RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 Q6ZTC4 211 aa9.35□□□□□ -0.91
RXRB-205ENST00000483821 hDV102S1A0JD36 115 aa9.34□□□□□ -0.91
RXRB-205ENST00000483821 PCP4L1A6NKN8 68 aa9.34□□□□□ -0.91
RXRB-205ENST00000483821 TIRAPP58753 221 aa9.34□□□□□ -0.91
RXRB-205ENST00000483821 NANOS2P60321 138 aaKnown RBP9.34□□□□□ -0.91
RXRB-205ENST00000483821 OPRPNQ99935 248 aaPredicted RBP9.34□□□□□ -0.91
RXRB-205ENST00000483821 PRO1933Q9H354 126 aa9.34□□□□□ -0.91
RXRB-205ENST00000483821 HERVK_113P61574 105 aa9.33□□□□□ -0.92
RXRB-205ENST00000483821 SEC11AP67812 179 aa9.33□□□□□ -0.92
RXRB-205ENST00000483821 MIEN1Q9BRT3 115 aa9.33□□□□□ -0.92
RXRB-205ENST00000483821 UQCR10Q9UDW1 63 aa9.33□□□□□ -0.92
RXRB-205ENST00000483821 NBEAL1Q6ZS30 2694 aa9.33□□□□□ -0.92
RXRB-205ENST00000483821 IGLC3P0DOY3 106 aa9.32□□□□□ -0.92
RXRB-205ENST00000483821 GAGE6Q13070 117 aa9.32□□□□□ -0.92
RXRB-205ENST00000483821 MAJINQ3KP22 176 aa9.32□□□□□ -0.92
RXRB-205ENST00000483821 CEMP1Q6PRD7 247 aaPredicted RBP9.32□□□□□ -0.92
RXRB-205ENST00000483821 NFE4Q86UQ8 179 aa9.32□□□□□ -0.92
RXRB-205ENST00000483821 A0A096LPF7 62 aa9.31□□□□□ -0.92
RXRB-205ENST00000483821 A0A1B0GUV1 79 aa9.31□□□□□ -0.92
RXRB-205ENST00000483821 TMEM262E9PQX1 116 aa9.31□□□□□ -0.92
RXRB-205ENST00000483821 LELP1Q5T871 98 aa9.31□□□□□ -0.92
RXRB-205ENST00000483821 ZC2HC1BQ5TFG8 222 aa9.31□□□□□ -0.92
RXRB-205ENST00000483821 Q6ZUT4 128 aa9.31□□□□□ -0.92
RXRB-205ENST00000483821 STPG4Q8N801 248 aa9.31□□□□□ -0.92
RXRB-205ENST00000483821 CDC42SE2Q9NRR3 84 aa9.31□□□□□ -0.92
RXRB-205ENST00000483821 ANK2Q01484 3957 aa9.3□□□□□ -0.92
RXRB-205ENST00000483821 IGLV4-69A0A075B6H9 119 aa9.3□□□□□ -0.92
RXRB-205ENST00000483821 TRAV8-6A0A0B4J262 113 aa9.3□□□□□ -0.92
RXRB-205ENST00000483821 TINCRA0A1B0GVN0 87 aa9.3□□□□□ -0.92
RXRB-205ENST00000483821 C11orf86A6NJI1 115 aa9.3□□□□□ -0.92
RXRB-205ENST00000483821 DDTP30046 118 aa9.3□□□□□ -0.92
RXRB-205ENST00000483821 C15orf53Q8NAA6 179 aa9.3□□□□□ -0.92
RXRB-205ENST00000483821 GEMIN7Q9H840 131 aaKnown RBP9.3□□□□□ -0.92
RXRB-205ENST00000483821 TMEM170BQ5T4T1 132 aa9.29□□□□□ -0.92
RXRB-205ENST00000483821 SLC25A34Q6PIV7 304 aa9.29□□□□□ -0.92
RXRB-205ENST00000483821 FAM104AQ969W3 186 aa9.29□□□□□ -0.92
RXRB-205ENST00000483821 CHAC1Q9BUX1 264 aa9.29□□□□□ -0.92
RXRB-205ENST00000483821 A0A0J9YXV3 536 aa9.28□□□□□ -0.92
RXRB-205ENST00000483821 COX8AP10176 69 aa9.28□□□□□ -0.92
RXRB-205ENST00000483821 UBE2D1P51668 147 aa9.28□□□□□ -0.92
RXRB-205ENST00000483821 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
RXRB-205ENST00000483821 LYPD5Q6UWN5 251 aa9.28□□□□□ -0.92
RXRB-205ENST00000483821 C14orf144Q96I85 54 aa9.28□□□□□ -0.92
RXRB-205ENST00000483821 H3BRM9 83 aa9.27□□□□□ -0.93
RXRB-205ENST00000483821 CCL25O15444 150 aa9.27□□□□□ -0.93
RXRB-205ENST00000483821 DLEU1O43261 78 aa9.27□□□□□ -0.93
RXRB-205ENST00000483821 HERVK_113P63121 156 aa9.27□□□□□ -0.93
RXRB-205ENST00000483821 RNASE13Q5GAN3 156 aaKnown RBP9.27□□□□□ -0.93
RXRB-205ENST00000483821 FAM19A3Q7Z5A8 133 aa9.27□□□□□ -0.93
RXRB-205ENST00000483821 E9PLD3 99 aa9.26□□□□□ -0.93
RXRB-205ENST00000483821 NMUP48645 174 aa9.26□□□□□ -0.93
RXRB-205ENST00000483821 RBX1P62877 108 aa9.26□□□□□ -0.93
RXRB-205ENST00000483821 DEFA6Q01524 100 aa9.26□□□□□ -0.93
RXRB-205ENST00000483821 HNRNPA3P51991 378 aaKnown RBP9.25□□□□□ -0.93
RXRB-205ENST00000483821 TRAV13-1A0A0B4J241 112 aa9.24□□□□□ -0.93
RXRB-205ENST00000483821 SIVA1O15304 175 aa9.24□□□□□ -0.93
RXRB-205ENST00000483821 ZNF22P17026 224 aaPredicted RBP9.24□□□□□ -0.93
RXRB-205ENST00000483821 SS18Q15532 418 aa9.24□□□□□ -0.93
RXRB-205ENST00000483821 BOD1L2Q8IYS8 172 aa9.24□□□□□ -0.93
RXRB-205ENST00000483821 LINC00469Q8N7U9 141 aa9.24□□□□□ -0.93
RXRB-205ENST00000483821 PLEKHB2Q96CS7 222 aa9.24□□□□□ -0.93
RXRB-205ENST00000483821 IGLV4-60A0A075B6I1 120 aa9.23□□□□□ -0.93
RXRB-205ENST00000483821 TMEM223A0PJW6 202 aa9.23□□□□□ -0.93
RXRB-205ENST00000483821 MPV17L2Q567V2 206 aa9.23□□□□□ -0.93
RXRB-205ENST00000483821 LINC00242Q5T6M2 205 aa9.23□□□□□ -0.93
RXRB-205ENST00000483821 MRPS16Q9Y3D3 137 aaKnown RBP9.23□□□□□ -0.93
RXRB-205ENST00000483821 IGLV5-45A0A087WSX0 123 aa9.22□□□□□ -0.93
RXRB-205ENST00000483821 LEPROTO15243 131 aa9.22□□□□□ -0.93
RXRB-205ENST00000483821 ANGP03950 147 aaKnown RBP9.21□□□□□ -0.94
RXRB-205ENST00000483821 LGALS3P17931 250 aaKnown RBP9.21□□□□□ -0.94
RXRB-205ENST00000483821 IGKV2D-26A0A0A0MRZ7 120 aa9.2□□□□□ -0.94
RXRB-205ENST00000483821 LINC00959A0A1B0GUT2 108 aa9.2□□□□□ -0.94
RXRB-205ENST00000483821 IGLL5B9A064 214 aa9.2□□□□□ -0.94
RXRB-205ENST00000483821 CCL18P55774 89 aa9.2□□□□□ -0.94
RXRB-205ENST00000483821 TCTAP57738 103 aa9.2□□□□□ -0.94
RXRB-205ENST00000483821 ESRGQ1W209 222 aa9.2□□□□□ -0.94
RXRB-205ENST00000483821 PCP2Q8IVA1 136 aa9.2□□□□□ -0.94
RXRB-205ENST00000483821 CMYA5Q8N3K9 4069 aa9.2□□□□□ -0.94
RXRB-205ENST00000483821 DNAH3Q8TD57 4116 aa9.2□□□□□ -0.94
RXRB-205ENST00000483821 IGHV1-58A0A0C4DH39 117 aa9.19□□□□□ -0.94
RXRB-205ENST00000483821 IGKV3OR2-268A0A0C4DH90 116 aa9.19□□□□□ -0.94
RXRB-205ENST00000483821 MYMXA0A1B0GTQ4 84 aa9.19□□□□□ -0.94
RXRB-205ENST00000483821 LINC00587B1AMM8 73 aa9.19□□□□□ -0.94
RXRB-205ENST00000483821 J3QQQ9 107 aa9.19□□□□□ -0.94
RXRB-205ENST00000483821 CDKN2A-AS1Q9UH64 79 aa9.19□□□□□ -0.94
RXRB-205ENST00000483821 REG3AQ06141 175 aa9.18□□□□□ -0.94
RXRB-205ENST00000483821 LINC00269Q8N2A0 174 aa9.18□□□□□ -0.94
RXRB-205ENST00000483821 HIGD1BQ9P298 99 aa9.18□□□□□ -0.94
RXRB-205ENST00000483821 KLK5Q9Y337 293 aaPredicted RBP9.18□□□□□ -0.94
RXRB-205ENST00000483821 TENM3Q9P273 2699 aa9.18□□□□□ -0.94
RXRB-205ENST00000483821 NUPR2A6NF83 97 aa9.17□□□□□ -0.94
RXRB-205ENST00000483821 ZNF815PA8K554 130 aa9.17□□□□□ -0.94
RXRB-205ENST00000483821 CTAG1AP78358 180 aa9.17□□□□□ -0.94
RXRB-205ENST00000483821 COX6A2Q02221 97 aa9.17□□□□□ -0.94
RXRB-205ENST00000483821 LINC01561Q8N1V8 128 aa9.17□□□□□ -0.94
RXRB-205ENST00000483821 TRAV8-4A0A0B4J246 113 aa9.16□□□□□ -0.94
RXRB-205ENST00000483821 M0R143 59 aa9.16□□□□□ -0.94
RXRB-205ENST00000483821 CRPP02741 224 aa9.16□□□□□ -0.94
RXRB-205ENST00000483821 SPINK8P0C7L1 97 aa9.16□□□□□ -0.94
RXRB-205ENST00000483821 IGHV3-30-3P0DP02 117 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms