RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 FHL3Q13643 280 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 ADAMTSL4-AS1Q5T5F5 129 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 C1orf158Q8N1D5 194 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 CDIP1Q9H305 208 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 CDKN2A-AS1Q9UH64 79 aa11.07□□□□□ -0.64
C9orf3-218ENST00000482056 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
C9orf3-218ENST00000482056 LINC01620Q4KN68 170 aa11.06□□□□□ -0.64
C9orf3-218ENST00000482056 DAZ4Q86SG3 579 aaKnown RBP11.06□□□□□ -0.64
C9orf3-218ENST00000482056 DAZ3Q9NR90 486 aaKnown RBP11.06□□□□□ -0.64
C9orf3-218ENST00000482056 PTPN13Q12923 2485 aa11.05□□□□□ -0.64
C9orf3-218ENST00000482056 A0A1W2PRX2 142 aa11.05□□□□□ -0.64
C9orf3-218ENST00000482056 K7EQD1 137 aa11.05□□□□□ -0.64
C9orf3-218ENST00000482056 TRIAP1O43715 76 aa11.05□□□□□ -0.64
C9orf3-218ENST00000482056 ICOSQ9Y6W8 199 aa11.05□□□□□ -0.64
C9orf3-218ENST00000482056 MYO9AB2RTY4 2548 aa11.05□□□□□ -0.64
C9orf3-218ENST00000482056 A0A1B0GV72 72 aa11.05□□□□□ -0.64
C9orf3-218ENST00000482056 A8MZ25 164 aa11.05□□□□□ -0.64
C9orf3-218ENST00000482056 KRTAP1-3Q8IUG1 177 aa11.05□□□□□ -0.64
C9orf3-218ENST00000482056 CSMD2Q7Z408 3487 aa11.04□□□□□ -0.64
C9orf3-218ENST00000482056 TRAV4A0A0B4J268 109 aa11.04□□□□□ -0.64
C9orf3-218ENST00000482056 COPS9Q8WXC6 57 aa11.04□□□□□ -0.64
C9orf3-218ENST00000482056 TMEM101Q96IK0 257 aa11.04□□□□□ -0.64
C9orf3-218ENST00000482056 CSDC2Q9Y534 153 aaKnown RBP11.04□□□□□ -0.64
C9orf3-218ENST00000482056 UBR5O95071 2799 aaPredicted RBP11.03□□□□□ -0.64
C9orf3-218ENST00000482056 CIDEAO60543 219 aa11.03□□□□□ -0.64
C9orf3-218ENST00000482056 CENPEQ02224 2701 aa11.03□□□□□ -0.64
C9orf3-218ENST00000482056 TEX15Q9BXT5 2789 aa11.03□□□□□ -0.64
C9orf3-218ENST00000482056 TRBV10-2A0A0K0K1G8 114 aa11.03□□□□□ -0.64
C9orf3-218ENST00000482056 HIST2H2BDQ6DRA6 164 aa11.03□□□□□ -0.64
C9orf3-218ENST00000482056 FAM19A3Q7Z5A8 133 aa11.03□□□□□ -0.64
C9orf3-218ENST00000482056 LINC01600Q96MT4 127 aa11.03□□□□□ -0.64
C9orf3-218ENST00000482056 NPC2P61916 151 aa11.02□□□□□ -0.65
C9orf3-218ENST00000482056 C11orf44Q8N8P7 122 aa11.02□□□□□ -0.65
C9orf3-218ENST00000482056 IGLV5-39A0A0G2JS06 123 aa11.01□□□□□ -0.65
C9orf3-218ENST00000482056 LINC00242Q5T6M2 205 aa11.01□□□□□ -0.65
C9orf3-218ENST00000482056 Q6ZTI0 123 aa11.01□□□□□ -0.65
C9orf3-218ENST00000482056 USP24Q9UPU5 2620 aa11.01□□□□□ -0.65
C9orf3-218ENST00000482056 RPL13AP40429 203 aaKnown RBP11□□□□□ -0.65
C9orf3-218ENST00000482056 COX6A2Q02221 97 aa11□□□□□ -0.65
C9orf3-218ENST00000482056 ABCA12Q86UK0 2595 aa11□□□□□ -0.65
C9orf3-218ENST00000482056 UBE2L6O14933 153 aa10.99□□□□□ -0.65
C9orf3-218ENST00000482056 NTN5Q8WTR8 489 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-218ENST00000482056 C16orf74Q96GX8 76 aa10.99□□□□□ -0.65
C9orf3-218ENST00000482056 Q9H8V8 135 aa10.99□□□□□ -0.65
C9orf3-218ENST00000482056 MT-ATP8P03928 68 aa10.99□□□□□ -0.65
C9orf3-218ENST00000482056 LINC00694P0DN24 101 aa10.99□□□□□ -0.65
C9orf3-218ENST00000482056 XGP55808 180 aa10.99□□□□□ -0.65
C9orf3-218ENST00000482056 ZFYVE26Q68DK2 2539 aa10.98□□□□□ -0.65
C9orf3-218ENST00000482056 TRAV13-1A0A0B4J241 112 aa10.98□□□□□ -0.65
C9orf3-218ENST00000482056 GAGE12JA6NER3 117 aa10.98□□□□□ -0.65
C9orf3-218ENST00000482056 GAGE4Q13068 117 aa10.98□□□□□ -0.65
C9orf3-218ENST00000482056 GAGE5Q13069 117 aa10.98□□□□□ -0.65
C9orf3-218ENST00000482056 C2orf82Q6UX34 121 aa10.98□□□□□ -0.65
C9orf3-218ENST00000482056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-218ENST00000482056 CITED2Q99967 270 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-218ENST00000482056 NOP10Q9NPE3 64 aaKnown RBP10.98□□□□□ -0.65
C9orf3-218ENST00000482056 H3BT86 120 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 CKS1BP61024 79 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 UBE2WQ96B02 151 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 TMEM243Q9BU79 118 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 SMIM1B2RUZ4 78 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 HERV-K104P63124 156 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 NTM-AS1Q6ZSK4 140 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 DAND5Q8N907 189 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 WFDC11Q8NEX6 87 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 LINC00308Q8TCZ7 52 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 CDC42SE2Q9NRR3 84 aa10.97□□□□□ -0.65
C9orf3-218ENST00000482056 FAM110AQ9BQ89 295 aa10.96□□□□□ -0.65
C9orf3-218ENST00000482056 ESM1Q9NQ30 184 aa10.96□□□□□ -0.65
C9orf3-218ENST00000482056 TRGV2A0A075B6R0 118 aa10.96□□□□□ -0.66
C9orf3-218ENST00000482056 H7C423 109 aa10.96□□□□□ -0.66
C9orf3-218ENST00000482056 LST1O00453 97 aa10.96□□□□□ -0.66
C9orf3-218ENST00000482056 MEIG1Q5JSS6 88 aa10.95□□□□□ -0.66
C9orf3-218ENST00000482056 PRIMA1Q86XR5 153 aa10.95□□□□□ -0.66
C9orf3-218ENST00000482056 C16orf95Q9H693 158 aa10.95□□□□□ -0.66
C9orf3-218ENST00000482056 WNK1Q9H4A3 2382 aa10.94□□□□□ -0.66
C9orf3-218ENST00000482056 TRAV8-4A0A0B4J246 113 aa10.94□□□□□ -0.66
C9orf3-218ENST00000482056 CLEC2BQ92478 149 aa10.94□□□□□ -0.66
C9orf3-218ENST00000482056 CHD6Q8TD26 2715 aa10.93□□□□□ -0.66
C9orf3-218ENST00000482056 TRBV6-4A0A1B0GX49 114 aa10.93□□□□□ -0.66
C9orf3-218ENST00000482056 RNASE1P07998 156 aaKnown RBP10.93□□□□□ -0.66
C9orf3-218ENST00000482056 LINC01006Q8NI28 216 aa10.93□□□□□ -0.66
C9orf3-218ENST00000482056 ZNF625Q96I27 306 aaPredicted RBP10.93□□□□□ -0.66
C9orf3-218ENST00000482056 TEX49A0A1B0GTD5 131 aa10.92□□□□□ -0.66
C9orf3-218ENST00000482056 GAGE7O76087 117 aa10.92□□□□□ -0.66
C9orf3-218ENST00000482056 NDUFA7O95182 113 aa10.92□□□□□ -0.66
C9orf3-218ENST00000482056 GAGE12FP0CL80 117 aa10.92□□□□□ -0.66
C9orf3-218ENST00000482056 GAGE12GP0CL81 117 aa10.92□□□□□ -0.66
C9orf3-218ENST00000482056 GAGE12IP0CL82 117 aa10.92□□□□□ -0.66
C9orf3-218ENST00000482056 TRGV4A0A0C4DH28 118 aa10.92□□□□□ -0.66
C9orf3-218ENST00000482056 F5H768 121 aa10.92□□□□□ -0.66
C9orf3-218ENST00000482056 GIG44P09565 113 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-218ENST00000482056 RPL35AP18077 110 aaKnown RBP10.92□□□□□ -0.66
C9orf3-218ENST00000482056 OVOL2Q9BRP0 275 aa10.92□□□□□ -0.66
C9orf3-218ENST00000482056 PPDPFQ9H3Y8 114 aa10.92□□□□□ -0.66
C9orf3-218ENST00000482056 TLN2Q9Y4G6 2542 aa10.91□□□□□ -0.66
C9orf3-218ENST00000482056 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
C9orf3-218ENST00000482056 ITPR3Q14573 2671 aa10.91□□□□□ -0.66
C9orf3-218ENST00000482056 A0A0U1RRA0 63 aa10.9□□□□□ -0.66
C9orf3-218ENST00000482056 SNCGO76070 127 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms