RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 CHAC1Q9BUX1 264 aa5.05□□□□□ -1.6
CCNC-204ENST00000482541 RPP21Q9H633 154 aaKnown RBP5.05□□□□□ -1.6
CCNC-204ENST00000482541 APOBP04114 4563 aaKnown RBP5.05□□□□□ -1.6
CCNC-204ENST00000482541 USP17L23D6RBM5 183 aa5.04□□□□□ -1.6
CCNC-204ENST00000482541 K7EN84 100 aa5.04□□□□□ -1.6
CCNC-204ENST00000482541 HLA-DQA1P01909 254 aa5.04□□□□□ -1.6
CCNC-204ENST00000482541 REG3AQ06141 175 aa5.04□□□□□ -1.6
CCNC-204ENST00000482541 ALKAL2Q6UX46 152 aa5.04□□□□□ -1.6
CCNC-204ENST00000482541 SCXQ7RTU7 201 aa5.04□□□□□ -1.6
CCNC-204ENST00000482541 TMEM243Q9BU79 118 aa5.04□□□□□ -1.6
CCNC-204ENST00000482541 RNASE7Q9H1E1 156 aaKnown RBP5.04□□□□□ -1.6
CCNC-204ENST00000482541 DNAH5Q8TE73 4624 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 C1orf196B1AJZ1 125 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 FOXA3P55318 350 aaPredicted RBP5.03□□□□□ -1.6
CCNC-204ENST00000482541 SUMO2P61956 95 aaKnown RBP5.03□□□□□ -1.6
CCNC-204ENST00000482541 KRTAP26-1Q6PEX3 210 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 FAM231DQ6ZW35 169 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 C20orf203Q8NBC4 194 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 A8MWL6 223 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 PRSS1P07477 247 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 FABP9Q0Z7S8 132 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 C9orf163Q8N9P6 203 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 CIRBP-AS1Q8TBR5 109 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 DEFB104AQ8WTQ1 72 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 GTSF1Q8WW33 167 aa5.03□□□□□ -1.6
CCNC-204ENST00000482541 IGLV4-60A0A075B6I1 120 aa5.02□□□□□ -1.61
CCNC-204ENST00000482541 UBE2L6O14933 153 aa5.02□□□□□ -1.61
CCNC-204ENST00000482541 CLPSL2Q6UWE3 100 aa5.02□□□□□ -1.61
CCNC-204ENST00000482541 GATD1Q8NB37 220 aa5.02□□□□□ -1.61
CCNC-204ENST00000482541 H7C423 109 aa5.01□□□□□ -1.61
CCNC-204ENST00000482541 NCR2O95944 276 aa5.01□□□□□ -1.61
CCNC-204ENST00000482541 AMTP48728 403 aa5.01□□□□□ -1.61
CCNC-204ENST00000482541 MRPL52Q86TS9 123 aaKnown RBP5.01□□□□□ -1.61
CCNC-204ENST00000482541 EIF5A2Q9GZV4 153 aaKnown RBP5.01□□□□□ -1.61
CCNC-204ENST00000482541 IGLV10-54A0A075B6I4 117 aa5□□□□□ -1.61
CCNC-204ENST00000482541 TRAV26-2A0A0B4J265 109 aa5□□□□□ -1.61
CCNC-204ENST00000482541 A4D1N5 150 aa5□□□□□ -1.61
CCNC-204ENST00000482541 FAM231BA6NCW3 169 aa5□□□□□ -1.61
CCNC-204ENST00000482541 PYY3Q5JQD4 70 aa5□□□□□ -1.61
CCNC-204ENST00000482541 BORCS7Q96B45 105 aa5□□□□□ -1.61
CCNC-204ENST00000482541 GFRA4Q9GZZ7 299 aa5□□□□□ -1.61
CCNC-204ENST00000482541 M0R143 59 aa5□□□□□ -1.61
CCNC-204ENST00000482541 CNBPP62633 177 aaKnown RBP5□□□□□ -1.61
CCNC-204ENST00000482541 SDIM1Q6ZPB5 146 aa5□□□□□ -1.61
CCNC-204ENST00000482541 SVBPQ8N300 66 aa5□□□□□ -1.61
CCNC-204ENST00000482541 SMIM7Q9BQ49 75 aa5□□□□□ -1.61
CCNC-204ENST00000482541 SRRM2Q9UQ35 2752 aaKnown RBP5□□□□□ -1.61
CCNC-204ENST00000482541 TRBV6-5A0A0K0K1A5 114 aa4.99□□□□□ -1.61
CCNC-204ENST00000482541 SDHAF1A6NFY7 115 aa4.99□□□□□ -1.61
CCNC-204ENST00000482541 ZNF727A8MUV8 499 aa4.99□□□□□ -1.61
CCNC-204ENST00000482541 KRTAP29-1A8MX34 341 aaPredicted RBP4.99□□□□□ -1.61
CCNC-204ENST00000482541 LINC01551Q86U37 167 aa4.99□□□□□ -1.61
CCNC-204ENST00000482541 TSKUQ8WUA8 353 aa4.99□□□□□ -1.61
CCNC-204ENST00000482541 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
CCNC-204ENST00000482541 OSTCQ9NRP0 149 aa4.99□□□□□ -1.61
CCNC-204ENST00000482541 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.98□□□□□ -1.61
CCNC-204ENST00000482541 A0A1B0GUT8 65 aa4.98□□□□□ -1.61
CCNC-204ENST00000482541 hDV102S1A0JD36 115 aa4.98□□□□□ -1.61
CCNC-204ENST00000482541 HIGD1CA8MV81 97 aa4.98□□□□□ -1.61
CCNC-204ENST00000482541 I3L3M4 83 aa4.98□□□□□ -1.61
CCNC-204ENST00000482541 SRP19P09132 144 aaKnown RBP4.98□□□□□ -1.61
CCNC-204ENST00000482541 S100A2P29034 98 aa4.98□□□□□ -1.61
CCNC-204ENST00000482541 KRTAP10-4P60372 401 aaPredicted RBP4.98□□□□□ -1.61
CCNC-204ENST00000482541 FOXI1Q12951 378 aa4.98□□□□□ -1.61
CCNC-204ENST00000482541 AMMECR1LQ6DCA0 310 aa4.98□□□□□ -1.61
CCNC-204ENST00000482541 RPL39LQ96EH5 51 aaKnown RBP4.98□□□□□ -1.61
CCNC-204ENST00000482541 TMEM191AQ9H0A3 160 aa4.98□□□□□ -1.61
CCNC-204ENST00000482541 APCSP02743 223 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 PMCHP20382 165 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 SNHG12Q9BXW3 62 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 IGHV3-64A0A075B6Q5 118 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 COLCA2A8K830 154 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 FGF6P10767 208 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 CIRBPQ14011 172 aaKnown RBP4.97□□□□□ -1.61
CCNC-204ENST00000482541 PEA15Q15121 130 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 TMEM241Q24JQ0 296 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 RNASEKQ6P5S7 137 aaKnown RBP4.97□□□□□ -1.61
CCNC-204ENST00000482541 UQCC3Q6UW78 93 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 CBLN2Q8IUK8 224 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 MRAP2Q96G30 205 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 BTF3L4Q96K17 158 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 VPS25Q9BRG1 176 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 PRO1933Q9H354 126 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 ST20Q9HBF5 79 aa4.97□□□□□ -1.61
CCNC-204ENST00000482541 FLG2Q5D862 2391 aaPredicted RBP4.96□□□□□ -1.61
CCNC-204ENST00000482541 TRBV27A0A0K0K1C4 114 aa4.96□□□□□ -1.62
CCNC-204ENST00000482541 PPP1R17O96001 155 aa4.96□□□□□ -1.62
CCNC-204ENST00000482541 SLPIP03973 132 aa4.96□□□□□ -1.62
CCNC-204ENST00000482541 ESDP10768 282 aa4.96□□□□□ -1.62
CCNC-204ENST00000482541 POLR2KP53803 58 aaKnown RBP4.96□□□□□ -1.62
CCNC-204ENST00000482541 RIGQ13278 110 aa4.96□□□□□ -1.62
CCNC-204ENST00000482541 OR5A1Q8NGJ0 315 aa4.96□□□□□ -1.62
CCNC-204ENST00000482541 RNF185Q96GF1 192 aa4.96□□□□□ -1.62
CCNC-204ENST00000482541 TMEM101Q96IK0 257 aa4.96□□□□□ -1.62
CCNC-204ENST00000482541 V9GYV3 84 aa4.96□□□□□ -1.62
CCNC-204ENST00000482541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.95□□□□□ -1.62
CCNC-204ENST00000482541 IGKV3OR2-268A0A0C4DH90 116 aa4.95□□□□□ -1.62
CCNC-204ENST00000482541 IGKV2-29A2NJV5 120 aaPredicted RBP4.95□□□□□ -1.62
CCNC-204ENST00000482541 OXTP01178 125 aa4.95□□□□□ -1.62
CCNC-204ENST00000482541 RPL37AP61513 92 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms