RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	PET117	Q6UWS5	81 aa		10.21	□□□□□ -0.77
COPS7B-222	ENST00000492423	NUPR2	A6NF83	97 aa		10.2	□□□□□ -0.78
COPS7B-222	ENST00000492423	MRPS36	P82909	103 aa	Known RBP	10.2	□□□□□ -0.78
COPS7B-222	ENST00000492423	JOSD1	Q15040	202 aa	Predicted RBP	10.2	□□□□□ -0.78
COPS7B-222	ENST00000492423	LINC01545	Q5VT33	79 aa		10.2	□□□□□ -0.78
COPS7B-222	ENST00000492423		Q6ZN92	141 aa		10.2	□□□□□ -0.78
COPS7B-222	ENST00000492423	APLN	Q9ULZ1	77 aa		10.2	□□□□□ -0.78
COPS7B-222	ENST00000492423	CSDC2	Q9Y534	153 aa	Known RBP	10.2	□□□□□ -0.78
COPS7B-222	ENST00000492423		H0Y8G0	127 aa		10.19	□□□□□ -0.78
COPS7B-222	ENST00000492423	ZNF25	P17030	456 aa	Predicted RBP	10.19	□□□□□ -0.78
COPS7B-222	ENST00000492423	ODF1	Q14990	250 aa		10.19	□□□□□ -0.78
COPS7B-222	ENST00000492423	MPV17L2	Q567V2	206 aa		10.19	□□□□□ -0.78
COPS7B-222	ENST00000492423	RNASE13	Q5GAN3	156 aa	Known RBP	10.19	□□□□□ -0.78
COPS7B-222	ENST00000492423	AMMECR1L	Q6DCA0	310 aa		10.19	□□□□□ -0.78
COPS7B-222	ENST00000492423	AMELX	Q99217	191 aa		10.19	□□□□□ -0.78
COPS7B-222	ENST00000492423	IGLV4-60	A0A075B6I1	120 aa		10.18	□□□□□ -0.78
COPS7B-222	ENST00000492423	TRAV12-1	A0A0B4J245	112 aa		10.18	□□□□□ -0.78
COPS7B-222	ENST00000492423	PRSS1	P07477	247 aa		10.18	□□□□□ -0.78
COPS7B-222	ENST00000492423	SMAGP	Q0VAQ4	97 aa		10.18	□□□□□ -0.78
COPS7B-222	ENST00000492423	PMVK	Q15126	192 aa		10.18	□□□□□ -0.78
COPS7B-222	ENST00000492423	LGALS9C	Q6DKI2	356 aa		10.18	□□□□□ -0.78
COPS7B-222	ENST00000492423	WFDC10B	Q8IUB3	73 aa		10.18	□□□□□ -0.78
COPS7B-222	ENST00000492423	STAB2	Q8WWQ8	2551 aa		10.18	□□□□□ -0.78
COPS7B-222	ENST00000492423		A0A087WX48	190 aa		10.17	□□□□□ -0.78
COPS7B-222	ENST00000492423	RBX1	P62877	108 aa		10.17	□□□□□ -0.78
COPS7B-222	ENST00000492423	CDPF1	Q6NVV7	123 aa		10.17	□□□□□ -0.78
COPS7B-222	ENST00000492423	OR5A1	Q8NGJ0	315 aa		10.17	□□□□□ -0.78
COPS7B-222	ENST00000492423	CDC42SE2	Q9NRR3	84 aa		10.17	□□□□□ -0.78
COPS7B-222	ENST00000492423	TRAV8-6	A0A0B4J262	113 aa		10.16	□□□□□ -0.78
COPS7B-222	ENST00000492423		A0A1B0GUV1	79 aa		10.16	□□□□□ -0.78
COPS7B-222	ENST00000492423	PRSS29P	A6NIE9	313 aa		10.16	□□□□□ -0.78
COPS7B-222	ENST00000492423	DGAT2L7P	Q6IED9	249 aa		10.16	□□□□□ -0.78
COPS7B-222	ENST00000492423	ZNF664	Q8N3J9	261 aa		10.16	□□□□□ -0.78
COPS7B-222	ENST00000492423	PMCHL2	Q9BQD1	86 aa		10.16	□□□□□ -0.78
COPS7B-222	ENST00000492423	CST9L	Q9H4G1	147 aa		10.16	□□□□□ -0.78
COPS7B-222	ENST00000492423	KLK5	Q9Y337	293 aa	Predicted RBP	10.16	□□□□□ -0.78
COPS7B-222	ENST00000492423	MRPS16	Q9Y3D3	137 aa	Known RBP	10.16	□□□□□ -0.78
COPS7B-222	ENST00000492423	LINC00588	Q9Y4M8	146 aa		10.16	□□□□□ -0.78
COPS7B-222	ENST00000492423	TMEM262	E9PQX1	116 aa		10.15	□□□□□ -0.78
COPS7B-222	ENST00000492423	SCGB1D1	O95968	90 aa		10.15	□□□□□ -0.78
COPS7B-222	ENST00000492423	SMIM6	P0DI80	62 aa		10.15	□□□□□ -0.78
COPS7B-222	ENST00000492423	PKIA	P61925	76 aa		10.15	□□□□□ -0.78
COPS7B-222	ENST00000492423	PAPPA-AS1	Q5QFB9	102 aa		10.15	□□□□□ -0.78
COPS7B-222	ENST00000492423	TEX43	Q6ZNM6	134 aa		10.15	□□□□□ -0.78
COPS7B-222	ENST00000492423	TMEM101	Q96IK0	257 aa		10.15	□□□□□ -0.78
COPS7B-222	ENST00000492423	IGLV4-69	A0A075B6H9	119 aa		10.14	□□□□□ -0.79
COPS7B-222	ENST00000492423	C20orf202	A1L168	122 aa		10.14	□□□□□ -0.79
COPS7B-222	ENST00000492423		F8VRH5	84 aa		10.14	□□□□□ -0.79
COPS7B-222	ENST00000492423	ZFAND6	Q6FIF0	208 aa		10.14	□□□□□ -0.79
COPS7B-222	ENST00000492423	MUC7	Q8TAX7	377 aa		10.14	□□□□□ -0.79
COPS7B-222	ENST00000492423	VCX2	Q9H322	139 aa		10.14	□□□□□ -0.79
COPS7B-222	ENST00000492423	MRPL35	Q9NZE8	188 aa	Known RBP	10.14	□□□□□ -0.79
COPS7B-222	ENST00000492423	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.14	□□□□□ -0.79
COPS7B-222	ENST00000492423	CCL18	P55774	89 aa		10.13	□□□□□ -0.79
COPS7B-222	ENST00000492423	WWC2-AS2	Q96NR7	200 aa		10.13	□□□□□ -0.79
COPS7B-222	ENST00000492423	UBE2D1	P51668	147 aa		10.12	□□□□□ -0.79
COPS7B-222	ENST00000492423	TCTA	P57738	103 aa		10.12	□□□□□ -0.79
COPS7B-222	ENST00000492423	ATOH7	Q8N100	152 aa		10.12	□□□□□ -0.79
COPS7B-222	ENST00000492423	UPK3B	Q9BT76	320 aa		10.12	□□□□□ -0.79
COPS7B-222	ENST00000492423	IGHV3-30	P01768	117 aa		10.11	□□□□□ -0.79
COPS7B-222	ENST00000492423	IGHV3-33	P01772	117 aa		10.11	□□□□□ -0.79
COPS7B-222	ENST00000492423	IGLC3	P0DOY3	106 aa		10.11	□□□□□ -0.79
COPS7B-222	ENST00000492423	IGHV3-30-3	P0DP02	117 aa		10.11	□□□□□ -0.79
COPS7B-222	ENST00000492423	IGHV3-30-5	P0DP03	117 aa		10.11	□□□□□ -0.79
COPS7B-222	ENST00000492423	C2orf88	Q9BSF0	95 aa		10.11	□□□□□ -0.79
COPS7B-222	ENST00000492423		A0A0J9YXV3	536 aa		10.1	□□□□□ -0.79
COPS7B-222	ENST00000492423	C11orf86	A6NJI1	115 aa		10.1	□□□□□ -0.79
COPS7B-222	ENST00000492423	DPM2	O94777	84 aa		10.1	□□□□□ -0.79
COPS7B-222	ENST00000492423	LINC01556	Q5JQF7	62 aa		10.1	□□□□□ -0.79
COPS7B-222	ENST00000492423	FAM19A3	Q7Z5A8	133 aa		10.1	□□□□□ -0.79
COPS7B-222	ENST00000492423	NFE4	Q86UQ8	179 aa		10.1	□□□□□ -0.79
COPS7B-222	ENST00000492423	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.1	□□□□□ -0.79
COPS7B-222	ENST00000492423	IGKC	P01834	107 aa		10.09	□□□□□ -0.79
COPS7B-222	ENST00000492423	ANG	P03950	147 aa	Known RBP	10.09	□□□□□ -0.79
COPS7B-222	ENST00000492423	DNAH10OS	P0CZ25	163 aa		10.09	□□□□□ -0.79
COPS7B-222	ENST00000492423	CLPSL2	Q6UWE3	100 aa		10.09	□□□□□ -0.79
COPS7B-222	ENST00000492423	TRAV13-1	A0A0B4J241	112 aa		10.08	□□□□□ -0.8
COPS7B-222	ENST00000492423	MAJIN	Q3KP22	176 aa		10.08	□□□□□ -0.8
COPS7B-222	ENST00000492423	LINC00518	Q8N0U6	118 aa		10.08	□□□□□ -0.8
COPS7B-222	ENST00000492423	CHAC1	Q9BUX1	264 aa		10.08	□□□□□ -0.8
COPS7B-222	ENST00000492423	IGKV3OR2-268	A0A0C4DH90	116 aa		10.07	□□□□□ -0.8
COPS7B-222	ENST00000492423	LINC00959	A0A1B0GUT2	108 aa		10.07	□□□□□ -0.8
COPS7B-222	ENST00000492423	TINCR	A0A1B0GVN0	87 aa		10.07	□□□□□ -0.8
COPS7B-222	ENST00000492423	SIVA1	O15304	175 aa		10.07	□□□□□ -0.8
COPS7B-222	ENST00000492423	PLN	P26678	52 aa		10.07	□□□□□ -0.8
COPS7B-222	ENST00000492423	LINC00242	Q5T6M2	205 aa		10.07	□□□□□ -0.8
COPS7B-222	ENST00000492423	LINC00269	Q8N2A0	174 aa		10.07	□□□□□ -0.8
COPS7B-222	ENST00000492423	C12orf57	Q99622	126 aa		10.07	□□□□□ -0.8
COPS7B-222	ENST00000492423	PRR34	Q9NV39	138 aa		10.07	□□□□□ -0.8
COPS7B-222	ENST00000492423	KLK12	Q9UKR0	248 aa		10.07	□□□□□ -0.8
COPS7B-222	ENST00000492423	hDV102S1	A0JD36	115 aa		10.06	□□□□□ -0.8
COPS7B-222	ENST00000492423	ZNF22	P17026	224 aa	Predicted RBP	10.06	□□□□□ -0.8
COPS7B-222	ENST00000492423	COX6A2	Q02221	97 aa		10.06	□□□□□ -0.8
COPS7B-222	ENST00000492423	TNP2	Q05952	138 aa		10.06	□□□□□ -0.8
COPS7B-222	ENST00000492423	REG3A	Q06141	175 aa		10.06	□□□□□ -0.8
COPS7B-222	ENST00000492423	LCE3B	Q5TA77	95 aa		10.06	□□□□□ -0.8
COPS7B-222	ENST00000492423	UBE2DNL	Q8IWF7	75 aa		10.06	□□□□□ -0.8
COPS7B-222	ENST00000492423	IGLV5-45	A0A087WSX0	123 aa		10.05	□□□□□ -0.8
COPS7B-222	ENST00000492423	TRAV9-2	A0A087WT02	112 aa		10.05	□□□□□ -0.8
COPS7B-222	ENST00000492423	ENHO	Q6UWT2	76 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms