RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-208ENST00000489611 IGKV2-29A2NJV5 120 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-208ENST00000489611 H7C423 109 aa10.72□□□□□ -0.69
COL9A1-208ENST00000489611 GIG44P09565 113 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-208ENST00000489611 Q6ZTI0 123 aa10.72□□□□□ -0.69
COL9A1-208ENST00000489611 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-208ENST00000489611 VSIG2Q96IQ7 327 aa10.72□□□□□ -0.69
COL9A1-208ENST00000489611 Q9UF83 564 aa10.72□□□□□ -0.69
COL9A1-208ENST00000489611 TRBV6-4A0A1B0GX49 114 aa10.71□□□□□ -0.69
COL9A1-208ENST00000489611 INSL3P51460 131 aa10.71□□□□□ -0.69
COL9A1-208ENST00000489611 UBE2D3P61077 147 aa10.71□□□□□ -0.69
COL9A1-208ENST00000489611 UBE2D2P62837 147 aa10.71□□□□□ -0.69
COL9A1-208ENST00000489611 HERVK_113P63121 156 aa10.71□□□□□ -0.69
COL9A1-208ENST00000489611 CSNK1G2-AS1Q8NCQ2 148 aa10.71□□□□□ -0.69
COL9A1-208ENST00000489611 WNK1Q9H4A3 2382 aa10.71□□□□□ -0.7
COL9A1-208ENST00000489611 TRBV20-1A0A075B6N2 111 aa10.7□□□□□ -0.7
COL9A1-208ENST00000489611 CEMP1Q6PRD7 247 aaPredicted RBP10.7□□□□□ -0.7
COL9A1-208ENST00000489611 Q6ZUT4 128 aa10.7□□□□□ -0.7
COL9A1-208ENST00000489611 C10orf126Q8N4M7 172 aa10.7□□□□□ -0.7
COL9A1-208ENST00000489611 NOP10Q9NPE3 64 aaKnown RBP10.7□□□□□ -0.7
COL9A1-208ENST00000489611 PRO1854Q9UHT4 67 aa10.7□□□□□ -0.7
COL9A1-208ENST00000489611 SETD2Q9BYW2 2564 aaPredicted RBP10.7□□□□□ -0.7
COL9A1-208ENST00000489611 A0A0B4J2C4 111 aa10.7□□□□□ -0.7
COL9A1-208ENST00000489611 IGHV3-38A0A0C4DH36 116 aa10.7□□□□□ -0.7
COL9A1-208ENST00000489611 A0A0J9YXY3 114 aa10.7□□□□□ -0.7
COL9A1-208ENST00000489611 PF4P02776 101 aa10.7□□□□□ -0.7
COL9A1-208ENST00000489611 C2CD3Q4AC94 2353 aa10.69□□□□□ -0.7
COL9A1-208ENST00000489611 TIMM17BO60830 172 aa10.69□□□□□ -0.7
COL9A1-208ENST00000489611 TSPAN13O95857 204 aa10.69□□□□□ -0.7
COL9A1-208ENST00000489611 CFC1BP0CG36 223 aa10.69□□□□□ -0.7
COL9A1-208ENST00000489611 CFC1P0CG37 223 aa10.69□□□□□ -0.7
COL9A1-208ENST00000489611 GAGE13Q4V321 117 aa10.69□□□□□ -0.7
COL9A1-208ENST00000489611 RNF183Q96D59 192 aa10.69□□□□□ -0.7
COL9A1-208ENST00000489611 VPS25Q9BRG1 176 aa10.69□□□□□ -0.7
COL9A1-208ENST00000489611 TRGV2A0A075B6R0 118 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 PLAC8L1A1L4L8 177 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 G3V4G9 280 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 APOMO95445 188 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 ZFAND6Q6FIF0 208 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 MAST4O15021 2626 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 H3BMG7 143 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 J3QR89 54 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 RNF151Q2KHN1 245 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 SPANXDQ9BXN6 97 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 SPANXCQ9NY87 97 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 NDUFA12Q9UI09 145 aa10.68□□□□□ -0.7
COL9A1-208ENST00000489611 IGHV3-64A0A075B6Q5 118 aa10.67□□□□□ -0.7
COL9A1-208ENST00000489611 RPL35AP18077 110 aaKnown RBP10.67□□□□□ -0.7
COL9A1-208ENST00000489611 LINC00482Q8N8I6 264 aa10.67□□□□□ -0.7
COL9A1-208ENST00000489611 SBSPONQ8IVN8 264 aa10.66□□□□□ -0.7
COL9A1-208ENST00000489611 A4D1N5 150 aa10.66□□□□□ -0.7
COL9A1-208ENST00000489611 TMEM101Q96IK0 257 aa10.66□□□□□ -0.7
COL9A1-208ENST00000489611 IFITM1P13164 125 aa10.65□□□□□ -0.7
COL9A1-208ENST00000489611 C21orf62-AS1Q17RA5 79 aa10.65□□□□□ -0.7
COL9A1-208ENST00000489611 RNASE13Q5GAN3 156 aaKnown RBP10.65□□□□□ -0.7
COL9A1-208ENST00000489611 TMEM243Q9BU79 118 aa10.65□□□□□ -0.7
COL9A1-208ENST00000489611 TRAV8-3A0A0A6YYJ7 113 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 TRGV4A0A0C4DH28 118 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 LOC107984156A0A0G2JMH3 177 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 SMIM9A6NGZ8 99 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 UBE2L6O14933 153 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 GAGE7O76087 117 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 GAGE12FP0CL80 117 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 GAGE12GP0CL81 117 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 GAGE12IP0CL82 117 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 MUSTN1Q8IVN3 82 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 ARL17AQ8IVW1 177 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 KIR2DL5BQ8NHK3 375 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 COPS9Q8WXC6 57 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 WFDC10AQ9H1F0 79 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 GAGE12JA6NER3 117 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 NDUFA1O15239 70 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 GAGE4Q13068 117 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 GAGE5Q13069 117 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 CIRBPQ14011 172 aaKnown RBP10.64□□□□□ -0.71
COL9A1-208ENST00000489611 NTM-AS1Q6ZSK4 140 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 LITAFQ99732 161 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 CDKN2A-AS1Q9UH64 79 aa10.64□□□□□ -0.71
COL9A1-208ENST00000489611 JMJD1CQ15652 2540 aa10.63□□□□□ -0.71
COL9A1-208ENST00000489611 IGLV5-39A0A0G2JS06 123 aa10.63□□□□□ -0.71
COL9A1-208ENST00000489611 SPINK8P0C7L1 97 aa10.63□□□□□ -0.71
COL9A1-208ENST00000489611 MIAQ16674 131 aa10.63□□□□□ -0.71
COL9A1-208ENST00000489611 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
COL9A1-208ENST00000489611 CDC42SE2Q9NRR3 84 aa10.63□□□□□ -0.71
COL9A1-208ENST00000489611 PRO0461Q9UI25 63 aa10.63□□□□□ -0.71
COL9A1-208ENST00000489611 NIPBLQ6KC79 2804 aaeCLIP10.62□□□□□ -0.71
COL9A1-208ENST00000489611 PCP4P48539 62 aa10.62□□□□□ -0.71
COL9A1-208ENST00000489611 LINC00242Q5T6M2 205 aa10.62□□□□□ -0.71
COL9A1-208ENST00000489611 ERG28Q9UKR5 140 aa10.62□□□□□ -0.71
COL9A1-208ENST00000489611 ATP6V0E2Q8NHE4 81 aa10.62□□□□□ -0.71
COL9A1-208ENST00000489611 TEP1Q99973 2627 aaKnown RBP10.62□□□□□ -0.71
COL9A1-208ENST00000489611 IGHV3-33P01772 117 aa10.61□□□□□ -0.71
COL9A1-208ENST00000489611 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
COL9A1-208ENST00000489611 WFDC2Q14508 124 aa10.6□□□□□ -0.71
COL9A1-208ENST00000489611 KRTAP24-1Q3LI83 254 aa10.6□□□□□ -0.71
COL9A1-208ENST00000489611 LINC00612Q8N6U2 182 aa10.6□□□□□ -0.71
COL9A1-208ENST00000489611 TEX48A0A1B0GUV7 120 aa10.6□□□□□ -0.71
COL9A1-208ENST00000489611 PSMB2P49721 201 aa10.6□□□□□ -0.71
COL9A1-208ENST00000489611 FHL2Q14192 279 aa10.6□□□□□ -0.71
COL9A1-208ENST00000489611 PRIMA1Q86XR5 153 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms