RNA–Protein interactions for RNA: ENST00000488620.5

RGS3-223, Transcript of regulator of G protein signaling 3, human

TSL 1 (best)

Gene RGS3, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RGS3-223	ENST00000488620	TRGV4	A0A0C4DH28	118 aa		13.81	□□□□□ -0.2
RGS3-223	ENST00000488620	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.81	□□□□□ -0.2
RGS3-223	ENST00000488620	SBSPON	Q8IVN8	264 aa		13.81	□□□□□ -0.2
RGS3-223	ENST00000488620	HIVEP1	P15822	2718 aa		13.81	□□□□□ -0.2
RGS3-223	ENST00000488620	UBE2D1	P51668	147 aa		13.81	□□□□□ -0.2
RGS3-223	ENST00000488620	APOC4	P55056	127 aa		13.81	□□□□□ -0.2
RGS3-223	ENST00000488620		Q6ZUT4	128 aa		13.81	□□□□□ -0.2
RGS3-223	ENST00000488620	GAGE12J	A6NER3	117 aa		13.8	□□□□□ -0.2
RGS3-223	ENST00000488620		H3BUT2	72 aa		13.8	□□□□□ -0.2
RGS3-223	ENST00000488620	TSPEAR-AS2	P59090	65 aa		13.8	□□□□□ -0.2
RGS3-223	ENST00000488620	GAGE4	Q13068	117 aa		13.8	□□□□□ -0.2
RGS3-223	ENST00000488620	GAGE5	Q13069	117 aa		13.8	□□□□□ -0.2
RGS3-223	ENST00000488620	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
RGS3-223	ENST00000488620	FHL2	Q14192	279 aa		13.8	□□□□□ -0.2
RGS3-223	ENST00000488620	GAGE13	Q4V321	117 aa		13.8	□□□□□ -0.2
RGS3-223	ENST00000488620	NTM-AS1	Q6ZSK4	140 aa		13.8	□□□□□ -0.2
RGS3-223	ENST00000488620	NHP2	Q9NX24	153 aa	Known RBP	13.8	□□□□□ -0.2
RGS3-223	ENST00000488620	NOTCH3	Q9UM47	2321 aa		13.79	□□□□□ -0.2
RGS3-223	ENST00000488620	IGLV5-45	A0A087WSX0	123 aa		13.79	□□□□□ -0.2
RGS3-223	ENST00000488620	C12orf74	Q32Q52	190 aa		13.79	□□□□□ -0.2
RGS3-223	ENST00000488620		X6R8D5	127 aa		13.79	□□□□□ -0.2
RGS3-223	ENST00000488620	IGHV1-58	A0A0C4DH39	117 aa		13.78	□□□□□ -0.2
RGS3-223	ENST00000488620		A0A1W2PPM0	123 aa		13.78	□□□□□ -0.2
RGS3-223	ENST00000488620	GAGE10	A6NGK3	116 aa		13.78	□□□□□ -0.2
RGS3-223	ENST00000488620		K7EP13	123 aa		13.78	□□□□□ -0.2
RGS3-223	ENST00000488620	RAB37	Q96AX2	223 aa		13.78	□□□□□ -0.2
RGS3-223	ENST00000488620	GEMIN7	Q9H840	131 aa	Known RBP	13.78	□□□□□ -0.2
RGS3-223	ENST00000488620	LYRM9	A8MSI8	78 aa		13.77	□□□□□ -0.21
RGS3-223	ENST00000488620	IGHV3-30-3	P0DP02	117 aa		13.77	□□□□□ -0.21
RGS3-223	ENST00000488620	FABP2	P12104	132 aa		13.77	□□□□□ -0.21
RGS3-223	ENST00000488620	SAMD5	Q5TGI4	173 aa		13.77	□□□□□ -0.21
RGS3-223	ENST00000488620	TMEM243	Q9BU79	118 aa		13.77	□□□□□ -0.21
RGS3-223	ENST00000488620	LINC00694	P0DN24	101 aa		13.76	□□□□□ -0.21
RGS3-223	ENST00000488620	HERVK_113	P63121	156 aa		13.76	□□□□□ -0.21
RGS3-223	ENST00000488620		K7EP34	96 aa		13.75	□□□□□ -0.21
RGS3-223	ENST00000488620	SPATA3	Q8NHX4	192 aa		13.75	□□□□□ -0.21
RGS3-223	ENST00000488620	VSIG2	Q96IQ7	327 aa		13.75	□□□□□ -0.21
RGS3-223	ENST00000488620	TMEM101	Q96IK0	257 aa		13.74	□□□□□ -0.21
RGS3-223	ENST00000488620	CDC42SE2	Q9NRR3	84 aa		13.74	□□□□□ -0.21
RGS3-223	ENST00000488620	UBE2L6	O14933	153 aa		13.73	□□□□□ -0.21
RGS3-223	ENST00000488620	IGHV3-30	P01768	117 aa		13.73	□□□□□ -0.21
RGS3-223	ENST00000488620	IGHV3-30-5	P0DP03	117 aa		13.73	□□□□□ -0.21
RGS3-223	ENST00000488620	RNASE13	Q5GAN3	156 aa	Known RBP	13.73	□□□□□ -0.21
RGS3-223	ENST00000488620	IGLL5	B9A064	214 aa		13.73	□□□□□ -0.21
RGS3-223	ENST00000488620	TMEM238	C9JI98	176 aa		13.73	□□□□□ -0.21
RGS3-223	ENST00000488620	NIPBL	Q6KC79	2804 aa	eCLIP	13.72	□□□□□ -0.21
RGS3-223	ENST00000488620	TEP1	Q99973	2627 aa	Known RBP	13.72	□□□□□ -0.21
RGS3-223	ENST00000488620		K7ERJ3	54 aa		13.71	□□□□□ -0.21
RGS3-223	ENST00000488620	TRBV6-8	A0A0A6YYG3	113 aa		13.7	□□□□□ -0.22
RGS3-223	ENST00000488620	LINC00242	Q5T6M2	205 aa		13.7	□□□□□ -0.22
RGS3-223	ENST00000488620	SPCS1	Q9Y6A9	102 aa		13.7	□□□□□ -0.22
RGS3-223	ENST00000488620	DEFB130B	P0DP73	79 aa		13.7	□□□□□ -0.22
RGS3-223	ENST00000488620	DEFB130A	P0DP74	79 aa		13.7	□□□□□ -0.22
RGS3-223	ENST00000488620	ZFAND6	Q6FIF0	208 aa		13.7	□□□□□ -0.22
RGS3-223	ENST00000488620	PRO0255	Q9UI72	69 aa		13.7	□□□□□ -0.22
RGS3-223	ENST00000488620		A0A0J9YXY3	114 aa		13.69	□□□□□ -0.22
RGS3-223	ENST00000488620	MIF	P14174	115 aa		13.69	□□□□□ -0.22
RGS3-223	ENST00000488620	C10orf126	Q8N4M7	172 aa		13.69	□□□□□ -0.22
RGS3-223	ENST00000488620	CDKN2A-AS1	Q9UH64	79 aa		13.69	□□□□□ -0.22
RGS3-223	ENST00000488620	NDUFA12	Q9UI09	145 aa		13.69	□□□□□ -0.22
RGS3-223	ENST00000488620	IGLV5-39	A0A0G2JS06	123 aa		13.68	□□□□□ -0.22
RGS3-223	ENST00000488620	LOC100131303	A0A0U1RQF7	123 aa		13.68	□□□□□ -0.22
RGS3-223	ENST00000488620	IGHV3-64	A0A075B6Q5	118 aa		13.67	□□□□□ -0.22
RGS3-223	ENST00000488620	TRAV8-3	A0A0A6YYJ7	113 aa		13.67	□□□□□ -0.22
RGS3-223	ENST00000488620	TIMM17B	O60830	172 aa		13.67	□□□□□ -0.22
RGS3-223	ENST00000488620	RPL24	P83731	157 aa	Known RBP	13.67	□□□□□ -0.22
RGS3-223	ENST00000488620	SPINK8	P0C7L1	97 aa		13.66	□□□□□ -0.22
RGS3-223	ENST00000488620	FAM222A	Q5U5X8	452 aa		13.66	□□□□□ -0.22
RGS3-223	ENST00000488620	NAA38	Q9BRA0	125 aa	Known RBP	13.66	□□□□□ -0.22
RGS3-223	ENST00000488620	DEFB135	Q30KP9	77 aa		13.65	□□□□□ -0.22
RGS3-223	ENST00000488620	ATP6V0E2	Q8NHE4	81 aa		13.65	□□□□□ -0.22
RGS3-223	ENST00000488620	RNF183	Q96D59	192 aa		13.64	□□□□□ -0.23
RGS3-223	ENST00000488620	SPANXD	Q9BXN6	97 aa		13.64	□□□□□ -0.23
RGS3-223	ENST00000488620	SPANXC	Q9NY87	97 aa		13.64	□□□□□ -0.23
RGS3-223	ENST00000488620	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.64	□□□□□ -0.23
RGS3-223	ENST00000488620	NDUFA1	O15239	70 aa		13.64	□□□□□ -0.23
RGS3-223	ENST00000488620	COX6A2	Q02221	97 aa		13.64	□□□□□ -0.23
RGS3-223	ENST00000488620	F8	P00451	2351 aa		13.63	□□□□□ -0.23
RGS3-223	ENST00000488620	GYPE	P15421	78 aa		13.63	□□□□□ -0.23
RGS3-223	ENST00000488620	LITAF	Q99732	161 aa		13.63	□□□□□ -0.23
RGS3-223	ENST00000488620	TRAV13-1	A0A0B4J241	112 aa		13.62	□□□□□ -0.23
RGS3-223	ENST00000488620	IGHV4-28	A0A0C4DH34	117 aa		13.62	□□□□□ -0.23
RGS3-223	ENST00000488620	LYRM7	Q5U5X0	104 aa		13.62	□□□□□ -0.23
RGS3-223	ENST00000488620	ATR	Q13535	2644 aa		13.62	□□□□□ -0.23
RGS3-223	ENST00000488620		A0A0B4J2C4	111 aa		13.61	□□□□□ -0.23
RGS3-223	ENST00000488620	CFC1B	P0CG36	223 aa		13.61	□□□□□ -0.23
RGS3-223	ENST00000488620	CFC1	P0CG37	223 aa		13.61	□□□□□ -0.23
RGS3-223	ENST00000488620	IGHV4-30-4	P0DP06	118 aa		13.61	□□□□□ -0.23
RGS3-223	ENST00000488620		Q8NAQ8	132 aa		13.61	□□□□□ -0.23
RGS3-223	ENST00000488620	PGPEP1	Q9NXJ5	209 aa		13.61	□□□□□ -0.23
RGS3-223	ENST00000488620		A0A1B0GUV1	79 aa		13.61	□□□□□ -0.23
RGS3-223	ENST00000488620		A8MZ25	164 aa		13.61	□□□□□ -0.23
RGS3-223	ENST00000488620	CHCHD5	Q9BSY4	110 aa		13.61	□□□□□ -0.23
RGS3-223	ENST00000488620	PRO1854	Q9UHT4	67 aa		13.61	□□□□□ -0.23
RGS3-223	ENST00000488620	TEX48	A0A1B0GUV7	120 aa		13.6	□□□□□ -0.23
RGS3-223	ENST00000488620	SMIM1	B2RUZ4	78 aa		13.6	□□□□□ -0.23
RGS3-223	ENST00000488620	PAX4	O43316	350 aa		13.6	□□□□□ -0.23
RGS3-223	ENST00000488620	IFITM1	P13164	125 aa		13.6	□□□□□ -0.23
RGS3-223	ENST00000488620	MUSTN1	Q8IVN3	82 aa		13.6	□□□□□ -0.23
RGS3-223	ENST00000488620		F5H768	121 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms