RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 FAM231AP0DMU4 169 aa7.23□□□□□ -1.25
VEGFA-212ENST00000480614 FAM231CP0DMU5 169 aa7.23□□□□□ -1.25
VEGFA-212ENST00000480614 NUPR1O60356 82 aa7.23□□□□□ -1.25
VEGFA-212ENST00000480614 ESM1Q9NQ30 184 aa7.23□□□□□ -1.25
VEGFA-212ENST00000480614 TCL1BO95988 128 aa7.22□□□□□ -1.25
VEGFA-212ENST00000480614 ADORA2A-AS1P86434 159 aa7.22□□□□□ -1.25
VEGFA-212ENST00000480614 Q8N7P7 452 aa7.22□□□□□ -1.25
VEGFA-212ENST00000480614 DEFB4AO15263 64 aa7.22□□□□□ -1.25
VEGFA-212ENST00000480614 MUC7Q8TAX7 377 aa7.22□□□□□ -1.25
VEGFA-212ENST00000480614 CHCHD10Q8WYQ3 142 aaPredicted RBP7.22□□□□□ -1.25
VEGFA-212ENST00000480614 ODF3BA8MYP8 253 aa7.22□□□□□ -1.25
VEGFA-212ENST00000480614 HIGD2AQ9BW72 106 aa7.22□□□□□ -1.25
VEGFA-212ENST00000480614 TIMM17BO60830 172 aa7.22□□□□□ -1.25
VEGFA-212ENST00000480614 LINC00269Q8N2A0 174 aa7.22□□□□□ -1.25
VEGFA-212ENST00000480614 FAM222AQ5U5X8 452 aa7.21□□□□□ -1.25
VEGFA-212ENST00000480614 FAM19A1Q7Z5A9 133 aa7.21□□□□□ -1.25
VEGFA-212ENST00000480614 IGKV2-24A0A0C4DH68 120 aa7.21□□□□□ -1.26
VEGFA-212ENST00000480614 IGF1P05019 195 aa7.21□□□□□ -1.26
VEGFA-212ENST00000480614 UNQ9165/PRO28630Q6UXU0 137 aa7.2□□□□□ -1.26
VEGFA-212ENST00000480614 PTH2Q96A98 100 aa7.2□□□□□ -1.26
VEGFA-212ENST00000480614 SPRNQ5BIV9 151 aa7.2□□□□□ -1.26
VEGFA-212ENST00000480614 ODF3L1Q8IXM7 274 aa7.2□□□□□ -1.26
VEGFA-212ENST00000480614 LINC00467Q9BRT7 94 aa7.19□□□□□ -1.26
VEGFA-212ENST00000480614 DEFB131BA0A096LNP1 70 aa7.19□□□□□ -1.26
VEGFA-212ENST00000480614 SYCNQ0VAF6 134 aa7.19□□□□□ -1.26
VEGFA-212ENST00000480614 CCDC140Q96MF4 163 aa7.19□□□□□ -1.26
VEGFA-212ENST00000480614 MT-ATP8P03928 68 aa7.19□□□□□ -1.26
VEGFA-212ENST00000480614 COX17Q14061 63 aa7.19□□□□□ -1.26
VEGFA-212ENST00000480614 TRAV10A0A0B4J240 114 aa7.19□□□□□ -1.26
VEGFA-212ENST00000480614 P0C879 139 aa7.19□□□□□ -1.26
VEGFA-212ENST00000480614 LINC00474Q9P2X8 69 aa7.19□□□□□ -1.26
VEGFA-212ENST00000480614 IGLV2-14P01704 120 aa7.19□□□□□ -1.26
VEGFA-212ENST00000480614 LINC00322Q6ZN03 302 aaPredicted RBP7.19□□□□□ -1.26
VEGFA-212ENST00000480614 Q6YL49 198 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 UBE2D1P51668 147 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 TRBV30A0A0K0K1B3 111 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 FAM19A3Q7Z5A8 133 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 PLA2G2EQ9NZK7 142 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 K7EQG2 157 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 DEFB114Q30KQ6 69 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 NEXN-AS1Q8NBZ9 246 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 SERP1Q9Y6X1 66 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 SHISA2Q6UWI4 295 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 SDIM1Q6ZPB5 146 aa7.18□□□□□ -1.26
VEGFA-212ENST00000480614 PIK3CD-AS1Q5SR53 167 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 MRPS36P82909 103 aaKnown RBP7.17□□□□□ -1.26
VEGFA-212ENST00000480614 IGKV1D-37A0A075B6S9 117 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 Q6ZTI0 123 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 TEX49A0A1B0GTD5 131 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 U3KQK5 164 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 IGLC6P0CF74 106 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 UBE2D4Q9Y2X8 147 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 TMEM223A0PJW6 202 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 LYPD6Q86Y78 171 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 C11orf1Q9H5F2 150 aa7.17□□□□□ -1.26
VEGFA-212ENST00000480614 STAB1Q9NY15 2570 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 TRBV6-4A0A1B0GX49 114 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 TRBV6-8A0A0A6YYG3 113 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 CFAP126Q5VTH2 177 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 C20orf173Q96LM9 149 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 YPEL4Q96NS1 127 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 LINC00308Q8TCZ7 52 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 ENHOQ6UWT2 76 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 CCKP06307 115 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 PYGO1Q9Y3Y4 419 aa7.16□□□□□ -1.26
VEGFA-212ENST00000480614 WT1P19544 449 aaPredicted RBP7.15□□□□□ -1.26
VEGFA-212ENST00000480614 ZNF22P17026 224 aaPredicted RBP7.15□□□□□ -1.26
VEGFA-212ENST00000480614 WFDC10BQ8IUB3 73 aa7.15□□□□□ -1.26
VEGFA-212ENST00000480614 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.15□□□□□ -1.26
VEGFA-212ENST00000480614 M0QY20 66 aa7.15□□□□□ -1.26
VEGFA-212ENST00000480614 SERP2Q8N6R1 65 aa7.15□□□□□ -1.26
VEGFA-212ENST00000480614 Q6Q795 121 aa7.15□□□□□ -1.26
VEGFA-212ENST00000480614 Q8N9L7 120 aa7.15□□□□□ -1.27
VEGFA-212ENST00000480614 TP73-AS1Q9UF72 201 aa7.15□□□□□ -1.27
VEGFA-212ENST00000480614 IGHV4-31P0DP07 118 aa7.15□□□□□ -1.27
VEGFA-212ENST00000480614 UBE2D3P61077 147 aa7.15□□□□□ -1.27
VEGFA-212ENST00000480614 CFAP46Q8IYW2 2715 aa7.15□□□□□ -1.27
VEGFA-212ENST00000480614 CDKN2A-AS1Q9UH64 79 aa7.15□□□□□ -1.27
VEGFA-212ENST00000480614 LMO4P61968 165 aa7.14□□□□□ -1.27
VEGFA-212ENST00000480614 A6NED7 52 aa7.14□□□□□ -1.27
VEGFA-212ENST00000480614 M0R378 163 aa7.14□□□□□ -1.27
VEGFA-212ENST00000480614 LRCOL1A6NCL2 159 aa7.14□□□□□ -1.27
VEGFA-212ENST00000480614 DEFB1P60022 68 aa7.14□□□□□ -1.27
VEGFA-212ENST00000480614 IGLV4-3A0A075B6K6 122 aa7.14□□□□□ -1.27
VEGFA-212ENST00000480614 LOC107984640A0A0U1RRK4 108 aa7.14□□□□□ -1.27
VEGFA-212ENST00000480614 NRGNQ92686 78 aa7.14□□□□□ -1.27
VEGFA-212ENST00000480614 C9orf85Q96MD7 179 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 C1orf158Q8N1D5 194 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 LELP1Q5T871 98 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 EBI3Q14213 229 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 MPLKIPQ8TAP9 179 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 FAM19A5Q7Z5A7 132 aaPredicted RBP7.13□□□□□ -1.27
VEGFA-212ENST00000480614 PRORYQ9H606 182 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 TRBV27A0A0K0K1C4 114 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 E7EUB6 86 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 PCSK5Q92824 1860 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 TRIAP1O43715 76 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 TTTY13Q9BZ97 58 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms