RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 PSMG3-AS1Q96PY0 264 aa8.42□□□□□ -1.06
SMPD4-218ENST00000482171 WFDC10AQ9H1F0 79 aa8.42□□□□□ -1.06
SMPD4-218ENST00000482171 TRBV7-3A0A075B6L6 115 aa8.41□□□□□ -1.06
SMPD4-218ENST00000482171 IGHV3-30-3P0DP02 117 aa8.41□□□□□ -1.06
SMPD4-218ENST00000482171 LY6G6DO95868 133 aa8.41□□□□□ -1.06
SMPD4-218ENST00000482171 C9orf66Q5T8R8 295 aa8.41□□□□□ -1.06
SMPD4-218ENST00000482171 ADGRG4Q8IZF6 3080 aa8.41□□□□□ -1.06
SMPD4-218ENST00000482171 IGKV3D-7A0A0C4DH55 119 aa8.41□□□□□ -1.06
SMPD4-218ENST00000482171 LGALS9O00182 355 aa8.41□□□□□ -1.06
SMPD4-218ENST00000482171 NXPH4O95158 308 aa8.41□□□□□ -1.06
SMPD4-218ENST00000482171 OVOL2Q9BRP0 275 aa8.41□□□□□ -1.06
SMPD4-218ENST00000482171 NRACQ8N912 160 aa8.4□□□□□ -1.06
SMPD4-218ENST00000482171 TRAV4A0A0B4J268 109 aa8.4□□□□□ -1.06
SMPD4-218ENST00000482171 H3BT86 120 aa8.4□□□□□ -1.06
SMPD4-218ENST00000482171 SS18Q15532 418 aa8.4□□□□□ -1.06
SMPD4-218ENST00000482171 ATRQ13535 2644 aa8.4□□□□□ -1.06
SMPD4-218ENST00000482171 TMEM126AQ9H061 195 aa8.4□□□□□ -1.06
SMPD4-218ENST00000482171 ANGP03950 147 aaKnown RBP8.4□□□□□ -1.07
SMPD4-218ENST00000482171 Q6ZTI0 123 aa8.4□□□□□ -1.07
SMPD4-218ENST00000482171 DNAJC30Q96LL9 226 aa8.39□□□□□ -1.07
SMPD4-218ENST00000482171 ATMQ13315 3056 aa8.39□□□□□ -1.07
SMPD4-218ENST00000482171 TRAV25A0A0B4J276 109 aa8.39□□□□□ -1.07
SMPD4-218ENST00000482171 C20orf203Q8NBC4 194 aa8.39□□□□□ -1.07
SMPD4-218ENST00000482171 IGHV3-33P01772 117 aa8.39□□□□□ -1.07
SMPD4-218ENST00000482171 ACYP1P07311 99 aa8.39□□□□□ -1.07
SMPD4-218ENST00000482171 GYPEP15421 78 aa8.39□□□□□ -1.07
SMPD4-218ENST00000482171 PROK1P58294 105 aa8.39□□□□□ -1.07
SMPD4-218ENST00000482171 HERVK_113P63121 156 aa8.39□□□□□ -1.07
SMPD4-218ENST00000482171 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
SMPD4-218ENST00000482171 XCL1P47992 114 aa8.38□□□□□ -1.07
SMPD4-218ENST00000482171 HAMPP81172 84 aa8.38□□□□□ -1.07
SMPD4-218ENST00000482171 C5orf38Q86SI9 138 aa8.38□□□□□ -1.07
SMPD4-218ENST00000482171 DCANP1Q8TF63 244 aa8.38□□□□□ -1.07
SMPD4-218ENST00000482171 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
SMPD4-218ENST00000482171 A0A1B0GX51 115 aa8.37□□□□□ -1.07
SMPD4-218ENST00000482171 CCDC179H3BU77 68 aa8.37□□□□□ -1.07
SMPD4-218ENST00000482171 C16orf74Q96GX8 76 aa8.37□□□□□ -1.07
SMPD4-218ENST00000482171 TRAV13-2A0A0B4J235 113 aa8.37□□□□□ -1.07
SMPD4-218ENST00000482171 DMXL1Q9Y485 3027 aa8.37□□□□□ -1.07
SMPD4-218ENST00000482171 IGLV10-54A0A075B6I4 117 aa8.37□□□□□ -1.07
SMPD4-218ENST00000482171 K7EQD1 137 aa8.37□□□□□ -1.07
SMPD4-218ENST00000482171 TRIAP1O43715 76 aa8.37□□□□□ -1.07
SMPD4-218ENST00000482171 RNF152Q8N8N0 203 aa8.37□□□□□ -1.07
SMPD4-218ENST00000482171 CNFNQ9BYD5 112 aa8.37□□□□□ -1.07
SMPD4-218ENST00000482171 RNASE3P12724 160 aaKnown RBP8.37□□□□□ -1.07
SMPD4-218ENST00000482171 A0A0B4J2C4 111 aa8.36□□□□□ -1.07
SMPD4-218ENST00000482171 MGAM2Q2M2H8 2515 aa8.36□□□□□ -1.07
SMPD4-218ENST00000482171 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
SMPD4-218ENST00000482171 IGHV3-30-5P0DP03 117 aa8.36□□□□□ -1.07
SMPD4-218ENST00000482171 UBL5Q9BZL1 73 aa8.36□□□□□ -1.07
SMPD4-218ENST00000482171 IGHV1-58A0A0C4DH39 117 aa8.35□□□□□ -1.07
SMPD4-218ENST00000482171 ZNF22P17026 224 aaPredicted RBP8.35□□□□□ -1.07
SMPD4-218ENST00000482171 COX8CQ7Z4L0 72 aa8.35□□□□□ -1.07
SMPD4-218ENST00000482171 NFE4Q86UQ8 179 aa8.35□□□□□ -1.07
SMPD4-218ENST00000482171 UBE2DNLQ8IWF7 75 aa8.35□□□□□ -1.07
SMPD4-218ENST00000482171 SPANXDQ9BXN6 97 aa8.35□□□□□ -1.07
SMPD4-218ENST00000482171 Q9HAA7 133 aa8.35□□□□□ -1.07
SMPD4-218ENST00000482171 ZZEF1O43149 2961 aa8.35□□□□□ -1.07
SMPD4-218ENST00000482171 TMEM263Q8WUH6 116 aaKnown RBP8.34□□□□□ -1.07
SMPD4-218ENST00000482171 COL27A1Q8IZC6 1860 aaPredicted RBP8.34□□□□□ -1.07
SMPD4-218ENST00000482171 ZMAT4Q9H898 229 aa8.34□□□□□ -1.07
SMPD4-218ENST00000482171 TEP1Q99973 2627 aaKnown RBP8.33□□□□□ -1.08
SMPD4-218ENST00000482171 FLNCQ14315 2725 aa8.33□□□□□ -1.08
SMPD4-218ENST00000482171 SND1-IT1Q9HBX3 110 aa8.33□□□□□ -1.08
SMPD4-218ENST00000482171 IGSF10Q6WRI0 2623 aa8.33□□□□□ -1.08
SMPD4-218ENST00000482171 LOC400499M0QZD8 3231 aa8.33□□□□□ -1.08
SMPD4-218ENST00000482171 A8MZ25 164 aa8.33□□□□□ -1.08
SMPD4-218ENST00000482171 MIAQ16674 131 aa8.33□□□□□ -1.08
SMPD4-218ENST00000482171 CFAP47Q6ZTR5 3102 aa8.33□□□□□ -1.08
SMPD4-218ENST00000482171 MAST4O15021 2626 aa8.33□□□□□ -1.08
SMPD4-218ENST00000482171 KLLNB2CW77 178 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 J3KT08 172 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 ATOX1O00244 68 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 CRIP2P52943 208 aaPredicted RBP8.32□□□□□ -1.08
SMPD4-218ENST00000482171 HILS1P60008 231 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 VSIG2Q96IQ7 327 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 MUC4Q99102 2169 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 LINC00643Q86TS7 51 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 ODF3Q96PU9 254 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 TMEM223A0PJW6 202 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 ATP5G1P05496 136 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 USP34Q70CQ2 3546 aa8.32□□□□□ -1.08
SMPD4-218ENST00000482171 IGHV4-4A0A075B6R2 117 aa8.31□□□□□ -1.08
SMPD4-218ENST00000482171 SPART-AS1P0CW21 52 aa8.31□□□□□ -1.08
SMPD4-218ENST00000482171 UBE2D1P51668 147 aa8.31□□□□□ -1.08
SMPD4-218ENST00000482171 RPL32P62910 135 aaKnown RBP8.31□□□□□ -1.08
SMPD4-218ENST00000482171 COL12A1Q99715 3063 aa8.31□□□□□ -1.08
SMPD4-218ENST00000482171 IGLV4-3A0A075B6K6 122 aa8.31□□□□□ -1.08
SMPD4-218ENST00000482171 RBMY1FQ15415 496 aaKnown RBP8.31□□□□□ -1.08
SMPD4-218ENST00000482171 M0QY20 66 aa8.3□□□□□ -1.08
SMPD4-218ENST00000482171 LECT2O14960 151 aa8.3□□□□□ -1.08
SMPD4-218ENST00000482171 DAZ2Q13117 558 aaKnown RBP8.3□□□□□ -1.08
SMPD4-218ENST00000482171 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
SMPD4-218ENST00000482171 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
SMPD4-218ENST00000482171 CDKN2A-AS1Q9UH64 79 aa8.3□□□□□ -1.08
SMPD4-218ENST00000482171 TRBV30A0A0K0K1B3 111 aa8.29□□□□□ -1.08
SMPD4-218ENST00000482171 ZNF561-AS1K7EIQ3 104 aa8.29□□□□□ -1.08
SMPD4-218ENST00000482171 GHRHP01286 108 aa8.29□□□□□ -1.08
SMPD4-218ENST00000482171 ODF3L2Q3SX64 289 aa8.29□□□□□ -1.08
SMPD4-218ENST00000482171 FAM222AQ5U5X8 452 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms