RNA–Protein interactions for RNA: ENST00000481110.6

FGFR3-208, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best) BASIC

Gene FGFR3, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-208ENST00000481110 K7EQD1 137 aa12.29□□□□□ -0.44
FGFR3-208ENST00000481110 LINC01620Q4KN68 170 aa12.29□□□□□ -0.44
FGFR3-208ENST00000481110 TACC2O95359 2948 aa12.28□□□□□ -0.44
FGFR3-208ENST00000481110 INAFM1C9JVW0 142 aa12.28□□□□□ -0.44
FGFR3-208ENST00000481110 APOC4P55056 127 aa12.28□□□□□ -0.44
FGFR3-208ENST00000481110 KALRNO60229 2985 aa12.27□□□□□ -0.44
FGFR3-208ENST00000481110 RNF152Q8N8N0 203 aa12.27□□□□□ -0.44
FGFR3-208ENST00000481110 CLEC2BQ92478 149 aa12.27□□□□□ -0.45
FGFR3-208ENST00000481110 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
FGFR3-208ENST00000481110 KLLNB2CW77 178 aa12.26□□□□□ -0.45
FGFR3-208ENST00000481110 LINC01006Q8NI28 216 aa12.26□□□□□ -0.45
FGFR3-208ENST00000481110 TNRC18O15417 2968 aaPredicted RBP12.26□□□□□ -0.45
FGFR3-208ENST00000481110 M0QY20 66 aa12.26□□□□□ -0.45
FGFR3-208ENST00000481110 LOC400499M0QZD8 3231 aa12.26□□□□□ -0.45
FGFR3-208ENST00000481110 XGP55808 180 aa12.26□□□□□ -0.45
FGFR3-208ENST00000481110 C16orf74Q96GX8 76 aa12.26□□□□□ -0.45
FGFR3-208ENST00000481110 COL12A1Q99715 3063 aa12.25□□□□□ -0.45
FGFR3-208ENST00000481110 TEX49A0A1B0GTD5 131 aa12.25□□□□□ -0.45
FGFR3-208ENST00000481110 NEXN-AS1Q8NBZ9 246 aa12.24□□□□□ -0.45
FGFR3-208ENST00000481110 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
FGFR3-208ENST00000481110 WDFY3Q8IZQ1 3526 aa12.24□□□□□ -0.45
FGFR3-208ENST00000481110 DNAJC30Q96LL9 226 aa12.23□□□□□ -0.45
FGFR3-208ENST00000481110 C9orf66Q5T8R8 295 aa12.23□□□□□ -0.45
FGFR3-208ENST00000481110 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
FGFR3-208ENST00000481110 CNFNQ9BYD5 112 aa12.23□□□□□ -0.45
FGFR3-208ENST00000481110 LINC00482Q8N8I6 264 aa12.22□□□□□ -0.45
FGFR3-208ENST00000481110 ODF3Q96PU9 254 aa12.22□□□□□ -0.45
FGFR3-208ENST00000481110 IGHV3-30-3P0DP02 117 aa12.22□□□□□ -0.45
FGFR3-208ENST00000481110 LINC00467Q9BRT7 94 aa12.22□□□□□ -0.45
FGFR3-208ENST00000481110 CRYGDP07320 174 aa12.21□□□□□ -0.45
FGFR3-208ENST00000481110 DAZ2Q13117 558 aaKnown RBP12.21□□□□□ -0.45
FGFR3-208ENST00000481110 DAZ4Q86SG3 579 aaKnown RBP12.21□□□□□ -0.45
FGFR3-208ENST00000481110 DAZ3Q9NR90 486 aaKnown RBP12.21□□□□□ -0.45
FGFR3-208ENST00000481110 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.45
FGFR3-208ENST00000481110 FAM236AA0A1B0GUQ0 79 aa12.2□□□□□ -0.46
FGFR3-208ENST00000481110 FAM236BA0A1B0GV22 79 aa12.2□□□□□ -0.46
FGFR3-208ENST00000481110 CFAP126Q5VTH2 177 aa12.2□□□□□ -0.46
FGFR3-208ENST00000481110 ICOSQ9Y6W8 199 aa12.19□□□□□ -0.46
FGFR3-208ENST00000481110 VSIG2Q96IQ7 327 aa12.19□□□□□ -0.46
FGFR3-208ENST00000481110 CITED1Q99966 193 aa12.19□□□□□ -0.46
FGFR3-208ENST00000481110 CDKN2A-AS1Q9UH64 79 aa12.19□□□□□ -0.46
FGFR3-208ENST00000481110 SPATA25Q9BR10 227 aa12.19□□□□□ -0.46
FGFR3-208ENST00000481110 IGLV4-3A0A075B6K6 122 aa12.18□□□□□ -0.46
FGFR3-208ENST00000481110 A8MZ25 164 aa12.18□□□□□ -0.46
FGFR3-208ENST00000481110 CRIP2P52943 208 aaPredicted RBP12.18□□□□□ -0.46
FGFR3-208ENST00000481110 Q9HAA7 133 aa12.18□□□□□ -0.46
FGFR3-208ENST00000481110 SLC25A29Q8N8R3 303 aa12.18□□□□□ -0.46
FGFR3-208ENST00000481110 POLR2KP53803 58 aaKnown RBP12.17□□□□□ -0.46
FGFR3-208ENST00000481110 TRBV27A0A0K0K1C4 114 aa12.17□□□□□ -0.46
FGFR3-208ENST00000481110 TINCRA0A1B0GVN0 87 aa12.17□□□□□ -0.46
FGFR3-208ENST00000481110 IGHV4-4A0A075B6R2 117 aa12.17□□□□□ -0.46
FGFR3-208ENST00000481110 HERV-K104P63124 156 aa12.17□□□□□ -0.46
FGFR3-208ENST00000481110 FLNCQ14315 2725 aa12.17□□□□□ -0.46
FGFR3-208ENST00000481110 ZNF561-AS1K7EIQ3 104 aa12.16□□□□□ -0.46
FGFR3-208ENST00000481110 LY6G6DO95868 133 aa12.16□□□□□ -0.46
FGFR3-208ENST00000481110 NDUFV3P56181 108 aaKnown RBP12.16□□□□□ -0.46
FGFR3-208ENST00000481110 MRPL23Q16540 153 aaKnown RBP12.16□□□□□ -0.46
FGFR3-208ENST00000481110 TRAV4A0A0B4J268 109 aa12.16□□□□□ -0.46
FGFR3-208ENST00000481110 ATP5G1P05496 136 aa12.16□□□□□ -0.46
FGFR3-208ENST00000481110 ZNF22P17026 224 aaPredicted RBP12.15□□□□□ -0.46
FGFR3-208ENST00000481110 ODF3L2Q3SX64 289 aa12.15□□□□□ -0.46
FGFR3-208ENST00000481110 IGHV1-58A0A0C4DH39 117 aa12.15□□□□□ -0.46
FGFR3-208ENST00000481110 SOCS3O14543 225 aa12.15□□□□□ -0.46
FGFR3-208ENST00000481110 SPART-AS1P0CW21 52 aa12.15□□□□□ -0.46
FGFR3-208ENST00000481110 C9orf85Q96MD7 179 aa12.14□□□□□ -0.47
FGFR3-208ENST00000481110 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
FGFR3-208ENST00000481110 IGHV3-33P01772 117 aa12.14□□□□□ -0.47
FGFR3-208ENST00000481110 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
FGFR3-208ENST00000481110 LAMTOR3Q9UHA4 124 aa12.14□□□□□ -0.47
FGFR3-208ENST00000481110 TRBV10-2A0A0K0K1G8 114 aa12.14□□□□□ -0.47
FGFR3-208ENST00000481110 BAALC-AS2P0C853 105 aa12.14□□□□□ -0.47
FGFR3-208ENST00000481110 FAM222AQ5U5X8 452 aa12.13□□□□□ -0.47
FGFR3-208ENST00000481110 COL27A1Q8IZC6 1860 aaPredicted RBP12.13□□□□□ -0.47
FGFR3-208ENST00000481110 TRBV10-1A0A0K0K1A3 114 aa12.13□□□□□ -0.47
FGFR3-208ENST00000481110 COX8CQ7Z4L0 72 aa12.13□□□□□ -0.47
FGFR3-208ENST00000481110 TSHBP01222 138 aa12.13□□□□□ -0.47
FGFR3-208ENST00000481110 NFE4Q86UQ8 179 aa12.13□□□□□ -0.47
FGFR3-208ENST00000481110 UBE2DNLQ8IWF7 75 aa12.13□□□□□ -0.47
FGFR3-208ENST00000481110 LOC100131303A0A0U1RQF7 123 aa12.12□□□□□ -0.47
FGFR3-208ENST00000481110 PLA2G2AP14555 144 aa12.12□□□□□ -0.47
FGFR3-208ENST00000481110 A0A0J9YXY3 114 aa12.11□□□□□ -0.47
FGFR3-208ENST00000481110 SND1-IT1Q9HBX3 110 aa12.11□□□□□ -0.47
FGFR3-208ENST00000481110 IGKV3D-7A0A0C4DH55 119 aa12.11□□□□□ -0.47
FGFR3-208ENST00000481110 SETXQ7Z333 2677 aaKnown RBP12.11□□□□□ -0.47
FGFR3-208ENST00000481110 TRIAP1O43715 76 aa12.1□□□□□ -0.47
FGFR3-208ENST00000481110 PRO0255Q9UI72 69 aa12.1□□□□□ -0.47
FGFR3-208ENST00000481110 TRBV6-5A0A0K0K1A5 114 aa12.1□□□□□ -0.47
FGFR3-208ENST00000481110 CCDC179H3BU77 68 aa12.1□□□□□ -0.47
FGFR3-208ENST00000481110 KLK12Q9UKR0 248 aa12.1□□□□□ -0.47
FGFR3-208ENST00000481110 INAFM2P0DMQ5 153 aa12.1□□□□□ -0.47
FGFR3-208ENST00000481110 COX7B2Q8TF08 81 aa12.09□□□□□ -0.47
FGFR3-208ENST00000481110 IGSF10Q6WRI0 2623 aa12.09□□□□□ -0.47
FGFR3-208ENST00000481110 TEX15Q9BXT5 2789 aa12.09□□□□□ -0.47
FGFR3-208ENST00000481110 IGKV2D-24A0A075B6R9 120 aa12.09□□□□□ -0.47
FGFR3-208ENST00000481110 MIR7-3HGQ8N6C7 128 aa12.08□□□□□ -0.48
FGFR3-208ENST00000481110 PSCAO43653 123 aa12.08□□□□□ -0.48
FGFR3-208ENST00000481110 HILS1P60008 231 aa12.08□□□□□ -0.48
FGFR3-208ENST00000481110 ZMAT4Q9H898 229 aa12.08□□□□□ -0.48
FGFR3-208ENST00000481110 TRAV13-2A0A0B4J235 113 aa12.07□□□□□ -0.48
FGFR3-208ENST00000481110 FAM110AQ9BQ89 295 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms