RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 LGALS9CQ6DKI2 356 aa9.36□□□□□ -0.91
PTPRE-210ENST00000492479 Q6ZN92 141 aa9.36□□□□□ -0.91
PTPRE-210ENST00000492479 Q8N976 141 aa9.36□□□□□ -0.91
PTPRE-210ENST00000492479 KRTDAPP60985 99 aa9.35□□□□□ -0.91
PTPRE-210ENST00000492479 RBX1P62877 108 aa9.35□□□□□ -0.91
PTPRE-210ENST00000492479 GAGE6Q13070 117 aa9.35□□□□□ -0.91
PTPRE-210ENST00000492479 ODF1Q14990 250 aa9.35□□□□□ -0.91
PTPRE-210ENST00000492479 PMVKQ15126 192 aa9.35□□□□□ -0.91
PTPRE-210ENST00000492479 AMMECR1LQ6DCA0 310 aa9.35□□□□□ -0.91
PTPRE-210ENST00000492479 FAM19A3Q7Z5A8 133 aa9.35□□□□□ -0.91
PTPRE-210ENST00000492479 OR5A1Q8NGJ0 315 aa9.35□□□□□ -0.91
PTPRE-210ENST00000492479 MUC7Q8TAX7 377 aa9.35□□□□□ -0.91
PTPRE-210ENST00000492479 TMEM101Q96IK0 257 aa9.35□□□□□ -0.91
PTPRE-210ENST00000492479 A0A087WX48 190 aa9.34□□□□□ -0.91
PTPRE-210ENST00000492479 CCL18P55774 89 aa9.34□□□□□ -0.91
PTPRE-210ENST00000492479 MPV17L2Q567V2 206 aa9.34□□□□□ -0.91
PTPRE-210ENST00000492479 LINC01556Q5JQF7 62 aa9.34□□□□□ -0.91
PTPRE-210ENST00000492479 DGAT2L7PQ6IED9 249 aa9.34□□□□□ -0.91
PTPRE-210ENST00000492479 Q6ZUT4 128 aa9.34□□□□□ -0.91
PTPRE-210ENST00000492479 ZNF664Q8N3J9 261 aa9.34□□□□□ -0.91
PTPRE-210ENST00000492479 CST9LQ9H4G1 147 aa9.34□□□□□ -0.91
PTPRE-210ENST00000492479 LINC00588Q9Y4M8 146 aa9.34□□□□□ -0.91
PTPRE-210ENST00000492479 PRSS29PA6NIE9 313 aa9.33□□□□□ -0.92
PTPRE-210ENST00000492479 PRSS1P07477 247 aa9.33□□□□□ -0.92
PTPRE-210ENST00000492479 DNAH10OSP0CZ25 163 aa9.33□□□□□ -0.92
PTPRE-210ENST00000492479 TEX43Q6ZNM6 134 aa9.33□□□□□ -0.92
PTPRE-210ENST00000492479 OPRPNQ99935 248 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-210ENST00000492479 VCX2Q9H322 139 aa9.33□□□□□ -0.92
PTPRE-210ENST00000492479 IGLV4-60A0A075B6I1 120 aa9.32□□□□□ -0.92
PTPRE-210ENST00000492479 C20orf202A1L168 122 aa9.32□□□□□ -0.92
PTPRE-210ENST00000492479 F8VRH5 84 aa9.32□□□□□ -0.92
PTPRE-210ENST00000492479 SMIM6P0DI80 62 aa9.32□□□□□ -0.92
PTPRE-210ENST00000492479 PYY3Q5JQD4 70 aa9.32□□□□□ -0.92
PTPRE-210ENST00000492479 K7EP13 123 aa9.31□□□□□ -0.92
PTPRE-210ENST00000492479 CCL25O15444 150 aa9.31□□□□□ -0.92
PTPRE-210ENST00000492479 NFE4Q86UQ8 179 aa9.31□□□□□ -0.92
PTPRE-210ENST00000492479 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
PTPRE-210ENST00000492479 PRR34Q9NV39 138 aa9.31□□□□□ -0.92
PTPRE-210ENST00000492479 IGLV4-69A0A075B6H9 119 aa9.3□□□□□ -0.92
PTPRE-210ENST00000492479 IGLC3P0DOY3 106 aa9.3□□□□□ -0.92
PTPRE-210ENST00000492479 UBE2D1P51668 147 aa9.3□□□□□ -0.92
PTPRE-210ENST00000492479 C2orf88Q9BSF0 95 aa9.3□□□□□ -0.92
PTPRE-210ENST00000492479 TMEM262E9PQX1 116 aa9.29□□□□□ -0.92
PTPRE-210ENST00000492479 C3orf84H3BNL1 204 aa9.29□□□□□ -0.92
PTPRE-210ENST00000492479 PLNP26678 52 aa9.29□□□□□ -0.92
PTPRE-210ENST00000492479 MRPL35Q9NZE8 188 aaKnown RBP9.29□□□□□ -0.92
PTPRE-210ENST00000492479 CHTOPQ9Y3Y2 248 aaKnown RBP9.29□□□□□ -0.92
PTPRE-210ENST00000492479 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
PTPRE-210ENST00000492479 SIVA1O15304 175 aa9.28□□□□□ -0.92
PTPRE-210ENST00000492479 SEC11AP67812 179 aa9.28□□□□□ -0.92
PTPRE-210ENST00000492479 VPS13DQ5THJ4 4388 aa9.28□□□□□ -0.92
PTPRE-210ENST00000492479 TENM2Q9NT68 2774 aa9.28□□□□□ -0.92
PTPRE-210ENST00000492479 TINCRA0A1B0GVN0 87 aa9.27□□□□□ -0.93
PTPRE-210ENST00000492479 DPM2O94777 84 aa9.27□□□□□ -0.93
PTPRE-210ENST00000492479 SCGB1D1O95968 90 aa9.27□□□□□ -0.93
PTPRE-210ENST00000492479 ZC2HC1BQ5TFG8 222 aa9.27□□□□□ -0.93
PTPRE-210ENST00000492479 Q8N3U1 123 aa9.27□□□□□ -0.93
PTPRE-210ENST00000492479 IGKCP01834 107 aa9.26□□□□□ -0.93
PTPRE-210ENST00000492479 RNASE13Q5GAN3 156 aaKnown RBP9.26□□□□□ -0.93
PTPRE-210ENST00000492479 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
PTPRE-210ENST00000492479 C11orf86A6NJI1 115 aa9.25□□□□□ -0.93
PTPRE-210ENST00000492479 H0Y8G0 127 aa9.25□□□□□ -0.93
PTPRE-210ENST00000492479 ANGP03950 147 aaKnown RBP9.25□□□□□ -0.93
PTPRE-210ENST00000492479 REG3AQ06141 175 aa9.25□□□□□ -0.93
PTPRE-210ENST00000492479 CASC10Q5T4H9 136 aa9.25□□□□□ -0.93
PTPRE-210ENST00000492479 LINC00242Q5T6M2 205 aa9.25□□□□□ -0.93
PTPRE-210ENST00000492479 ZFAND6Q6FIF0 208 aa9.25□□□□□ -0.93
PTPRE-210ENST00000492479 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
PTPRE-210ENST00000492479 C10orf126Q8N4M7 172 aa9.25□□□□□ -0.93
PTPRE-210ENST00000492479 TRAV8-4A0A0B4J246 113 aa9.24□□□□□ -0.93
PTPRE-210ENST00000492479 A0A0J9YXV3 536 aa9.24□□□□□ -0.93
PTPRE-210ENST00000492479 HERVK_113P63121 156 aa9.24□□□□□ -0.93
PTPRE-210ENST00000492479 ENHOQ6UWT2 76 aa9.24□□□□□ -0.93
PTPRE-210ENST00000492479 PMCHL2Q9BQD1 86 aa9.24□□□□□ -0.93
PTPRE-210ENST00000492479 CHAC1Q9BUX1 264 aa9.24□□□□□ -0.93
PTPRE-210ENST00000492479 Q9H8V8 135 aa9.24□□□□□ -0.93
PTPRE-210ENST00000492479 IBA57-AS1B1ANH7 110 aa9.23□□□□□ -0.93
PTPRE-210ENST00000492479 MIAQ16674 131 aa9.23□□□□□ -0.93
PTPRE-210ENST00000492479 LYSTQ99698 3801 aa9.23□□□□□ -0.93
PTPRE-210ENST00000492479 KLK12Q9UKR0 248 aa9.23□□□□□ -0.93
PTPRE-210ENST00000492479 DNAH6Q9C0G6 4158 aa9.23□□□□□ -0.93
PTPRE-210ENST00000492479 DNAH1Q9P2D7 4330 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 TRAV9-2A0A087WT02 112 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 TRAV13-1A0A0B4J241 112 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 IGHV3OR16-9A0A0B4J2B5 98 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 IGHV3-30P01768 117 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 IGHV3-33P01772 117 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 IGHV3-30-3P0DP02 117 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 IGHV3-30-5P0DP03 117 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 ZNF22P17026 224 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-210ENST00000492479 SS18Q15532 418 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 UBE2DNLQ8IWF7 75 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 LINC00518Q8N0U6 118 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 LINC01561Q8N1V8 128 aa9.22□□□□□ -0.93
PTPRE-210ENST00000492479 ALMS1Q8TCU4 4167 aa9.21□□□□□ -0.93
PTPRE-210ENST00000492479 CDPF1Q6NVV7 123 aa9.21□□□□□ -0.94
PTPRE-210ENST00000492479 CD164L2Q6UWJ8 174 aa9.2□□□□□ -0.94
PTPRE-210ENST00000492479 GEMIN7Q9H840 131 aaKnown RBP9.2□□□□□ -0.94
PTPRE-210ENST00000492479 A0A087WZ39 114 aa9.19□□□□□ -0.94
PTPRE-210ENST00000492479 TRAV8-3A0A0A6YYJ7 113 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms