RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 UBE2D3P61077 147 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 UBE2D2P62837 147 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 MEF2BQ02080 365 aaPredicted RBP3.88□□□□□ -1.79
CPSF7-210ENST00000474684 MPV17L2Q567V2 206 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 PDZD11Q5EBL8 140 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 PIK3CD-AS1Q5SR53 167 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 WDR73Q6P4I2 378 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 SCXQ7RTU7 201 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 SYT8Q8NBV8 401 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 NEXN-AS1Q8NBZ9 246 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 SMIM7Q9BQ49 75 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 ALKBH7Q9BT30 221 aaPredicted RBP3.88□□□□□ -1.79
CPSF7-210ENST00000474684 DERL1Q9BUN8 251 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 KLK12Q9UKR0 248 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 PHLDA3Q9Y5J5 127 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 URGCP-MRPS24S4R325 110 aa3.88□□□□□ -1.79
CPSF7-210ENST00000474684 IGKV2D-24A0A075B6R9 120 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 SNAI2O43623 268 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 HNRNPA3P51991 378 aaKnown RBP3.87□□□□□ -1.79
CPSF7-210ENST00000474684 KRTAP10-4P60372 401 aaPredicted RBP3.87□□□□□ -1.79
CPSF7-210ENST00000474684 Q0VG73 95 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 ZNF56Q15929 161 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 PRR27Q6MZM9 219 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 MRPL54Q6P161 138 aaKnown RBP3.87□□□□□ -1.79
CPSF7-210ENST00000474684 CLPSL2Q6UWE3 100 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 UBE2WQ96B02 151 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 VPS25Q9BRG1 176 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 MLST8Q9BVC4 326 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 LAMTOR2Q9Y2Q5 125 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 COX11Q9Y6N1 276 aa3.87□□□□□ -1.79
CPSF7-210ENST00000474684 TRAV8-3A0A0A6YYJ7 113 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 IGLV2-8P01709 118 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 SMIM17P0DL12 118 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 CCL20P78556 96 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 RASL11AQ6T310 242 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 ENHOQ6UWT2 76 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 NTM-AS1Q6ZSK4 140 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 OR10G8Q8NGN5 311 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 TM2D2Q9BX73 214 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 GNG13Q9P2W3 67 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 TRAPPC1Q9Y5R8 145 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 KIF25-AS1Q9Y6Z4 181 aa3.86□□□□□ -1.79
CPSF7-210ENST00000474684 TNXBP22105 4242 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 TRBV20OR9-2A0A075B6H5 130 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 TRBV7-3A0A075B6L6 115 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 TRBV6-8A0A0A6YYG3 113 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 TRBV10-1A0A0K0K1A3 114 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 A0A1B0GV72 72 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 J3QR89 54 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 RPL36AP83881 106 aaKnown RBP3.85□□□□□ -1.79
CPSF7-210ENST00000474684 ADIRFQ15847 76 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 CENPWQ5EE01 88 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 GTF2H5Q6ZYL4 71 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 Q8N976 141 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 RPL36ALQ969Q0 106 aaKnown RBP3.85□□□□□ -1.79
CPSF7-210ENST00000474684 C11orf52Q96A22 123 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 NUDT11Q96G61 164 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 SPANXA1Q9NS26 97 aa3.85□□□□□ -1.79
CPSF7-210ENST00000474684 A0A087WX48 190 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 TMEM238C9JI98 176 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 HLA-DQA1P01909 254 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 OR5AL1P0C617 328 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 IGLC6P0CF74 106 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 RPL23P62829 140 aaKnown RBP3.84□□□□□ -1.79
CPSF7-210ENST00000474684 OCIAD2Q56VL3 154 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 KRTAP26-1Q6PEX3 210 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 BAGE2Q86Y30 109 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 DEFB104AQ8WTQ1 72 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 BORCS7Q96B45 105 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 CHCHD7Q9BUK0 85 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 GNB1LQ9BYB4 327 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 GFRA4Q9GZZ7 299 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 ST20Q9HBF5 79 aa3.84□□□□□ -1.79
CPSF7-210ENST00000474684 C19orf71A6NCJ1 209 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 USP17L23D6RBM5 183 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 PANO1I0J062 215 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 CRPP02741 224 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 ANGP03950 147 aaKnown RBP3.83□□□□□ -1.8
CPSF7-210ENST00000474684 MGPP08493 103 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 IGLC3P0DOY3 106 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 PMCHP20382 165 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 CTRLP40313 264 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 SEC11AP67812 179 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 GAGE6Q13070 117 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 SPATA45Q537H7 98 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 SPANXN1Q5VSR9 72 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 SUMO4Q6EEV6 95 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 Q6ZN92 141 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 CIRBP-AS1Q8TBR5 109 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 RMI2Q96E14 147 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 AP1S3Q96PC3 154 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 CHCHD5Q9BSY4 110 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 C1orf43Q9BWL3 253 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
CPSF7-210ENST00000474684 IGLV10-54A0A075B6I4 117 aa3.82□□□□□ -1.8
CPSF7-210ENST00000474684 TMEM262E9PQX1 116 aa3.82□□□□□ -1.8
CPSF7-210ENST00000474684 F5H697 171 aa3.82□□□□□ -1.8
CPSF7-210ENST00000474684 M0QY20 66 aa3.82□□□□□ -1.8
CPSF7-210ENST00000474684 CCL25O15444 150 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms