RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 HMGA1P17096 107 aaKnown RBP1.66□□□□□ -2.14
COMMD3-213ENST00000483684 PLNP26678 52 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 CAV3P56539 151 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 FAM27BQ5VT28 67 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 HCP5Q6MZN7 132 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 SFTA2Q6UW10 78 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 Q6ZQT0 140 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 WFDC6Q9BQY6 131 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 PSENENQ9NZ42 101 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 C22orf24Q9Y442 160 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 MYOM1P52179 1685 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 CLTCQ00610 1675 aaKnown RBP1.66□□□□□ -2.14
COMMD3-213ENST00000483684 PREX1Q8TCU6 1659 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 LAMB1P07942 1786 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 MYO16Q9Y6X6 1858 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 GREB1Q4ZG55 1949 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 PATJQ8NI35 1801 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 SLIT2O94813 1529 aa1.66□□□□□ -2.14
COMMD3-213ENST00000483684 MCM3APO60318 1980 aa1.65□□□□□ -2.14
COMMD3-213ENST00000483684 RGPD3A6NKT7 1758 aaPredicted RBP1.65□□□□□ -2.14
COMMD3-213ENST00000483684 TET3O43151 1660 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 USP54Q70EL1 1684 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 ALS2Q96Q42 1657 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 ROBO1Q9Y6N7 1651 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 CDC42BPGQ6DT37 1551 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 MROH2BQ7Z745 1585 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 TRAV10A0A0B4J240 114 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 TRAV12-3A0A0B4J271 114 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 CXorf51AA0A1B0GTR3 108 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 CTXND1A0A1B0GTU2 59 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 LOC101927531A0A1B0GV80 90 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 SMIM27A0A1W2PRY6 76 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 C11orf86A6NJI1 115 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 NDUFB1O75438 58 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 HRES1P13985 223 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 SPINT3P49223 89 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 MIR22HGQ0VDD5 57 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 NNATQ16517 81 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 BPESC1Q9GZL8 116 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 MINOS1-NBL1R4GNA1 71 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 NWD2Q9ULI1 1742 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 CRYBG1Q9Y4K1 1723 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 USP32Q8NFA0 1604 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 PTPRBP23467 1997 aa1.65□□□□□ -2.15
COMMD3-213ENST00000483684 RGPD2P0DJD1 1756 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 GCC2Q8IWJ2 1684 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 MICAL3Q7RTP6 2002 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 HELZP42694 1942 aaKnown RBP1.64□□□□□ -2.15
COMMD3-213ENST00000483684 IGKV1D-42A0A075B6H8 117 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 IGHV3-64A0A075B6Q5 118 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 IGHV1-18A0A0C4DH31 117 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 TRBV10-1A0A0K0K1A3 114 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 ARMS2P0C7Q2 107 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 Q5VV11 94 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 Q86TA4 180 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 AMELXQ99217 191 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 CDC42SE2Q9NRR3 84 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 ORMDL1Q9P0S3 153 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 LENEPQ9Y5L5 61 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 TOP2BQ02880 1626 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 THADAQ6YHU6 1953 aa1.64□□□□□ -2.15
COMMD3-213ENST00000483684 DOCK2Q92608 1830 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 POLR1AO95602 1720 aaPredicted RBP1.63□□□□□ -2.15
COMMD3-213ENST00000483684 TNS1Q9HBL0 1735 aaKnown RBP1.63□□□□□ -2.15
COMMD3-213ENST00000483684 SNRNP200O75643 2136 aaKnown RBP1.63□□□□□ -2.15
COMMD3-213ENST00000483684 PLXNA3P51805 1871 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 DOCK1Q14185 1865 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 PDCD11Q14690 1871 aaKnown RBP1.63□□□□□ -2.15
COMMD3-213ENST00000483684 TULP4Q9NRJ4 1543 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 A0A1B0GUT8 65 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 A0A1W2PNM2 257 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 PSCAO43653 123 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 PRB4P10163 310 aaPredicted RBP1.63□□□□□ -2.15
COMMD3-213ENST00000483684 FXYD6P3P58550 94 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 ERHP84090 104 aaKnown RBP1.63□□□□□ -2.15
COMMD3-213ENST00000483684 C4orf3Q8WVX3 66 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 UBL5Q9BZL1 73 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 V9GYV3 84 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 MALRD1Q5VYJ5 2156 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 ADGRB2O60241 1585 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 ERCC6L2Q5T890 1561 aa1.63□□□□□ -2.15
COMMD3-213ENST00000483684 TRPM6Q9BX84 2022 aa1.62□□□□□ -2.15
COMMD3-213ENST00000483684 KDM3BQ7LBC6 1761 aa1.62□□□□□ -2.15
COMMD3-213ENST00000483684 HMGN4O00479 90 aa1.62□□□□□ -2.15
COMMD3-213ENST00000483684 IGHV3-33P01772 117 aa1.62□□□□□ -2.15
COMMD3-213ENST00000483684 SPAG11BQ08648 103 aa1.62□□□□□ -2.15
COMMD3-213ENST00000483684 SPAG11AQ6PDA7 123 aa1.62□□□□□ -2.15
COMMD3-213ENST00000483684 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.62□□□□□ -2.15
COMMD3-213ENST00000483684 MED12LQ86YW9 2145 aa1.62□□□□□ -2.15
COMMD3-213ENST00000483684 DMAC1Q96GE9 116 aa1.62□□□□□ -2.15
COMMD3-213ENST00000483684 NDUFA4L2Q9NRX3 87 aa1.62□□□□□ -2.15
COMMD3-213ENST00000483684 R4GMQ9 66 aa1.62□□□□□ -2.15
COMMD3-213ENST00000483684 AFDNP55196 1824 aaKnown RBP1.61□□□□□ -2.15
COMMD3-213ENST00000483684 CPAMD8Q8IZJ3 1885 aa1.61□□□□□ -2.15
COMMD3-213ENST00000483684 ABCC8Q09428 1581 aa1.61□□□□□ -2.15
COMMD3-213ENST00000483684 TRBV7-4A0A0J9YYF1 115 aa1.61□□□□□ -2.15
COMMD3-213ENST00000483684 ODF3BA8MYP8 253 aa1.61□□□□□ -2.15
COMMD3-213ENST00000483684 J3QRE1 110 aa1.61□□□□□ -2.15
COMMD3-213ENST00000483684 DEFB134Q4QY38 66 aa1.61□□□□□ -2.15
COMMD3-213ENST00000483684 C1orf137Q5JT78 98 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms