RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 SEC11AP67812 179 aa12.91□□□□□ -0.34
SEC61A2-213ENST00000475268 MRPS36P82909 103 aaKnown RBP12.91□□□□□ -0.34
SEC61A2-213ENST00000475268 GTSF1LQ9H1H1 148 aa12.91□□□□□ -0.34
SEC61A2-213ENST00000475268 TMEM223A0PJW6 202 aa12.9□□□□□ -0.34
SEC61A2-213ENST00000475268 GCSHP23434 173 aa12.9□□□□□ -0.34
SEC61A2-213ENST00000475268 IGHV3-64A0A075B6Q5 118 aa12.89□□□□□ -0.35
SEC61A2-213ENST00000475268 SBSPONQ8IVN8 264 aa12.89□□□□□ -0.35
SEC61A2-213ENST00000475268 RNF183Q96D59 192 aa12.89□□□□□ -0.35
SEC61A2-213ENST00000475268 TMEM243Q9BU79 118 aa12.89□□□□□ -0.35
SEC61A2-213ENST00000475268 UBE2L6O14933 153 aa12.88□□□□□ -0.35
SEC61A2-213ENST00000475268 TSPEAR-AS2P59090 65 aa12.88□□□□□ -0.35
SEC61A2-213ENST00000475268 COX11Q9Y6N1 276 aa12.88□□□□□ -0.35
SEC61A2-213ENST00000475268 MAST4O15021 2626 aa12.88□□□□□ -0.35
SEC61A2-213ENST00000475268 TAX1BP3O14907 124 aa12.88□□□□□ -0.35
SEC61A2-213ENST00000475268 MIFP14174 115 aa12.88□□□□□ -0.35
SEC61A2-213ENST00000475268 Q8NAQ8 132 aa12.88□□□□□ -0.35
SEC61A2-213ENST00000475268 SCGB1D4Q6XE38 83 aa12.87□□□□□ -0.35
SEC61A2-213ENST00000475268 TINCRA0A1B0GVN0 87 aa12.87□□□□□ -0.35
SEC61A2-213ENST00000475268 A6NDN8 102 aa12.87□□□□□ -0.35
SEC61A2-213ENST00000475268 J3QQQ9 107 aa12.87□□□□□ -0.35
SEC61A2-213ENST00000475268 GYPEP15421 78 aa12.87□□□□□ -0.35
SEC61A2-213ENST00000475268 AMMECR1LQ6DCA0 310 aa12.87□□□□□ -0.35
SEC61A2-213ENST00000475268 PLEKHB2Q96CS7 222 aa12.87□□□□□ -0.35
SEC61A2-213ENST00000475268 UBE2D1P51668 147 aa12.86□□□□□ -0.35
SEC61A2-213ENST00000475268 HIST1H4GQ99525 98 aa12.86□□□□□ -0.35
SEC61A2-213ENST00000475268 CSDC2Q9Y534 153 aaKnown RBP12.86□□□□□ -0.35
SEC61A2-213ENST00000475268 LEPROTO15243 131 aa12.86□□□□□ -0.35
SEC61A2-213ENST00000475268 LGALS3P17931 250 aaKnown RBP12.86□□□□□ -0.35
SEC61A2-213ENST00000475268 FXYD2P54710 66 aa12.86□□□□□ -0.35
SEC61A2-213ENST00000475268 EGFEM1PQ0D2K5 195 aa12.86□□□□□ -0.35
SEC61A2-213ENST00000475268 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
SEC61A2-213ENST00000475268 PRO0255Q9UI72 69 aa12.86□□□□□ -0.35
SEC61A2-213ENST00000475268 K7EP13 123 aa12.85□□□□□ -0.35
SEC61A2-213ENST00000475268 DAD1P61803 113 aa12.85□□□□□ -0.35
SEC61A2-213ENST00000475268 SMAGPQ0VAQ4 97 aa12.85□□□□□ -0.35
SEC61A2-213ENST00000475268 CEND1Q8N111 149 aa12.85□□□□□ -0.35
SEC61A2-213ENST00000475268 GEMIN7Q9H840 131 aaKnown RBP12.85□□□□□ -0.35
SEC61A2-213ENST00000475268 CELA1Q9UNI1 258 aa12.85□□□□□ -0.35
SEC61A2-213ENST00000475268 PKD1L1Q8TDX9 2849 aa12.85□□□□□ -0.35
SEC61A2-213ENST00000475268 TRBV6-8A0A0A6YYG3 113 aa12.84□□□□□ -0.35
SEC61A2-213ENST00000475268 PTTG1IPP53801 180 aa12.84□□□□□ -0.35
SEC61A2-213ENST00000475268 LINC00469Q8N7U9 141 aa12.84□□□□□ -0.35
SEC61A2-213ENST00000475268 TMEM101Q96IK0 257 aa12.84□□□□□ -0.35
SEC61A2-213ENST00000475268 TAL2Q16559 108 aa12.83□□□□□ -0.36
SEC61A2-213ENST00000475268 TM2D2Q9BX73 214 aa12.83□□□□□ -0.36
SEC61A2-213ENST00000475268 CDC42SE2Q9NRR3 84 aa12.83□□□□□ -0.36
SEC61A2-213ENST00000475268 GAGE6Q13070 117 aa12.83□□□□□ -0.36
SEC61A2-213ENST00000475268 ATP6V0E2Q8NHE4 81 aa12.83□□□□□ -0.36
SEC61A2-213ENST00000475268 TRAV8-3A0A0A6YYJ7 113 aa12.82□□□□□ -0.36
SEC61A2-213ENST00000475268 PAX4O43316 350 aa12.82□□□□□ -0.36
SEC61A2-213ENST00000475268 TRAV13-1A0A0B4J241 112 aa12.81□□□□□ -0.36
SEC61A2-213ENST00000475268 H7C423 109 aa12.81□□□□□ -0.36
SEC61A2-213ENST00000475268 SPART-AS1P0CW21 52 aa12.81□□□□□ -0.36
SEC61A2-213ENST00000475268 CHCHD5Q9BSY4 110 aa12.81□□□□□ -0.36
SEC61A2-213ENST00000475268 A0A0J9YY99 117 aa12.81□□□□□ -0.36
SEC61A2-213ENST00000475268 G3V4G9 280 aa12.81□□□□□ -0.36
SEC61A2-213ENST00000475268 IGHV3-30-3P0DP02 117 aa12.81□□□□□ -0.36
SEC61A2-213ENST00000475268 COL6A5A8TX70 2615 aa12.8□□□□□ -0.36
SEC61A2-213ENST00000475268 SPINK8P0C7L1 97 aa12.8□□□□□ -0.36
SEC61A2-213ENST00000475268 TIRAPP58753 221 aa12.8□□□□□ -0.36
SEC61A2-213ENST00000475268 RAB37Q96AX2 223 aa12.8□□□□□ -0.36
SEC61A2-213ENST00000475268 CDKN2A-AS1Q9UH64 79 aa12.8□□□□□ -0.36
SEC61A2-213ENST00000475268 A0A096LPF7 62 aa12.8□□□□□ -0.36
SEC61A2-213ENST00000475268 COX6A2Q02221 97 aa12.8□□□□□ -0.36
SEC61A2-213ENST00000475268 LINC00242Q5T6M2 205 aa12.8□□□□□ -0.36
SEC61A2-213ENST00000475268 IGHV1-58A0A0C4DH39 117 aa12.79□□□□□ -0.36
SEC61A2-213ENST00000475268 H3BRM9 83 aa12.79□□□□□ -0.36
SEC61A2-213ENST00000475268 ATP5G1P05496 136 aa12.79□□□□□ -0.36
SEC61A2-213ENST00000475268 SRSF9Q13242 221 aaKnown RBP eCLIP12.79□□□□□ -0.36
SEC61A2-213ENST00000475268 RETNQ9HD89 108 aa12.79□□□□□ -0.36
SEC61A2-213ENST00000475268 NHP2Q9NX24 153 aaKnown RBP12.79□□□□□ -0.36
SEC61A2-213ENST00000475268 A8MZ25 164 aa12.78□□□□□ -0.36
SEC61A2-213ENST00000475268 SMIM13P0DJ93 91 aa12.78□□□□□ -0.36
SEC61A2-213ENST00000475268 HERVK_113P63121 156 aa12.78□□□□□ -0.36
SEC61A2-213ENST00000475268 VSIG2Q96IQ7 327 aa12.78□□□□□ -0.36
SEC61A2-213ENST00000475268 CMYA5Q8N3K9 4069 aa12.78□□□□□ -0.36
SEC61A2-213ENST00000475268 IGLV5-45A0A087WSX0 123 aa12.77□□□□□ -0.36
SEC61A2-213ENST00000475268 F5H768 121 aa12.77□□□□□ -0.36
SEC61A2-213ENST00000475268 K7ERJ3 54 aa12.77□□□□□ -0.37
SEC61A2-213ENST00000475268 HTN3P15516 51 aa12.77□□□□□ -0.37
SEC61A2-213ENST00000475268 VAMP3Q15836 100 aa12.77□□□□□ -0.37
SEC61A2-213ENST00000475268 FAM19A3Q7Z5A8 133 aa12.76□□□□□ -0.37
SEC61A2-213ENST00000475268 IGLV4-60A0A075B6I1 120 aa12.76□□□□□ -0.37
SEC61A2-213ENST00000475268 TRAV26-1A0A087WT03 109 aa12.76□□□□□ -0.37
SEC61A2-213ENST00000475268 NAA38Q9BRA0 125 aaKnown RBP12.75□□□□□ -0.37
SEC61A2-213ENST00000475268 C9orf118A6NHY6 69 aa12.74□□□□□ -0.37
SEC61A2-213ENST00000475268 IGKV3OR2-268A0A0C4DH90 116 aa12.74□□□□□ -0.37
SEC61A2-213ENST00000475268 C10orf126Q8N4M7 172 aa12.74□□□□□ -0.37
SEC61A2-213ENST00000475268 TMEM262E9PQX1 116 aa12.73□□□□□ -0.37
SEC61A2-213ENST00000475268 H3BUT2 72 aa12.73□□□□□ -0.37
SEC61A2-213ENST00000475268 SPANXB1Q9NS25 103 aaPredicted RBP12.73□□□□□ -0.37
SEC61A2-213ENST00000475268 NDUFA12Q9UI09 145 aa12.73□□□□□ -0.37
SEC61A2-213ENST00000475268 A0A0J9YXY3 114 aa12.71□□□□□ -0.37
SEC61A2-213ENST00000475268 C12orf74Q32Q52 190 aa12.71□□□□□ -0.37
SEC61A2-213ENST00000475268 ANK2Q01484 3957 aa12.71□□□□□ -0.37
SEC61A2-213ENST00000475268 UBE2V1Q13404 147 aa12.71□□□□□ -0.37
SEC61A2-213ENST00000475268 TEX48A0A1B0GUV7 120 aa12.7□□□□□ -0.38
SEC61A2-213ENST00000475268 SAMD5Q5TGI4 173 aa12.7□□□□□ -0.38
SEC61A2-213ENST00000475268 IGHV3-30P01768 117 aa12.7□□□□□ -0.38
SEC61A2-213ENST00000475268 IGHV3-30-5P0DP03 117 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms