RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 A0A0J9YY99 117 aa13.46□□□□□ -0.26
POLR2J3-205ENST00000489144 IGHV3-33P01772 117 aa13.46□□□□□ -0.26
POLR2J3-205ENST00000489144 PRR9Q5T870 116 aa13.46□□□□□ -0.26
POLR2J3-205ENST00000489144 C1orf43Q9BWL3 253 aa13.46□□□□□ -0.26
POLR2J3-205ENST00000489144 DCANP1Q8TF63 244 aa13.45□□□□□ -0.26
POLR2J3-205ENST00000489144 LAGE3Q14657 143 aa13.45□□□□□ -0.26
POLR2J3-205ENST00000489144 ZNF22P17026 224 aaPredicted RBP13.44□□□□□ -0.26
POLR2J3-205ENST00000489144 KRTAP10-3P60369 221 aa13.44□□□□□ -0.26
POLR2J3-205ENST00000489144 HERVK_113P61574 105 aa13.44□□□□□ -0.26
POLR2J3-205ENST00000489144 PYGO1Q9Y3Y4 419 aa13.44□□□□□ -0.26
POLR2J3-205ENST00000489144 RS1O15537 224 aa13.43□□□□□ -0.26
POLR2J3-205ENST00000489144 NOTCH3Q9UM47 2321 aa13.43□□□□□ -0.26
POLR2J3-205ENST00000489144 ACYP1P07311 99 aa13.43□□□□□ -0.26
POLR2J3-205ENST00000489144 SPRY2O43597 315 aa13.42□□□□□ -0.26
POLR2J3-205ENST00000489144 H3BT86 120 aa13.42□□□□□ -0.26
POLR2J3-205ENST00000489144 FAM19A4Q96LR4 140 aa13.42□□□□□ -0.26
POLR2J3-205ENST00000489144 C11orf21Q9P2W6 132 aa13.42□□□□□ -0.26
POLR2J3-205ENST00000489144 TRRAPQ9Y4A5 3859 aa13.41□□□□□ -0.26
POLR2J3-205ENST00000489144 CCL24O00175 119 aa13.41□□□□□ -0.26
POLR2J3-205ENST00000489144 DSCR8Q96T75 97 aa13.41□□□□□ -0.26
POLR2J3-205ENST00000489144 LINC00643Q86TS7 51 aa13.41□□□□□ -0.26
POLR2J3-205ENST00000489144 RPL35AP18077 110 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-205ENST00000489144 TMEM61Q8N0U2 210 aa13.4□□□□□ -0.26
POLR2J3-205ENST00000489144 SLC25A29Q8N8R3 303 aa13.4□□□□□ -0.26
POLR2J3-205ENST00000489144 C16orf95Q9H693 158 aa13.4□□□□□ -0.26
POLR2J3-205ENST00000489144 GATA1P15976 413 aaPredicted RBP13.4□□□□□ -0.26
POLR2J3-205ENST00000489144 TMEM263Q8WUH6 116 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-205ENST00000489144 CYSTM1Q9H1C7 97 aa13.4□□□□□ -0.26
POLR2J3-205ENST00000489144 H7C423 109 aa13.39□□□□□ -0.27
POLR2J3-205ENST00000489144 CXCL5P42830 114 aa13.39□□□□□ -0.27
POLR2J3-205ENST00000489144 PROK1P58294 105 aa13.39□□□□□ -0.27
POLR2J3-205ENST00000489144 C9orf47Q6ZRZ4 202 aa13.39□□□□□ -0.27
POLR2J3-205ENST00000489144 ZNF575Q86XF7 245 aa13.39□□□□□ -0.27
POLR2J3-205ENST00000489144 DYNLRB2Q8TF09 96 aa13.38□□□□□ -0.27
POLR2J3-205ENST00000489144 TRAV13-1A0A0B4J241 112 aa13.38□□□□□ -0.27
POLR2J3-205ENST00000489144 ATOX1O00244 68 aa13.38□□□□□ -0.27
POLR2J3-205ENST00000489144 C5orf38Q86SI9 138 aa13.38□□□□□ -0.27
POLR2J3-205ENST00000489144 NEXN-AS1Q8NBZ9 246 aa13.38□□□□□ -0.27
POLR2J3-205ENST00000489144 MSRB1Q9NZV6 116 aa13.38□□□□□ -0.27
POLR2J3-205ENST00000489144 A0A0B4J2C4 111 aa13.37□□□□□ -0.27
POLR2J3-205ENST00000489144 H7C2G1 150 aa13.37□□□□□ -0.27
POLR2J3-205ENST00000489144 RNASE4P34096 147 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-205ENST00000489144 MRPL53Q96EL3 112 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-205ENST00000489144 K7EQG2 157 aa13.37□□□□□ -0.27
POLR2J3-205ENST00000489144 V9GYY9 64 aa13.37□□□□□ -0.27
POLR2J3-205ENST00000489144 TRAV12-2A0A075B6T6 113 aa13.36□□□□□ -0.27
POLR2J3-205ENST00000489144 KNCNA6PVL3 124 aa13.36□□□□□ -0.27
POLR2J3-205ENST00000489144 LINC00336Q6ZUF6 198 aa13.36□□□□□ -0.27
POLR2J3-205ENST00000489144 TRBV30A0A0K0K1B3 111 aa13.36□□□□□ -0.27
POLR2J3-205ENST00000489144 ADARB2-AS1A8MUL3 147 aa13.36□□□□□ -0.27
POLR2J3-205ENST00000489144 EIF4EBP3O60516 100 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-205ENST00000489144 PEMTQ9UBM1 199 aa13.36□□□□□ -0.27
POLR2J3-205ENST00000489144 IGKV3D-20A0A0C4DH25 116 aa13.35□□□□□ -0.27
POLR2J3-205ENST00000489144 ZNF415Q09FC8 603 aa13.35□□□□□ -0.27
POLR2J3-205ENST00000489144 Q1RN00 199 aa13.35□□□□□ -0.27
POLR2J3-205ENST00000489144 ZFAND2AQ8N6M9 145 aa13.35□□□□□ -0.27
POLR2J3-205ENST00000489144 PKIGQ9Y2B9 76 aa13.35□□□□□ -0.27
POLR2J3-205ENST00000489144 APRG1Q8IVJ8 170 aa13.34□□□□□ -0.27
POLR2J3-205ENST00000489144 CNFNQ9BYD5 112 aa13.34□□□□□ -0.27
POLR2J3-205ENST00000489144 DEFB131AP59861 70 aa13.34□□□□□ -0.27
POLR2J3-205ENST00000489144 SNRPD3P62318 126 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-205ENST00000489144 HIST1H4AP62805 103 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-205ENST00000489144 SCGB3A1Q96QR1 104 aa13.34□□□□□ -0.27
POLR2J3-205ENST00000489144 SPATA3Q8NHX4 192 aa13.33□□□□□ -0.27
POLR2J3-205ENST00000489144 PFN2P35080 140 aa13.33□□□□□ -0.28
POLR2J3-205ENST00000489144 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-205ENST00000489144 SMCR5Q8TEV8 140 aa13.33□□□□□ -0.28
POLR2J3-205ENST00000489144 DEFB114Q30KQ6 69 aa13.32□□□□□ -0.28
POLR2J3-205ENST00000489144 SPINK13Q1W4C9 94 aa13.32□□□□□ -0.28
POLR2J3-205ENST00000489144 COX8CQ7Z4L0 72 aa13.32□□□□□ -0.28
POLR2J3-205ENST00000489144 FBN1P35555 2871 aaKnown RBP13.32□□□□□ -0.28
POLR2J3-205ENST00000489144 J3QQQ9 107 aa13.31□□□□□ -0.28
POLR2J3-205ENST00000489144 TRAV12-3A0A0B4J271 114 aa13.31□□□□□ -0.28
POLR2J3-205ENST00000489144 DPH3P1Q9H4G8 78 aa13.31□□□□□ -0.28
POLR2J3-205ENST00000489144 TRIAP1O43715 76 aa13.3□□□□□ -0.28
POLR2J3-205ENST00000489144 A0A0J9YX75 114 aa13.3□□□□□ -0.28
POLR2J3-205ENST00000489144 NRACQ8N912 160 aa13.3□□□□□ -0.28
POLR2J3-205ENST00000489144 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.29□□□□□ -0.28
POLR2J3-205ENST00000489144 SDIM1Q6ZPB5 146 aa13.29□□□□□ -0.28
POLR2J3-205ENST00000489144 TOMM6Q96B49 74 aa13.29□□□□□ -0.28
POLR2J3-205ENST00000489144 UPK3BQ9BT76 320 aa13.29□□□□□ -0.28
POLR2J3-205ENST00000489144 GNRH2O43555 120 aa13.29□□□□□ -0.28
POLR2J3-205ENST00000489144 PRM2P04554 102 aa13.28□□□□□ -0.28
POLR2J3-205ENST00000489144 C9orf85Q96MD7 179 aa13.28□□□□□ -0.28
POLR2J3-205ENST00000489144 WFDC10AQ9H1F0 79 aa13.27□□□□□ -0.28
POLR2J3-205ENST00000489144 HTN1P15515 57 aa13.27□□□□□ -0.29
POLR2J3-205ENST00000489144 ORMDL2Q53FV1 153 aa13.27□□□□□ -0.29
POLR2J3-205ENST00000489144 MAP6D1Q9H9H5 199 aa13.27□□□□□ -0.29
POLR2J3-205ENST00000489144 TMEM223A0PJW6 202 aa13.26□□□□□ -0.29
POLR2J3-205ENST00000489144 SERP2Q8N6R1 65 aa13.26□□□□□ -0.29
POLR2J3-205ENST00000489144 C14orf178Q8N769 122 aaPredicted RBP13.26□□□□□ -0.29
POLR2J3-205ENST00000489144 STAB1Q9NY15 2570 aa13.26□□□□□ -0.29
POLR2J3-205ENST00000489144 RBMY1BA6NDE4 496 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-205ENST00000489144 RBMY1EA6NEQ0 496 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-205ENST00000489144 RBMY1DP0C7P1 496 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-205ENST00000489144 PF4P02776 101 aa13.25□□□□□ -0.29
POLR2J3-205ENST00000489144 COX6CP09669 75 aa13.25□□□□□ -0.29
POLR2J3-205ENST00000489144 RPL18AQ02543 176 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-205ENST00000489144 PAPPA-AS1Q5QFB9 102 aa13.25□□□□□ -0.29
POLR2J3-205ENST00000489144 TRAV21A0A0B4J279 112 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms