RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 B9D2Q9BPU9 175 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 FASNP49327 2511 aaKnown RBP7.08□□□□□ -1.28
GARNL3-216ENST00000481242 COL5A1P20908 1838 aaPredicted RBP7.08□□□□□ -1.28
GARNL3-216ENST00000481242 NDUFC1O43677 76 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 ZNF80P51504 273 aaPredicted RBP7.08□□□□□ -1.28
GARNL3-216ENST00000481242 C1orf229Q6ZS94 237 aaPredicted RBP7.08□□□□□ -1.28
GARNL3-216ENST00000481242 LINC00526Q96FQ7 95 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 TP53TG3Q9ULZ0 132 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 CFAP126Q5VTH2 177 aa7.07□□□□□ -1.28
GARNL3-216ENST00000481242 MRGPRG-AS1Q2M3A8 158 aa7.07□□□□□ -1.28
GARNL3-216ENST00000481242 MIR7-3HGQ8N6C7 128 aa7.07□□□□□ -1.28
GARNL3-216ENST00000481242 FN1P02751 2386 aaKnown RBP7.07□□□□□ -1.28
GARNL3-216ENST00000481242 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
GARNL3-216ENST00000481242 RS1O15537 224 aa7.07□□□□□ -1.28
GARNL3-216ENST00000481242 ATP5EP2Q5VTU8 51 aa7.07□□□□□ -1.28
GARNL3-216ENST00000481242 LINC00694P0DN24 101 aa7.06□□□□□ -1.28
GARNL3-216ENST00000481242 SPTBN4Q9H254 2564 aa7.06□□□□□ -1.28
GARNL3-216ENST00000481242 BRI3O95415 125 aa7.06□□□□□ -1.28
GARNL3-216ENST00000481242 FRMD6-AS1P0C7T7 363 aa7.06□□□□□ -1.28
GARNL3-216ENST00000481242 MIAQ16674 131 aa7.06□□□□□ -1.28
GARNL3-216ENST00000481242 LRP4O75096 1905 aa7.06□□□□□ -1.28
GARNL3-216ENST00000481242 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
GARNL3-216ENST00000481242 LINC00269Q8N2A0 174 aa7.06□□□□□ -1.28
GARNL3-216ENST00000481242 SERP2Q8N6R1 65 aa7.06□□□□□ -1.28
GARNL3-216ENST00000481242 TRBV6-8A0A0A6YYG3 113 aa7.06□□□□□ -1.28
GARNL3-216ENST00000481242 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.06□□□□□ -1.28
GARNL3-216ENST00000481242 P0DMU3 169 aa7.05□□□□□ -1.28
GARNL3-216ENST00000481242 FAM231AP0DMU4 169 aa7.05□□□□□ -1.28
GARNL3-216ENST00000481242 FAM231CP0DMU5 169 aa7.05□□□□□ -1.28
GARNL3-216ENST00000481242 CRIP2P52943 208 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-216ENST00000481242 TRBV6-5A0A0K0K1A5 114 aa7.05□□□□□ -1.28
GARNL3-216ENST00000481242 CHCHD10Q8WYQ3 142 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-216ENST00000481242 C2orf91Q6ZV80 131 aa7.05□□□□□ -1.28
GARNL3-216ENST00000481242 NREPQ16612 68 aa7.04□□□□□ -1.28
GARNL3-216ENST00000481242 TMEM256-PLSCR3K7ERE1 68 aa7.04□□□□□ -1.28
GARNL3-216ENST00000481242 Q8N976 141 aa7.04□□□□□ -1.28
GARNL3-216ENST00000481242 NDUFS5O43920 106 aa7.04□□□□□ -1.28
GARNL3-216ENST00000481242 LINC00322Q6ZN03 302 aaPredicted RBP7.04□□□□□ -1.28
GARNL3-216ENST00000481242 COX7BP24311 80 aa7.04□□□□□ -1.28
GARNL3-216ENST00000481242 IGHV4-4A0A075B6R2 117 aa7.03□□□□□ -1.28
GARNL3-216ENST00000481242 LINC00482Q8N8I6 264 aa7.03□□□□□ -1.28
GARNL3-216ENST00000481242 PYGO1Q9Y3Y4 419 aa7.03□□□□□ -1.28
GARNL3-216ENST00000481242 IBA57-AS1B1ANH7 110 aa7.03□□□□□ -1.28
GARNL3-216ENST00000481242 NEXN-AS1Q8NBZ9 246 aa7.03□□□□□ -1.28
GARNL3-216ENST00000481242 IGHV4-28A0A0C4DH34 117 aa7.03□□□□□ -1.28
GARNL3-216ENST00000481242 KLLNB2CW77 178 aa7.03□□□□□ -1.28
GARNL3-216ENST00000481242 M0QY20 66 aa7.03□□□□□ -1.28
GARNL3-216ENST00000481242 TCL1BO95988 128 aa7.03□□□□□ -1.28
GARNL3-216ENST00000481242 C10orf99Q6UWK7 81 aa7.03□□□□□ -1.28
GARNL3-216ENST00000481242 SERP1Q9Y6X1 66 aa7.02□□□□□ -1.29
GARNL3-216ENST00000481242 A0A0J9YXY3 114 aa7.02□□□□□ -1.29
GARNL3-216ENST00000481242 TRBV27A0A0K0K1C4 114 aa7.02□□□□□ -1.29
GARNL3-216ENST00000481242 F8WDY8 70 aa7.02□□□□□ -1.29
GARNL3-216ENST00000481242 CDSNQ15517 529 aa7.02□□□□□ -1.29
GARNL3-216ENST00000481242 HIGD2BQ4VC39 106 aa7.02□□□□□ -1.29
GARNL3-216ENST00000481242 LELP1Q5T871 98 aa7.02□□□□□ -1.29
GARNL3-216ENST00000481242 GDF5OSQ5U4N7 250 aa7.02□□□□□ -1.29
GARNL3-216ENST00000481242 MUC7Q8TAX7 377 aa7.02□□□□□ -1.29
GARNL3-216ENST00000481242 C16orf95Q9H693 158 aa7.02□□□□□ -1.29
GARNL3-216ENST00000481242 NCR3O14931 201 aa7.01□□□□□ -1.29
GARNL3-216ENST00000481242 LECT2O14960 151 aa7.01□□□□□ -1.29
GARNL3-216ENST00000481242 IGKV2-24A0A0C4DH68 120 aa7.01□□□□□ -1.29
GARNL3-216ENST00000481242 MP68P56378 58 aa7.01□□□□□ -1.29
GARNL3-216ENST00000481242 SYCNQ0VAF6 134 aa7.01□□□□□ -1.29
GARNL3-216ENST00000481242 C7orf33Q8WU49 177 aa7.01□□□□□ -1.29
GARNL3-216ENST00000481242 LINC00467Q9BRT7 94 aa7.01□□□□□ -1.29
GARNL3-216ENST00000481242 CHCHD7Q9BUK0 85 aa7.01□□□□□ -1.29
GARNL3-216ENST00000481242 KPRPQ5T749 579 aaPredicted RBP7.01□□□□□ -1.29
GARNL3-216ENST00000481242 HIST2H2BDQ6DRA6 164 aa7.01□□□□□ -1.29
GARNL3-216ENST00000481242 SETD2Q9BYW2 2564 aaPredicted RBP7□□□□□ -1.29
GARNL3-216ENST00000481242 DCANP1Q8TF63 244 aa7□□□□□ -1.29
GARNL3-216ENST00000481242 AVPP01185 164 aa7□□□□□ -1.29
GARNL3-216ENST00000481242 IGLV4-3A0A075B6K6 122 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 WIPF1O43516 503 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 HRCT1Q6UXD1 115 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 PPDPFQ9H3Y8 114 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 TP73-AS1Q9UF72 201 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 DAND5Q8N907 189 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 U3KQK5 164 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 CDKN2A-AS1Q9UH64 79 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 IGLV1-51P01701 117 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 KRTAP10-9P60411 292 aa6.99□□□□□ -1.29
GARNL3-216ENST00000481242 CEMP1Q6PRD7 247 aaPredicted RBP6.99□□□□□ -1.29
GARNL3-216ENST00000481242 BBC3Q96PG8 261 aaPredicted RBP6.98□□□□□ -1.29
GARNL3-216ENST00000481242 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
GARNL3-216ENST00000481242 C9orf85Q96MD7 179 aa6.98□□□□□ -1.29
GARNL3-216ENST00000481242 NUPR2A6NF83 97 aa6.98□□□□□ -1.29
GARNL3-216ENST00000481242 HIGD2AQ9BW72 106 aa6.98□□□□□ -1.29
GARNL3-216ENST00000481242 PTPRSQ13332 1948 aa6.97□□□□□ -1.29
GARNL3-216ENST00000481242 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
GARNL3-216ENST00000481242 IGHV4-30-4P0DP06 118 aa6.97□□□□□ -1.29
GARNL3-216ENST00000481242 KIAA1549Q9HCM3 1950 aa6.97□□□□□ -1.29
GARNL3-216ENST00000481242 ZNF22P17026 224 aaPredicted RBP6.97□□□□□ -1.29
GARNL3-216ENST00000481242 CRIP1P50238 77 aa6.97□□□□□ -1.29
GARNL3-216ENST00000481242 LINC00474Q9P2X8 69 aa6.97□□□□□ -1.29
GARNL3-216ENST00000481242 HCFC1P51610 2035 aa6.97□□□□□ -1.29
GARNL3-216ENST00000481242 A0A087WZ39 114 aa6.97□□□□□ -1.29
GARNL3-216ENST00000481242 IGLV2-11P01706 119 aa6.96□□□□□ -1.29
GARNL3-216ENST00000481242 RNASE3P12724 160 aaKnown RBP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms