Q8N3J9 261 aa8.43□□□□□ -1.06
SNX17-208ENST00000493711 TRAV8-3A0A0A6YYJ7 113 aa8.42□□□□□ -1.06
SNX17-208ENST00000493711 IGIPA6NJ69 53 aa8.42□□□□□ -1.06
SNX17-208ENST00000493711 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.42□□□□□ -1.06
SNX17-208ENST00000493711 CCL25O15444 150 aa8.42□□□□□ -1.06
SNX17-208ENST00000493711 CRPP02741 224 aa8.42□□□□□ -1.06
SNX17-208ENST00000493711 PDZD11Q5EBL8 140 aa8.42□□□□□ -1.06
SNX17-208ENST00000493711 Q8N976 141 aa8.42□□□□□ -1.06
SNX17-208ENST00000493711 RMI2Q96E14 147 aa8.42□□□□□ -1.06
SNX17-208ENST00000493711 PACRGQ96M98 296 aaPredicted RBP8.42□□□□□ -1.06
SNX17-208ENST00000493711 CDC42SE2Q9NRR3 84 aa8.42□□□□□ -1.06
SNX17-208ENST00000493711 IGLV4-60A0A075B6I1 120 aa8.41□□□□□ -1.06
SNX17-208ENST00000493711 LINC00310P59036 64 aa8.41□□□□□ -1.06
SNX17-208ENST00000493711 MIAQ16674 131 aa8.41□□□□□ -1.06
SNX17-208ENST00000493711 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
SNX17-208ENST00000493711 PRR34Q9NV39 138 aa8.41□□□□□ -1.06
SNX17-208ENST00000493711 HSPB8Q9UJY1 196 aa8.41□□□□□ -1.06
SNX17-208ENST00000493711 KLK12Q9UKR0 248 aa8.41□□□□□ -1.06
SNX17-208ENST00000493711 A0A096LNJ9 63 aa8.4□□□□□ -1.06
SNX17-208ENST00000493711 TRAV8-4A0A0B4J246 113 aa8.4□□□□□ -1.06
SNX17-208ENST00000493711 REG3AQ06141 175 aa8.4□□□□□ -1.06
SNX17-208ENST00000493711 LINC00269Q8N2A0 174 aa8.4□□□□□ -1.06
SNX17-208ENST00000493711 VCX2Q9H322 139 aa8.4□□□□□ -1.06
SNX17-208ENST00000493711 COX11Q9Y6N1 276 aa8.4□□□□□ -1.06
SNX17-208ENST00000493711 IGLV4-3A0A075B6K6 122 aa8.39□□□□□ -1.07
SNX17-208ENST00000493711 LEPROTL1O95214 131 aa8.39□□□□□ -1.07
SNX17-208ENST00000493711 PMCHL1Q16048 86 aa8.39□□□□□ -1.07
SNX17-208ENST00000493711 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
SNX17-208ENST00000493711 Q6ZR54 194 aa8.39□□□□□ -1.07
SNX17-208ENST00000493711 FAM19A2Q8N3H0 131 aa8.39□□□□□ -1.07
SNX17-208ENST00000493711 UBE2WQ96B02 151 aa8.39□□□□□ -1.07
SNX17-208ENST00000493711 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
SNX17-208ENST00000493711 TM2D2Q9BX73 214 aa8.39□□□□□ -1.07
SNX17-208ENST00000493711 PCLOQ9Y6V0 5065 aa8.38□□□□□ -1.07
SNX17-208ENST00000493711 NUPR1O60356 82 aa8.38□□□□□ -1.07
SNX17-208ENST00000493711 Q6ZUT4 128 aa8.38□□□□□ -1.07
SNX17-208ENST00000493711 STARD9Q9P2P6 4700 aa8.37□□□□□ -1.07
SNX17-208ENST00000493711 HERC2O95714 4834 aa8.37□□□□□ -1.07
SNX17-208ENST00000493711 IFITM10A6NMD0 228 aa8.37□□□□□ -1.07
SNX17-208ENST00000493711 SS18Q15532 418 aa8.37□□□□□ -1.07
SNX17-208ENST00000493711 ENHOQ6UWT2 76 aa8.37□□□□□ -1.07
SNX17-208ENST00000493711 IFI27L1Q96BM0 104 aa8.37□□□□□ -1.07
SNX17-208ENST00000493711 AMELXQ99217 191 aa8.37□□□□□ -1.07
SNX17-208ENST00000493711 S100A2P29034 98 aa8.36□□□□□ -1.07
SNX17-208ENST00000493711 SEC11AP67812 179 aa8.36□□□□□ -1.07
SNX17-208ENST00000493711 PMVKQ15126 192 aa8.36□□□□□ -1.07
SNX17-208ENST00000493711 OPRPNQ99935 248 aaPredicted RBP8.36□□□□□ -1.07
SNX17-208ENST00000493711 C1orf43Q9BWL3 253 aa8.36□□□□□ -1.07
SNX17-208ENST00000493711 LINC00959A0A1B0GUT2 108 aa8.35□□□□□ -1.07
SNX17-208ENST00000493711 M0R2N4 97 aa8.35□□□□□ -1.07
SNX17-208ENST00000493711 PRSS1P07477 247 aa8.35□□□□□ -1.07
SNX17-208ENST00000493711 C1orf134Q5TEV5 83 aa8.35□□□□□ -1.07
SNX17-208ENST00000493711 C6orf223Q8N319 242 aa8.35□□□□□ -1.07
SNX17-208ENST00000493711 BAALCQ8WXS3 180 aa8.35□□□□□ -1.07
SNX17-208ENST00000493711 FAM104AQ969W3 186 aa8.35□□□□□ -1.07
SNX17-208ENST00000493711 MAP1LC3CQ9BXW4 147 aa8.35□□□□□ -1.07
SNX17-208ENST00000493711 KRTAP1-5Q9BYS1 174 aa8.35□□□□□ -1.07
SNX17-208ENST00000493711 CST9LQ9H4G1 147 aa8.35□□□□□ -1.07
SNX17-208ENST00000493711 TRAV13-1A0A0B4J241 112 aa8.34□□□□□ -1.07
SNX17-208ENST00000493711 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms