RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 MRPL52Q86TS9 123 aaKnown RBP8.15□□□□□ -1.1
TRA2B-212ENST00000480461 UBE2WQ96B02 151 aa8.15□□□□□ -1.1
TRA2B-212ENST00000480461 OPRPNQ99935 248 aaPredicted RBP8.15□□□□□ -1.1
TRA2B-212ENST00000480461 UBE2D4Q9Y2X8 147 aa8.15□□□□□ -1.1
TRA2B-212ENST00000480461 UBE2L6O14933 153 aa8.14□□□□□ -1.11
TRA2B-212ENST00000480461 BTF3P20290 206 aaKnown RBP8.14□□□□□ -1.11
TRA2B-212ENST00000480461 LAGE3Q14657 143 aa8.14□□□□□ -1.11
TRA2B-212ENST00000480461 RNASEKQ6P5S7 137 aaKnown RBP8.14□□□□□ -1.11
TRA2B-212ENST00000480461 KRTAP26-1Q6PEX3 210 aa8.14□□□□□ -1.11
TRA2B-212ENST00000480461 CLPSL2Q6UWE3 100 aa8.14□□□□□ -1.11
TRA2B-212ENST00000480461 PRSS3P2Q8NHM4 247 aa8.14□□□□□ -1.11
TRA2B-212ENST00000480461 NXT2Q9NPJ8 142 aaKnown RBP8.14□□□□□ -1.11
TRA2B-212ENST00000480461 CDC42SE2Q9NRR3 84 aa8.14□□□□□ -1.11
TRA2B-212ENST00000480461 PKIAP61925 76 aa8.13□□□□□ -1.11
TRA2B-212ENST00000480461 Q8N1X5 172 aa8.13□□□□□ -1.11
TRA2B-212ENST00000480461 DMBT1Q9UGM3 2413 aaPredicted RBP8.12□□□□□ -1.11
TRA2B-212ENST00000480461 TRAV8-3A0A0A6YYJ7 113 aa8.12□□□□□ -1.11
TRA2B-212ENST00000480461 REG3AQ06141 175 aa8.12□□□□□ -1.11
TRA2B-212ENST00000480461 AMMECR1LQ6DCA0 310 aa8.12□□□□□ -1.11
TRA2B-212ENST00000480461 ZNF664Q8N3J9 261 aa8.12□□□□□ -1.11
TRA2B-212ENST00000480461 TIMM21Q9BVV7 248 aa8.12□□□□□ -1.11
TRA2B-212ENST00000480461 CSDC2Q9Y534 153 aaKnown RBP8.12□□□□□ -1.11
TRA2B-212ENST00000480461 ZNF25P17030 456 aaPredicted RBP8.11□□□□□ -1.11
TRA2B-212ENST00000480461 RNASE13Q5GAN3 156 aaKnown RBP8.11□□□□□ -1.11
TRA2B-212ENST00000480461 NFE4Q86UQ8 179 aa8.11□□□□□ -1.11
TRA2B-212ENST00000480461 IGLV10-54A0A075B6I4 117 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 A0A096LNJ9 63 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 LRCOL1A6NCL2 159 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 IGIPA6NJ69 53 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 C16orf90A8MZG2 172 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 K7EMI3 77 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 LINC00614P0C842 121 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 Q0VG73 95 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 WFDC2Q14508 124 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 ORMDL2Q53FV1 153 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 C2orf66Q6UXQ4 117 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 Q6ZUT4 128 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 OR5A1Q8NGJ0 315 aa8.1□□□□□ -1.11
TRA2B-212ENST00000480461 IGKV2D-24A0A075B6R9 120 aa8.09□□□□□ -1.11
TRA2B-212ENST00000480461 IGKV3OR2-268A0A0C4DH90 116 aa8.09□□□□□ -1.11
TRA2B-212ENST00000480461 LINC00310P59036 64 aa8.09□□□□□ -1.11
TRA2B-212ENST00000480461 MIAQ16674 131 aa8.09□□□□□ -1.11
TRA2B-212ENST00000480461 ZC2HC1BQ5TFG8 222 aa8.09□□□□□ -1.11
TRA2B-212ENST00000480461 TMEM101Q96IK0 257 aa8.09□□□□□ -1.11
TRA2B-212ENST00000480461 PYGO1Q9Y3Y4 419 aa8.09□□□□□ -1.11
TRA2B-212ENST00000480461 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.11
TRA2B-212ENST00000480461 IGLV4-3A0A075B6K6 122 aa8.08□□□□□ -1.12
TRA2B-212ENST00000480461 LINC00959A0A1B0GUT2 108 aa8.08□□□□□ -1.12
TRA2B-212ENST00000480461 NUPR1O60356 82 aa8.08□□□□□ -1.12
TRA2B-212ENST00000480461 PMCHL1Q16048 86 aa8.08□□□□□ -1.12
TRA2B-212ENST00000480461 DGAT2L7PQ6IED9 249 aa8.08□□□□□ -1.12
TRA2B-212ENST00000480461 FA2HQ7L5A8 372 aa8.08□□□□□ -1.12
TRA2B-212ENST00000480461 TMEM18Q96B42 140 aa8.08□□□□□ -1.12
TRA2B-212ENST00000480461 TOMM6Q96B49 74 aa8.08□□□□□ -1.12
TRA2B-212ENST00000480461 SPANXA1Q9NS26 97 aa8.08□□□□□ -1.12
TRA2B-212ENST00000480461 CYSLTR1Q9Y271 337 aa8.08□□□□□ -1.12
TRA2B-212ENST00000480461 A0A087WTM6 91 aa8.07□□□□□ -1.12
TRA2B-212ENST00000480461 CRPP02741 224 aa8.07□□□□□ -1.12
TRA2B-212ENST00000480461 MRPS36P82909 103 aaKnown RBP8.07□□□□□ -1.12
TRA2B-212ENST00000480461 BAALCQ8WXS3 180 aa8.07□□□□□ -1.12
TRA2B-212ENST00000480461 TM2D2Q9BX73 214 aa8.07□□□□□ -1.12
TRA2B-212ENST00000480461 AP5S1Q9NUS5 200 aa8.07□□□□□ -1.12
TRA2B-212ENST00000480461 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
TRA2B-212ENST00000480461 LECT2O14960 151 aa8.06□□□□□ -1.12
TRA2B-212ENST00000480461 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.12
TRA2B-212ENST00000480461 LINC00173Q6ZV60 143 aa8.06□□□□□ -1.12
TRA2B-212ENST00000480461 C1orf43Q9BWL3 253 aa8.06□□□□□ -1.12
TRA2B-212ENST00000480461 HIST1H2BKO60814 126 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 HIST1H2BJP06899 126 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 HIST1H2BOP23527 126 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 HIST1H2BBP33778 126 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 HIST1H2BDP58876 126 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 KRTAP10-2P60368 255 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 HIST1H2BCP62807 126 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 HIST2H2BEQ16778 126 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.05□□□□□ -1.12
TRA2B-212ENST00000480461 CHCHD10Q8WYQ3 142 aaPredicted RBP8.05□□□□□ -1.12
TRA2B-212ENST00000480461 HIST1H2BHQ93079 126 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 HIST1H2BNQ99877 126 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 HIST1H2BMQ99879 126 aa8.05□□□□□ -1.12
TRA2B-212ENST00000480461 TRAV13-1A0A0B4J241 112 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 GAGE12HA6NDE8 117 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 CCL25O15444 150 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 PSCAO43653 123 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 FOXI1Q12951 378 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 PDZD11Q5EBL8 140 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 ERASQ7Z444 233 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 FAM19A2Q8N3H0 131 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 RMI2Q96E14 147 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 SCGB3A1Q96QR1 104 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 AMELXQ99217 191 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 COX11Q9Y6N1 276 aa8.04□□□□□ -1.12
TRA2B-212ENST00000480461 SERF1AO75920 110 aa8.03□□□□□ -1.12
TRA2B-212ENST00000480461 XCL1P47992 114 aa8.03□□□□□ -1.12
TRA2B-212ENST00000480461 RAB5BP61020 215 aa8.03□□□□□ -1.12
TRA2B-212ENST00000480461 SMAGPQ0VAQ4 97 aa8.03□□□□□ -1.12
TRA2B-212ENST00000480461 BAGE3Q86Y29 109 aa8.03□□□□□ -1.12
TRA2B-212ENST00000480461 CHCHD1Q96BP2 118 aaKnown RBP8.03□□□□□ -1.12
TRA2B-212ENST00000480461 TMEM141Q96I45 108 aa8.03□□□□□ -1.12
TRA2B-212ENST00000480461 TIMM17AQ99595 171 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms