RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 TMEM78Q5T7P6 136 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 BET1LQ9NYM9 111 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 IER3IP1Q9Y5U9 82 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 IGKV1D-37A0A075B6S9 117 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 C7orf71A4D174 169 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 HMGB3O15347 200 aaKnown RBP1.72□□□□□ -2.13
SNX13-209ENST00000492626 CCL1P22362 96 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 KRTAP10-6P60371 365 aaPredicted RBP1.72□□□□□ -2.13
SNX13-209ENST00000492626 MIAQ16674 131 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 TRAPPC6BQ86SZ2 158 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 NMES1Q9C002 83 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 CKLFQ9UBR5 152 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 MPC1Q9Y5U8 109 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 AKAP6Q13023 2319 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 KNL1Q8NG31 2342 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 A0A1B0GU33 70 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 hADV38S2A0JD32 116 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 IQCF6A8MYZ5 107 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 H3BUT2 72 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 IGLV1-51P01701 117 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 CSN2P05814 226 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 IGKV4-1P06312 121 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 SMIM17P0DL12 118 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 RPS4Y1P22090 263 aaKnown RBP1.72□□□□□ -2.13
SNX13-209ENST00000492626 KRTDAPP60985 99 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 EIF5AP63241 154 aaKnown RBP1.72□□□□□ -2.13
SNX13-209ENST00000492626 OR4B1Q8NGF8 309 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 PP6455Q8WZ26 134 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 HILPDAQ9Y5L2 63 aa1.72□□□□□ -2.13
SNX13-209ENST00000492626 PRR14LQ5THK1 2151 aa1.71□□□□□ -2.13
SNX13-209ENST00000492626 TRAV1-2A0A0B4J238 106 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 A0A0J9YW62 118 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 A0A0J9YX75 114 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 NDUFC2O95298 119 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 SPINK8P0C7L1 97 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 RNASE2P10153 161 aaKnown RBP1.71□□□□□ -2.14
SNX13-209ENST00000492626 CBLN1P23435 193 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 RBM11P57052 281 aaKnown RBP1.71□□□□□ -2.14
SNX13-209ENST00000492626 RHOBP62745 196 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 OR8B8Q15620 311 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 GPHB5Q86YW7 130 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 UBR4Q5T4S7 5183 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 DNAJC13O75165 2243 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 TRAV1-1A0A0B4J248 108 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 H3BUA1 57 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 K7ERJ3 54 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 LST1O00453 97 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 SNAPC5O75971 98 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 HRES1P13985 223 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 CD24P25063 80 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 ETDBQ3ZM63 59 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 EXOC3-AS1Q8N2X6 119 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 ABRACLQ9P1F3 81 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 CUBNO60494 3623 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 TRAV4A0A0B4J268 109 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 MAP1LC3B2A6NCE7 125 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 ZNF737O75373 536 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 GYPBP06028 91 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 DEFA4P12838 97 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 ERHP84090 104 aaKnown RBP1.71□□□□□ -2.14
SNX13-209ENST00000492626 TNFAIP6P98066 277 aaPredicted RBP1.71□□□□□ -2.14
SNX13-209ENST00000492626 EIF5AL1Q6IS14 154 aaKnown RBP1.71□□□□□ -2.14
SNX13-209ENST00000492626 Q8NAQ8 132 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 FAM213BQ8TBF2 198 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 TOMM6Q96B49 74 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 Q96M85 177 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 PSMG3Q9BT73 122 aaPredicted RBP1.71□□□□□ -2.14
SNX13-209ENST00000492626 MAP1LC3BQ9GZQ8 125 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 MUC17Q685J3 4493 aa1.71□□□□□ -2.14
SNX13-209ENST00000492626 TRGV10A0A0A0MS01 117 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 A0A1W2PPM0 123 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 TMEM212A6NML5 194 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 MRPL33O75394 65 aaKnown RBP1.7□□□□□ -2.14
SNX13-209ENST00000492626 XCL1P47992 114 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 RPL18Q07020 188 aaKnown RBP1.7□□□□□ -2.14
SNX13-209ENST00000492626 PMCHL1Q16048 86 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 GLYATL3Q5SZD4 288 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 HRCT1Q6UXD1 115 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 TSKUQ8WUA8 353 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 RNASE7Q9H1E1 156 aaKnown RBP1.7□□□□□ -2.14
SNX13-209ENST00000492626 FNDC10F2Z333 226 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 OVOL1O14753 267 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 PRM2P04554 102 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 AKAIN1P0CW23 69 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 SLC38A11Q08AI6 406 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 MSMO1Q15800 293 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 SPRNQ5BIV9 151 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 RAB37Q96AX2 223 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 DPY30Q9C005 99 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 TRAV38-1A0A0B4J264 116 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 TRAV26-2A0A0B4J265 109 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 J3QLW9 94 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 NCR2O95944 276 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 APOA2P02652 100 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 SCTP09683 121 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 PIRTP0C851 137 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 GDF5OSQ5U4N7 250 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 UPK3BQ9BT76 320 aa1.7□□□□□ -2.14
SNX13-209ENST00000492626 KRTAP2-4Q9BYR9 128 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms