RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 LGALS9CQ6DKI2 356 aa12.07□□□□□ -0.48
SMARCD3-212ENST00000485610 Q6ZUT4 128 aa12.07□□□□□ -0.48
SMARCD3-212ENST00000485610 Q8N3U1 123 aa12.07□□□□□ -0.48
SMARCD3-212ENST00000485610 IGLV4-60A0A075B6I1 120 aa12.06□□□□□ -0.48
SMARCD3-212ENST00000485610 IGLV4-3A0A075B6K6 122 aa12.06□□□□□ -0.48
SMARCD3-212ENST00000485610 IGHV3-30P01768 117 aa12.06□□□□□ -0.48
SMARCD3-212ENST00000485610 IGHV3-33P01772 117 aa12.06□□□□□ -0.48
SMARCD3-212ENST00000485610 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
SMARCD3-212ENST00000485610 IGHV3-30-5P0DP03 117 aa12.06□□□□□ -0.48
SMARCD3-212ENST00000485610 FABP4P15090 132 aa12.06□□□□□ -0.48
SMARCD3-212ENST00000485610 PAPPA-AS1Q5QFB9 102 aa12.06□□□□□ -0.48
SMARCD3-212ENST00000485610 Q6ZN92 141 aa12.05□□□□□ -0.48
SMARCD3-212ENST00000485610 LINC00173Q6ZV60 143 aa12.05□□□□□ -0.48
SMARCD3-212ENST00000485610 IFI27L1Q96BM0 104 aa12.05□□□□□ -0.48
SMARCD3-212ENST00000485610 HIST1H2BLQ99880 126 aa12.05□□□□□ -0.48
SMARCD3-212ENST00000485610 Q9H8V8 135 aa12.05□□□□□ -0.48
SMARCD3-212ENST00000485610 ANGP03950 147 aaKnown RBP12.04□□□□□ -0.48
SMARCD3-212ENST00000485610 OPRPNQ99935 248 aaPredicted RBP12.04□□□□□ -0.48
SMARCD3-212ENST00000485610 CDC42SE2Q9NRR3 84 aa12.04□□□□□ -0.48
SMARCD3-212ENST00000485610 ZNF664Q8N3J9 261 aa12.03□□□□□ -0.48
SMARCD3-212ENST00000485610 LINC00476Q8WZB0 136 aa12.03□□□□□ -0.48
SMARCD3-212ENST00000485610 FAM104AQ969W3 186 aa12.03□□□□□ -0.48
SMARCD3-212ENST00000485610 IFITM10A6NMD0 228 aa12.02□□□□□ -0.48
SMARCD3-212ENST00000485610 RNASE13Q5GAN3 156 aaKnown RBP12.02□□□□□ -0.49
SMARCD3-212ENST00000485610 TEX43Q6ZNM6 134 aa12.02□□□□□ -0.49
SMARCD3-212ENST00000485610 C10orf126Q8N4M7 172 aa12.02□□□□□ -0.49
SMARCD3-212ENST00000485610 BAALCQ8WXS3 180 aa12.02□□□□□ -0.49
SMARCD3-212ENST00000485610 KLK12Q9UKR0 248 aa12.02□□□□□ -0.49
SMARCD3-212ENST00000485610 K7EP13 123 aa12.01□□□□□ -0.49
SMARCD3-212ENST00000485610 AMELXQ99217 191 aa12.01□□□□□ -0.49
SMARCD3-212ENST00000485610 VCX2Q9H322 139 aa12.01□□□□□ -0.49
SMARCD3-212ENST00000485610 ALMS1Q8TCU4 4167 aa12□□□□□ -0.49
SMARCD3-212ENST00000485610 LYSTQ99698 3801 aa12□□□□□ -0.49
SMARCD3-212ENST00000485610 TRAV9-2A0A087WT02 112 aa12□□□□□ -0.49
SMARCD3-212ENST00000485610 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
SMARCD3-212ENST00000485610 C2orf88Q9BSF0 95 aa12□□□□□ -0.49
SMARCD3-212ENST00000485610 MAP1LC3CQ9BXW4 147 aa12□□□□□ -0.49
SMARCD3-212ENST00000485610 LY6G6CO95867 125 aa11.99□□□□□ -0.49
SMARCD3-212ENST00000485610 CRPP02741 224 aa11.99□□□□□ -0.49
SMARCD3-212ENST00000485610 PRSS1P07477 247 aa11.99□□□□□ -0.49
SMARCD3-212ENST00000485610 PMVKQ15126 192 aa11.99□□□□□ -0.49
SMARCD3-212ENST00000485610 TTC32Q5I0X7 151 aa11.99□□□□□ -0.49
SMARCD3-212ENST00000485610 PRR34Q9NV39 138 aa11.99□□□□□ -0.49
SMARCD3-212ENST00000485610 REG3AQ06141 175 aa11.98□□□□□ -0.49
SMARCD3-212ENST00000485610 ZC2HC1BQ5TFG8 222 aa11.98□□□□□ -0.49
SMARCD3-212ENST00000485610 CLPSL2Q6UWE3 100 aa11.98□□□□□ -0.49
SMARCD3-212ENST00000485610 VPS13DQ5THJ4 4388 aa11.97□□□□□ -0.49
SMARCD3-212ENST00000485610 TRAV12-1A0A0B4J245 112 aa11.96□□□□□ -0.49
SMARCD3-212ENST00000485610 IGKV3OR2-268A0A0C4DH90 116 aa11.96□□□□□ -0.49
SMARCD3-212ENST00000485610 H0Y8G0 127 aa11.96□□□□□ -0.49
SMARCD3-212ENST00000485610 C3orf79P0CE67 100 aa11.96□□□□□ -0.49
SMARCD3-212ENST00000485610 KRTDAPP60985 99 aa11.96□□□□□ -0.49
SMARCD3-212ENST00000485610 UBE2WQ96B02 151 aa11.96□□□□□ -0.49
SMARCD3-212ENST00000485610 CST9LQ9H4G1 147 aa11.96□□□□□ -0.49
SMARCD3-212ENST00000485610 NBDYA0A0U1RRE5 68 aa11.95□□□□□ -0.5
SMARCD3-212ENST00000485610 PRSS29PA6NIE9 313 aa11.95□□□□□ -0.5
SMARCD3-212ENST00000485610 IBA57-AS1B1ANH7 110 aa11.95□□□□□ -0.5
SMARCD3-212ENST00000485610 SYS1-DBNDD2H3BUS1 97 aa11.95□□□□□ -0.5
SMARCD3-212ENST00000485610 TRAV13-1A0A0B4J241 112 aa11.95□□□□□ -0.5
SMARCD3-212ENST00000485610 MIAQ16674 131 aa11.95□□□□□ -0.5
SMARCD3-212ENST00000485610 ENHOQ6UWT2 76 aa11.95□□□□□ -0.5
SMARCD3-212ENST00000485610 KRTAP1-5Q9BYS1 174 aa11.95□□□□□ -0.5
SMARCD3-212ENST00000485610 LINC00959A0A1B0GUT2 108 aa11.94□□□□□ -0.5
SMARCD3-212ENST00000485610 UBE2D1P51668 147 aa11.94□□□□□ -0.5
SMARCD3-212ENST00000485610 PET117Q6UWS5 81 aa11.94□□□□□ -0.5
SMARCD3-212ENST00000485610 SPATA12Q7Z6I5 190 aa11.94□□□□□ -0.5
SMARCD3-212ENST00000485610 OR10D4PQ8NGN7 298 aa11.94□□□□□ -0.5
SMARCD3-212ENST00000485610 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
SMARCD3-212ENST00000485610 CCL25O15444 150 aa11.93□□□□□ -0.5
SMARCD3-212ENST00000485610 ODF1Q14990 250 aa11.93□□□□□ -0.5
SMARCD3-212ENST00000485610 SS18Q15532 418 aa11.93□□□□□ -0.5
SMARCD3-212ENST00000485610 TRAV8-4A0A0B4J246 113 aa11.92□□□□□ -0.5
SMARCD3-212ENST00000485610 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
SMARCD3-212ENST00000485610 F8VRH5 84 aa11.91□□□□□ -0.5
SMARCD3-212ENST00000485610 Q9HAA7 133 aa11.91□□□□□ -0.5
SMARCD3-212ENST00000485610 DNAH1Q9P2D7 4330 aa11.91□□□□□ -0.5
SMARCD3-212ENST00000485610 C20orf202A1L168 122 aa11.9□□□□□ -0.5
SMARCD3-212ENST00000485610 SEC11AP67812 179 aa11.9□□□□□ -0.5
SMARCD3-212ENST00000485610 LINC01545Q5VT33 79 aa11.9□□□□□ -0.5
SMARCD3-212ENST00000485610 FAM19A3Q7Z5A8 133 aa11.9□□□□□ -0.5
SMARCD3-212ENST00000485610 MRPL35Q9NZE8 188 aaKnown RBP11.9□□□□□ -0.5
SMARCD3-212ENST00000485610 DNAH6Q9C0G6 4158 aa11.9□□□□□ -0.5
SMARCD3-212ENST00000485610 IGLV4-69A0A075B6H9 119 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 IGLV10-54A0A075B6I4 117 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 A0A0J9YXV3 536 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 IGLC3P0DOY3 106 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 LINC00242Q5T6M2 205 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 CHCHD10Q8WYQ3 142 aaPredicted RBP11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 RMI2Q96E14 147 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 C1orf43Q9BWL3 253 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 LCE6AA0A183 80 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 TINCRA0A1B0GVN0 87 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 Q6ZR54 194 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 CHAC1Q9BUX1 264 aa11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
SMARCD3-212ENST00000485610 XCL1P47992 114 aa11.88□□□□□ -0.51
SMARCD3-212ENST00000485610 NFE4Q86UQ8 179 aa11.88□□□□□ -0.51
SMARCD3-212ENST00000485610 PMCHL2Q9BQD1 86 aa11.88□□□□□ -0.51
SMARCD3-212ENST00000485610 IGKV2D-24A0A075B6R9 120 aa11.87□□□□□ -0.51
SMARCD3-212ENST00000485610 M0R2N4 97 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms