RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 NABP2Q9BQ15 211 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 DPY30Q9C005 99 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 COMMD3Q9UBI1 195 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 SPTBN4Q9H254 2564 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 MAST4O15021 2626 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 ZNF292O60281 2723 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 REV3LO60673 3130 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 SSC5DA1L4H1 1573 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 LRRC37AA6NMS7 1700 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 ARAP2Q8WZ64 1704 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 ANKRD36CQ5JPF3 1778 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 MYH4Q9Y623 1939 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 NCOR1O75376 2440 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 CHD9Q3L8U1 2897 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 CHD7Q9P2D1 2997 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 TCRBV3S1A0A5B6 114 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 ZNF727A8MUV8 499 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 SPINK8P0C7L1 97 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 IGLC1P0CG04 106 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 SPTBP11277 2137 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 QRFPP83859 136 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 CATR1Q13166 79 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 KCNRGQ8N5I3 272 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 DPH3Q96FX2 82 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 S100A13Q99584 98 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 BANF2Q9H503 90 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 DSPPQ9NZW4 1301 aa1.53□□□□□ -2.16
MCF2-207ENST00000483690 NOP16Q9Y3C1 178 aaKnown RBP1.53□□□□□ -2.16
MCF2-207ENST00000483690 CFAP54Q96N23 3096 aa1.53□□□□□ -2.17
MCF2-207ENST00000483690 FAM208BQ5VWN6 2430 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 MUC4Q99102 2169 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 MYH8P13535 1937 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 LRRC37A2A6NM11 1700 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 XIRP2A4UGR9 3374 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 CFAP47Q6ZTR5 3102 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 TRIOO75962 3097 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 USP9XQ93008 2570 aaPredicted RBP1.52□□□□□ -2.17
MCF2-207ENST00000483690 LOC107984156A0A0G2JMH3 177 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 TRBV30A0A0K0K1B3 111 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 FAM236AA0A1B0GUQ0 79 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 FAM236BA0A1B0GV22 79 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 LINC00032P0C843 101 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 IFITM1P13164 125 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 GNGT1P63211 74 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 PEA15Q15121 130 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 IQCJQ1A5X6 159 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 Q6AWC8 147 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 IZUMO2Q6UXV1 221 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 ZNF720Q7Z2F6 126 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 ARL17AQ8IVW1 177 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 ATOH7Q8N100 152 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 COPS9Q8WXC6 57 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 VAMP8Q9BV40 100 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 SEC11CQ9BY50 192 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 NAA60Q9H7X0 242 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 BET1LQ9NYM9 111 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 AP4S1Q9Y587 144 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 DNAH14Q0VDD8 3507 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 MYO15AQ9UKN7 3530 aa1.52□□□□□ -2.17
MCF2-207ENST00000483690 RIF1Q5UIP0 2472 aaKnown RBP1.51□□□□□ -2.17
MCF2-207ENST00000483690 MYH1P12882 1939 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 TRAV12-2A0A075B6T6 113 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 LOC730098B7Z3J9 87 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 TMEM262E9PQX1 116 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 PDCD5O14737 125 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 UQCRQO14949 82 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 EDF1O60869 148 aaKnown RBP1.51□□□□□ -2.17
MCF2-207ENST00000483690 APOC3P02656 99 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 PYYP10082 97 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 LSM3P62310 102 aaKnown RBP1.51□□□□□ -2.17
MCF2-207ENST00000483690 Q0VG73 95 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 MRPL54Q6P161 138 aaKnown RBP1.51□□□□□ -2.17
MCF2-207ENST00000483690 Q6ZQY7 126 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 Q6ZUT4 128 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 C10orf111Q8N326 155 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 OTOSQ8NHW6 89 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 BRK1Q8WUW1 75 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 AQP10Q96PS8 301 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 ATG5Q9H1Y0 275 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 SMCO4Q9NRQ5 59 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 LINC00312Q9Y6C7 94 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 ANK1P16157 1881 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 MAP1BP46821 2468 aaKnown RBP1.51□□□□□ -2.17
MCF2-207ENST00000483690 NAV2Q8IVL1 2488 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 ASH1LQ9NR48 2969 aaKnown RBP1.51□□□□□ -2.17
MCF2-207ENST00000483690 DDX60LQ5H9U9 1706 aaKnown RBP1.51□□□□□ -2.17
MCF2-207ENST00000483690 MYO7AQ13402 2215 aa1.51□□□□□ -2.17
MCF2-207ENST00000483690 FAM186AA6NE01 2351 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 WDFY4Q6ZS81 3184 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 C5orf42Q9H799 3197 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 A0A1B0GUL6 1792 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 M0R2P5 195 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 TCRAP04437 139 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 HLA-DRB4P13762 266 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 SNCAP37840 140 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 RPL37AP61513 92 aaKnown RBP1.5□□□□□ -2.17
MCF2-207ENST00000483690 Q56UQ5 140 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 C9orf153Q5TBE3 101 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 LINC01545Q5VT33 79 aa1.5□□□□□ -2.17
MCF2-207ENST00000483690 ATP6V0E2Q8NHE4 81 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms