RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 PRDM2Q13029 1718 aa2.22□□□□□ -2.05
SGIP1-209ENST00000480548 MED13LQ71F56 2210 aa2.22□□□□□ -2.05
SGIP1-209ENST00000480548 UQCRHP07919 91 aa2.22□□□□□ -2.05
SGIP1-209ENST00000480548 NMBP08949 121 aa2.22□□□□□ -2.05
SGIP1-209ENST00000480548 S100A16Q96FQ6 103 aaKnown RBP2.22□□□□□ -2.05
SGIP1-209ENST00000480548 KDM5AP29375 1690 aaKnown RBP2.22□□□□□ -2.05
SGIP1-209ENST00000480548 ABCA1O95477 2261 aa2.21□□□□□ -2.06
SGIP1-209ENST00000480548 ARHGAP35Q9NRY4 1499 aa2.21□□□□□ -2.06
SGIP1-209ENST00000480548 A0A096LNT2 108 aa2.21□□□□□ -2.06
SGIP1-209ENST00000480548 UQCR11O14957 56 aa2.21□□□□□ -2.06
SGIP1-209ENST00000480548 LY6G6CO95867 125 aa2.21□□□□□ -2.06
SGIP1-209ENST00000480548 PMCHL1Q16048 86 aa2.21□□□□□ -2.06
SGIP1-209ENST00000480548 BAGE2Q86Y30 109 aa2.21□□□□□ -2.06
SGIP1-209ENST00000480548 LINC01558Q9Y6Z2 57 aa2.21□□□□□ -2.06
SGIP1-209ENST00000480548 ARHGEF12Q9NZN5 1544 aa2.21□□□□□ -2.06
SGIP1-209ENST00000480548 TOP2BQ02880 1626 aa2.2□□□□□ -2.06
SGIP1-209ENST00000480548 F2Z2F3 143 aa2.2□□□□□ -2.06
SGIP1-209ENST00000480548 PRB1P04280 392 aa2.2□□□□□ -2.06
SGIP1-209ENST00000480548 FAM223AQ8IWN6 122 aa2.2□□□□□ -2.06
SGIP1-209ENST00000480548 SORL1Q92673 2214 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 UACAQ9BZF9 1416 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 LOC285556D6RIA3 1793 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 HMGXB3Q12766 1538 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 TRBV25-1A0A075B6N4 114 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 C10orf142B7Z368 130 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 SAA2P0DJI9 122 aaPredicted RBP2.19□□□□□ -2.06
SGIP1-209ENST00000480548 ZNF137PP52743 207 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 Q6ZSA8 131 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 PLIN4Q96Q06 1357 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 SBF2Q86WG5 1849 aa2.19□□□□□ -2.06
SGIP1-209ENST00000480548 MYOM1P52179 1685 aa2.18□□□□□ -2.06
SGIP1-209ENST00000480548 ZMYM4Q5VZL5 1548 aa2.18□□□□□ -2.06
SGIP1-209ENST00000480548 EHBP1L1Q8N3D4 1523 aa2.18□□□□□ -2.06
SGIP1-209ENST00000480548 TDRG1Q3Y452 100 aa2.18□□□□□ -2.06
SGIP1-209ENST00000480548 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.18□□□□□ -2.06
SGIP1-209ENST00000480548 SMIM4Q8WVI0 70 aa2.18□□□□□ -2.06
SGIP1-209ENST00000480548 SIPA1L3O60292 1781 aaPredicted RBP2.18□□□□□ -2.06
SGIP1-209ENST00000480548 H3BQF6 201 aa2.17□□□□□ -2.06
SGIP1-209ENST00000480548 ANGP03950 147 aaKnown RBP2.17□□□□□ -2.06
SGIP1-209ENST00000480548 HIGD1BQ9P298 99 aa2.17□□□□□ -2.06
SGIP1-209ENST00000480548 DIP2CQ9Y2E4 1556 aa2.17□□□□□ -2.06
SGIP1-209ENST00000480548 COL4A6Q14031 1691 aa2.17□□□□□ -2.06
SGIP1-209ENST00000480548 MON2Q7Z3U7 1717 aa2.17□□□□□ -2.06
SGIP1-209ENST00000480548 FAM223BA6NKX1 122 aa2.16□□□□□ -2.06
SGIP1-209ENST00000480548 ZNF815PA8K554 130 aa2.16□□□□□ -2.06
SGIP1-209ENST00000480548 RPL37P61927 97 aaKnown RBP2.16□□□□□ -2.06
SGIP1-209ENST00000480548 PSMG4Q5JS54 123 aa2.16□□□□□ -2.06
SGIP1-209ENST00000480548 CFAP126Q5VTH2 177 aa2.16□□□□□ -2.06
SGIP1-209ENST00000480548 SMIM11BQ8TCY0 68 aa2.16□□□□□ -2.06
SGIP1-209ENST00000480548 RABAC1Q9UI14 185 aa2.16□□□□□ -2.06
SGIP1-209ENST00000480548 CEP162Q5TB80 1403 aa2.16□□□□□ -2.06
SGIP1-209ENST00000480548 EDC4Q6P2E9 1401 aaKnown RBP2.16□□□□□ -2.06
SGIP1-209ENST00000480548 ARHGEF5Q12774 1597 aa2.15□□□□□ -2.06
SGIP1-209ENST00000480548 M0R3E3 92 aa2.15□□□□□ -2.07
SGIP1-209ENST00000480548 COX17Q14061 63 aa2.15□□□□□ -2.07
SGIP1-209ENST00000480548 S100A13Q99584 98 aa2.15□□□□□ -2.07
SGIP1-209ENST00000480548 ATP10BO94823 1461 aa2.14□□□□□ -2.07
SGIP1-209ENST00000480548 GVQW2A0A096LPI5 108 aaPredicted RBP2.14□□□□□ -2.07
SGIP1-209ENST00000480548 MGPP08493 103 aa2.14□□□□□ -2.07
SGIP1-209ENST00000480548 UNC13BO14795 1591 aa2.14□□□□□ -2.07
SGIP1-209ENST00000480548 ZDBF2Q9HCK1 2354 aa2.14□□□□□ -2.07
SGIP1-209ENST00000480548 RP1L1Q8IWN7 2480 aaPredicted RBP2.13□□□□□ -2.07
SGIP1-209ENST00000480548 A0A1B0GWA3 101 aa2.13□□□□□ -2.07
SGIP1-209ENST00000480548 SMIM11AP58511 58 aa2.13□□□□□ -2.07
SGIP1-209ENST00000480548 Q6ZRX8 168 aa2.13□□□□□ -2.07
SGIP1-209ENST00000480548 NRXN1Q9ULB1 1477 aa2.13□□□□□ -2.07
SGIP1-209ENST00000480548 EPRSP07814 1512 aaKnown RBP2.12□□□□□ -2.07
SGIP1-209ENST00000480548 BCE1O60756 84 aa2.12□□□□□ -2.07
SGIP1-209ENST00000480548 ZNF720Q7Z2F6 126 aa2.12□□□□□ -2.07
SGIP1-209ENST00000480548 FANCAO15360 1455 aa2.12□□□□□ -2.07
SGIP1-209ENST00000480548 GCHFRP30047 84 aa2.11□□□□□ -2.07
SGIP1-209ENST00000480548 SPINT3P49223 89 aa2.11□□□□□ -2.07
SGIP1-209ENST00000480548 PRR15LQ9BU68 103 aa2.11□□□□□ -2.07
SGIP1-209ENST00000480548 F5P12259 2224 aa2.11□□□□□ -2.07
SGIP1-209ENST00000480548 IFT172Q9UG01 1749 aa2.11□□□□□ -2.07
SGIP1-209ENST00000480548 CLTCQ00610 1675 aaKnown RBP2.1□□□□□ -2.07
SGIP1-209ENST00000480548 CNTRLQ7Z7A1 2325 aa2.1□□□□□ -2.07
SGIP1-209ENST00000480548 C7orf77A4D0Y5 90 aa2.1□□□□□ -2.07
SGIP1-209ENST00000480548 K7EIL1 84 aa2.1□□□□□ -2.07
SGIP1-209ENST00000480548 FXYD6P3P58550 94 aa2.1□□□□□ -2.07
SGIP1-209ENST00000480548 ETDBQ3ZM63 59 aa2.1□□□□□ -2.07
SGIP1-209ENST00000480548 CDK13Q14004 1512 aaKnown RBP2.1□□□□□ -2.07
SGIP1-209ENST00000480548 MAGI2Q86UL8 1455 aa2.09□□□□□ -2.07
SGIP1-209ENST00000480548 RGPD4Q7Z3J3 1758 aa2.09□□□□□ -2.07
SGIP1-209ENST00000480548 KRTAP21-3Q3LHN1 58 aa2.09□□□□□ -2.07
SGIP1-209ENST00000480548 SPCS1Q9Y6A9 102 aa2.09□□□□□ -2.07
SGIP1-209ENST00000480548 KNTC1P50748 2209 aa2.09□□□□□ -2.08
SGIP1-209ENST00000480548 MAP2P11137 1827 aaKnown RBP2.08□□□□□ -2.08
SGIP1-209ENST00000480548 LINC00472Q9H8W2 130 aa2.08□□□□□ -2.08
SGIP1-209ENST00000480548 KIF21AQ7Z4S6 1674 aa2.08□□□□□ -2.08
SGIP1-209ENST00000480548 ZNF236Q9UL36 1845 aa2.07□□□□□ -2.08
SGIP1-209ENST00000480548 F8WEM9 126 aa2.07□□□□□ -2.08
SGIP1-209ENST00000480548 ADIRFQ15847 76 aa2.07□□□□□ -2.08
SGIP1-209ENST00000480548 G3V318 75 aa2.06□□□□□ -2.08
SGIP1-209ENST00000480548 SNRPFP62306 86 aaKnown RBP2.06□□□□□ -2.08
SGIP1-209ENST00000480548 ALKAL2Q6UX46 152 aa2.06□□□□□ -2.08
SGIP1-209ENST00000480548 SPRR4Q96PI1 79 aa2.06□□□□□ -2.08
SGIP1-209ENST00000480548 PSENENQ9NZ42 101 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms