RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 OVOL2Q9BRP0 275 aa13.63□□□□□ -0.23
SYF2-204ENST00000476231 KIR2DL5BQ8NHK3 375 aa13.62□□□□□ -0.23
SYF2-204ENST00000476231 UBE2D4Q9Y2X8 147 aa13.62□□□□□ -0.23
SYF2-204ENST00000476231 TRAV4A0A0B4J268 109 aa13.62□□□□□ -0.23
SYF2-204ENST00000476231 COTL1Q14019 142 aa13.62□□□□□ -0.23
SYF2-204ENST00000476231 TIMM21Q9BVV7 248 aa13.62□□□□□ -0.23
SYF2-204ENST00000476231 TINCRA0A1B0GVN0 87 aa13.61□□□□□ -0.23
SYF2-204ENST00000476231 G3V4G9 280 aa13.6□□□□□ -0.23
SYF2-204ENST00000476231 APOC4P55056 127 aa13.6□□□□□ -0.23
SYF2-204ENST00000476231 TRBV10-1A0A0K0K1A3 114 aa13.6□□□□□ -0.23
SYF2-204ENST00000476231 RNF151Q2KHN1 245 aa13.6□□□□□ -0.23
SYF2-204ENST00000476231 SMIM9A6NGZ8 99 aa13.59□□□□□ -0.23
SYF2-204ENST00000476231 PGPEP1Q9NXJ5 209 aa13.59□□□□□ -0.23
SYF2-204ENST00000476231 CIDEAO60543 219 aa13.58□□□□□ -0.24
SYF2-204ENST00000476231 LYRM7Q5U5X0 104 aa13.58□□□□□ -0.24
SYF2-204ENST00000476231 Q9UF83 564 aa13.58□□□□□ -0.24
SYF2-204ENST00000476231 VPS25Q9BRG1 176 aa13.57□□□□□ -0.24
SYF2-204ENST00000476231 IGHV1-58A0A0C4DH39 117 aa13.56□□□□□ -0.24
SYF2-204ENST00000476231 TMEM238C9JI98 176 aa13.56□□□□□ -0.24
SYF2-204ENST00000476231 GAGE7O76087 117 aa13.56□□□□□ -0.24
SYF2-204ENST00000476231 GAGE12FP0CL80 117 aa13.56□□□□□ -0.24
SYF2-204ENST00000476231 GAGE12GP0CL81 117 aa13.56□□□□□ -0.24
SYF2-204ENST00000476231 GAGE12IP0CL82 117 aa13.56□□□□□ -0.24
SYF2-204ENST00000476231 X6R8D5 127 aa13.56□□□□□ -0.24
SYF2-204ENST00000476231 TRGV2A0A075B6R0 118 aa13.56□□□□□ -0.24
SYF2-204ENST00000476231 IGHV3-30-3P0DP02 117 aa13.56□□□□□ -0.24
SYF2-204ENST00000476231 FBN1P35555 2871 aaKnown RBP13.55□□□□□ -0.24
SYF2-204ENST00000476231 TSPAN13O95857 204 aa13.55□□□□□ -0.24
SYF2-204ENST00000476231 TIRAPP58753 221 aa13.55□□□□□ -0.24
SYF2-204ENST00000476231 UBE2D3P61077 147 aa13.55□□□□□ -0.24
SYF2-204ENST00000476231 UBE2D2P62837 147 aa13.55□□□□□ -0.24
SYF2-204ENST00000476231 CFC1BP0CG36 223 aa13.54□□□□□ -0.24
SYF2-204ENST00000476231 CFC1P0CG37 223 aa13.54□□□□□ -0.24
SYF2-204ENST00000476231 GAGE13Q4V321 117 aa13.54□□□□□ -0.24
SYF2-204ENST00000476231 H3BMG7 143 aa13.54□□□□□ -0.24
SYF2-204ENST00000476231 K7EQD1 137 aa13.54□□□□□ -0.24
SYF2-204ENST00000476231 RPL24P83731 157 aaKnown RBP13.54□□□□□ -0.24
SYF2-204ENST00000476231 RPL36AP83881 106 aaKnown RBP13.53□□□□□ -0.24
SYF2-204ENST00000476231 OXLD1Q5BKU9 147 aa13.53□□□□□ -0.24
SYF2-204ENST00000476231 CEMP1Q6PRD7 247 aaPredicted RBP13.53□□□□□ -0.24
SYF2-204ENST00000476231 DAZ4Q86SG3 579 aaKnown RBP13.53□□□□□ -0.24
SYF2-204ENST00000476231 C10orf126Q8N4M7 172 aa13.53□□□□□ -0.24
SYF2-204ENST00000476231 RPL36ALQ969Q0 106 aaKnown RBP13.53□□□□□ -0.24
SYF2-204ENST00000476231 DAZ3Q9NR90 486 aaKnown RBP13.53□□□□□ -0.24
SYF2-204ENST00000476231 CSDC2Q9Y534 153 aaKnown RBP13.53□□□□□ -0.24
SYF2-204ENST00000476231 NOTCH3Q9UM47 2321 aa13.53□□□□□ -0.24
SYF2-204ENST00000476231 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.52□□□□□ -0.24
SYF2-204ENST00000476231 IGLV5-45A0A087WSX0 123 aa13.52□□□□□ -0.24
SYF2-204ENST00000476231 A0A0J9YXY3 114 aa13.52□□□□□ -0.24
SYF2-204ENST00000476231 IGKV2-29A2NJV5 120 aaPredicted RBP13.52□□□□□ -0.24
SYF2-204ENST00000476231 APOMO95445 188 aa13.52□□□□□ -0.24
SYF2-204ENST00000476231 SMAGPQ0VAQ4 97 aa13.52□□□□□ -0.24
SYF2-204ENST00000476231 PRO1854Q9UHT4 67 aa13.52□□□□□ -0.24
SYF2-204ENST00000476231 PRO0461Q9UI25 63 aa13.52□□□□□ -0.24
SYF2-204ENST00000476231 TRRAPQ9Y4A5 3859 aa13.52□□□□□ -0.25
SYF2-204ENST00000476231 IGHV4-30-4P0DP06 118 aa13.52□□□□□ -0.25
SYF2-204ENST00000476231 FAM19A3Q7Z5A8 133 aa13.52□□□□□ -0.25
SYF2-204ENST00000476231 VSIG2Q96IQ7 327 aa13.52□□□□□ -0.25
SYF2-204ENST00000476231 A0A0B4J2C4 111 aa13.51□□□□□ -0.25
SYF2-204ENST00000476231 DEFB135Q30KP9 77 aa13.51□□□□□ -0.25
SYF2-204ENST00000476231 Q6ZUT4 128 aa13.51□□□□□ -0.25
SYF2-204ENST00000476231 LINC00612Q8N6U2 182 aa13.51□□□□□ -0.25
SYF2-204ENST00000476231 TRBV20-1A0A075B6N2 111 aa13.51□□□□□ -0.25
SYF2-204ENST00000476231 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.51□□□□□ -0.25
SYF2-204ENST00000476231 PCP4P48539 62 aa13.51□□□□□ -0.25
SYF2-204ENST00000476231 EGFEM1PQ0D2K5 195 aa13.51□□□□□ -0.25
SYF2-204ENST00000476231 IGHV3-38A0A0C4DH36 116 aa13.5□□□□□ -0.25
SYF2-204ENST00000476231 WFDC2Q14508 124 aa13.5□□□□□ -0.25
SYF2-204ENST00000476231 TRBV6-4A0A1B0GX49 114 aa13.49□□□□□ -0.25
SYF2-204ENST00000476231 GEMIN7Q9H840 131 aaKnown RBP13.49□□□□□ -0.25
SYF2-204ENST00000476231 IGHV3-64A0A075B6Q5 118 aa13.49□□□□□ -0.25
SYF2-204ENST00000476231 DGAT2L7PQ6IED9 249 aa13.49□□□□□ -0.25
SYF2-204ENST00000476231 SPANXDQ9BXN6 97 aa13.49□□□□□ -0.25
SYF2-204ENST00000476231 SPANXCQ9NY87 97 aa13.49□□□□□ -0.25
SYF2-204ENST00000476231 TEX48A0A1B0GUV7 120 aa13.48□□□□□ -0.25
SYF2-204ENST00000476231 A4D1N5 150 aa13.48□□□□□ -0.25
SYF2-204ENST00000476231 J3QR89 54 aa13.48□□□□□ -0.25
SYF2-204ENST00000476231 KRTAP10-11P60412 298 aa13.48□□□□□ -0.25
SYF2-204ENST00000476231 RNF183Q96D59 192 aa13.48□□□□□ -0.25
SYF2-204ENST00000476231 TRGV4A0A0C4DH28 118 aa13.47□□□□□ -0.25
SYF2-204ENST00000476231 TIMM17BO60830 172 aa13.47□□□□□ -0.25
SYF2-204ENST00000476231 ZFAND6Q6FIF0 208 aa13.47□□□□□ -0.25
SYF2-204ENST00000476231 MUSTN1Q8IVN3 82 aa13.47□□□□□ -0.25
SYF2-204ENST00000476231 LITAFQ99732 161 aa13.47□□□□□ -0.25
SYF2-204ENST00000476231 GTSF1LQ9H1H1 148 aa13.47□□□□□ -0.25
SYF2-204ENST00000476231 NDUFA12Q9UI09 145 aa13.47□□□□□ -0.25
SYF2-204ENST00000476231 LYRM9A8MSI8 78 aa13.47□□□□□ -0.25
SYF2-204ENST00000476231 RNASE13Q5GAN3 156 aaKnown RBP13.47□□□□□ -0.25
SYF2-204ENST00000476231 HERVK_113P63121 156 aa13.46□□□□□ -0.25
SYF2-204ENST00000476231 FHL2Q14192 279 aa13.46□□□□□ -0.25
SYF2-204ENST00000476231 SBSPONQ8IVN8 264 aa13.46□□□□□ -0.25
SYF2-204ENST00000476231 TRAV8-3A0A0A6YYJ7 113 aa13.45□□□□□ -0.26
SYF2-204ENST00000476231 LOC107984156A0A0G2JMH3 177 aa13.45□□□□□ -0.26
SYF2-204ENST00000476231 DEFB130BP0DP73 79 aa13.45□□□□□ -0.26
SYF2-204ENST00000476231 DEFB130AP0DP74 79 aa13.45□□□□□ -0.26
SYF2-204ENST00000476231 MIFP14174 115 aa13.45□□□□□ -0.26
SYF2-204ENST00000476231 ARL17AQ8IVW1 177 aa13.45□□□□□ -0.26
SYF2-204ENST00000476231 A8MZ25 164 aa13.45□□□□□ -0.26
SYF2-204ENST00000476231 IGHV3-33P01772 117 aa13.45□□□□□ -0.26
SYF2-204ENST00000476231 ATP6V0E2Q8NHE4 81 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms