RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 SBSPONQ8IVN8 264 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 NHP2Q9NX24 153 aaKnown RBP7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 HIVEP1P15822 2718 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 TIRAPP58753 221 aa7.67□□□□□ -1.18
PHACTR4-204ENST00000493669 H3BUT2 72 aa7.66□□□□□ -1.18
PHACTR4-204ENST00000493669 K7EP13 123 aa7.66□□□□□ -1.18
PHACTR4-204ENST00000493669 UBE2D1P51668 147 aa7.66□□□□□ -1.18
PHACTR4-204ENST00000493669 APOC4P55056 127 aa7.66□□□□□ -1.18
PHACTR4-204ENST00000493669 GTF2H5Q6ZYL4 71 aa7.66□□□□□ -1.18
PHACTR4-204ENST00000493669 FAM19A3Q7Z5A8 133 aa7.66□□□□□ -1.18
PHACTR4-204ENST00000493669 FHL2Q14192 279 aa7.66□□□□□ -1.18
PHACTR4-204ENST00000493669 NTM-AS1Q6ZSK4 140 aa7.66□□□□□ -1.18
PHACTR4-204ENST00000493669 X6R8D5 127 aa7.66□□□□□ -1.18
PHACTR4-204ENST00000493669 IGLV5-45A0A087WSX0 123 aa7.65□□□□□ -1.18
PHACTR4-204ENST00000493669 A0A1W2PPM0 123 aa7.65□□□□□ -1.18
PHACTR4-204ENST00000493669 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
PHACTR4-204ENST00000493669 C12orf74Q32Q52 190 aa7.65□□□□□ -1.18
PHACTR4-204ENST00000493669 SPATA3Q8NHX4 192 aa7.65□□□□□ -1.18
PHACTR4-204ENST00000493669 RAB37Q96AX2 223 aa7.65□□□□□ -1.18
PHACTR4-204ENST00000493669 IGHV1-58A0A0C4DH39 117 aa7.65□□□□□ -1.18
PHACTR4-204ENST00000493669 LINC00694P0DN24 101 aa7.65□□□□□ -1.18
PHACTR4-204ENST00000493669 TMEM243Q9BU79 118 aa7.65□□□□□ -1.18
PHACTR4-204ENST00000493669 GEMIN7Q9H840 131 aaKnown RBP7.65□□□□□ -1.18
PHACTR4-204ENST00000493669 GAGE10A6NGK3 116 aa7.64□□□□□ -1.19
PHACTR4-204ENST00000493669 LYRM9A8MSI8 78 aa7.64□□□□□ -1.19
PHACTR4-204ENST00000493669 IGHV3-30-3P0DP02 117 aa7.64□□□□□ -1.19
PHACTR4-204ENST00000493669 FABP2P12104 132 aa7.64□□□□□ -1.19
PHACTR4-204ENST00000493669 SAMD5Q5TGI4 173 aa7.64□□□□□ -1.19
PHACTR4-204ENST00000493669 K7EP34 96 aa7.64□□□□□ -1.19
PHACTR4-204ENST00000493669 RNASE13Q5GAN3 156 aaKnown RBP7.64□□□□□ -1.19
PHACTR4-204ENST00000493669 NIPBLQ6KC79 2804 aaeCLIP7.64□□□□□ -1.19
PHACTR4-204ENST00000493669 K7ERJ3 54 aa7.63□□□□□ -1.19
PHACTR4-204ENST00000493669 HERVK_113P63121 156 aa7.63□□□□□ -1.19
PHACTR4-204ENST00000493669 UBE2L6O14933 153 aa7.63□□□□□ -1.19
PHACTR4-204ENST00000493669 TMEM101Q96IK0 257 aa7.63□□□□□ -1.19
PHACTR4-204ENST00000493669 VSIG2Q96IQ7 327 aa7.63□□□□□ -1.19
PHACTR4-204ENST00000493669 IGLL5B9A064 214 aa7.62□□□□□ -1.19
PHACTR4-204ENST00000493669 TMEM238C9JI98 176 aa7.62□□□□□ -1.19
PHACTR4-204ENST00000493669 IGHV3-30P01768 117 aa7.62□□□□□ -1.19
PHACTR4-204ENST00000493669 IGHV3-30-5P0DP03 117 aa7.62□□□□□ -1.19
PHACTR4-204ENST00000493669 CDC42SE2Q9NRR3 84 aa7.62□□□□□ -1.19
PHACTR4-204ENST00000493669 SPCS1Q9Y6A9 102 aa7.61□□□□□ -1.19
PHACTR4-204ENST00000493669 NOTCH3Q9UM47 2321 aa7.61□□□□□ -1.19
PHACTR4-204ENST00000493669 IGHV3-64A0A075B6Q5 118 aa7.61□□□□□ -1.19
PHACTR4-204ENST00000493669 LOC100131303A0A0U1RQF7 123 aa7.61□□□□□ -1.19
PHACTR4-204ENST00000493669 DEFB130BP0DP73 79 aa7.61□□□□□ -1.19
PHACTR4-204ENST00000493669 DEFB130AP0DP74 79 aa7.61□□□□□ -1.19
PHACTR4-204ENST00000493669 TRBV6-8A0A0A6YYG3 113 aa7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 LINC00242Q5T6M2 205 aa7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 ZFAND6Q6FIF0 208 aa7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 C10orf126Q8N4M7 172 aa7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 A0A0J9YXY3 114 aa7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 NAA38Q9BRA0 125 aaKnown RBP7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 TRAV8-3A0A0A6YYJ7 113 aa7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 MIFP14174 115 aa7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 CDKN2A-AS1Q9UH64 79 aa7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 NDUFA12Q9UI09 145 aa7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 PRO0255Q9UI72 69 aa7.6□□□□□ -1.19
PHACTR4-204ENST00000493669 SPINK8P0C7L1 97 aa7.59□□□□□ -1.19
PHACTR4-204ENST00000493669 DEFB135Q30KP9 77 aa7.59□□□□□ -1.19
PHACTR4-204ENST00000493669 IGLV5-39A0A0G2JS06 123 aa7.59□□□□□ -1.19
PHACTR4-204ENST00000493669 TIMM17BO60830 172 aa7.59□□□□□ -1.19
PHACTR4-204ENST00000493669 FAM222AQ5U5X8 452 aa7.59□□□□□ -1.19
PHACTR4-204ENST00000493669 RPL24P83731 157 aaKnown RBP7.58□□□□□ -1.2
PHACTR4-204ENST00000493669 NDUFA1O15239 70 aa7.58□□□□□ -1.2
PHACTR4-204ENST00000493669 ATP6V0E2Q8NHE4 81 aa7.58□□□□□ -1.2
PHACTR4-204ENST00000493669 SPANXDQ9BXN6 97 aa7.58□□□□□ -1.2
PHACTR4-204ENST00000493669 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
PHACTR4-204ENST00000493669 IGHV4-28A0A0C4DH34 117 aa7.57□□□□□ -1.2
PHACTR4-204ENST00000493669 GYPEP15421 78 aa7.57□□□□□ -1.2
PHACTR4-204ENST00000493669 COX6A2Q02221 97 aa7.57□□□□□ -1.2
PHACTR4-204ENST00000493669 RNF183Q96D59 192 aa7.57□□□□□ -1.2
PHACTR4-204ENST00000493669 TRAV13-1A0A0B4J241 112 aa7.57□□□□□ -1.2
PHACTR4-204ENST00000493669 IGHV4-30-4P0DP06 118 aa7.57□□□□□ -1.2
PHACTR4-204ENST00000493669 LITAFQ99732 161 aa7.57□□□□□ -1.2
PHACTR4-204ENST00000493669 TEP1Q99973 2627 aaKnown RBP7.57□□□□□ -1.2
PHACTR4-204ENST00000493669 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.56□□□□□ -1.2
PHACTR4-204ENST00000493669 Q8NAQ8 132 aa7.56□□□□□ -1.2
PHACTR4-204ENST00000493669 PGPEP1Q9NXJ5 209 aa7.56□□□□□ -1.2
PHACTR4-204ENST00000493669 F8P00451 2351 aa7.56□□□□□ -1.2
PHACTR4-204ENST00000493669 LYRM7Q5U5X0 104 aa7.56□□□□□ -1.2
PHACTR4-204ENST00000493669 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
PHACTR4-204ENST00000493669 A0A0B4J2C4 111 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 SMIM1B2RUZ4 78 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 GAGE6Q13070 117 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 TENM1Q9UKZ4 2725 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 CFC1BP0CG36 223 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 CFC1P0CG37 223 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 DAD1P61803 113 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 KRTAP24-1Q3LI83 254 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 VWFP04275 2813 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 ATRQ13535 2644 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 TEX48A0A1B0GUV7 120 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 F5H768 121 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 PAX4O43316 350 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 APOMO95445 188 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 MIAQ16674 131 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 MUSTN1Q8IVN3 82 aa7.55□□□□□ -1.2
PHACTR4-204ENST00000493669 A4D1N5 150 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms