RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 PKIGQ9Y2B9 76 aa8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 USP9XQ93008 2570 aaPredicted RBP8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 HELZ2Q9BYK8 2649 aaKnown RBP8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 IGHV1OR15-1A0A075B7D0 117 aa8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 ATOX1O00244 68 aa8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 CD28P10747 220 aa8.32□□□□□ -1.08
SRGAP3-204ENST00000470951 SPTAN1Q13813 2472 aaKnown RBP8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 TMEM61Q8N0U2 210 aa8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 DSCR8Q96T75 97 aa8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 FASNP49327 2511 aaKnown RBP8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 IGHV3-11P01762 117 aa8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 C1orf195Q5TG92 126 aa8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 SDIM1Q6ZPB5 146 aa8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 LINC00643Q86TS7 51 aa8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 PRIMA1Q86XR5 153 aa8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 VSIG2Q96IQ7 327 aa8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 UPK3BQ9BT76 320 aa8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 CYSTM1Q9H1C7 97 aa8.31□□□□□ -1.08
SRGAP3-204ENST00000470951 PSMB8P28062 276 aa8.3□□□□□ -1.08
SRGAP3-204ENST00000470951 ADAMTSL4-AS1Q5T5F5 129 aa8.3□□□□□ -1.08
SRGAP3-204ENST00000470951 CD164L2Q6UWJ8 174 aa8.3□□□□□ -1.08
SRGAP3-204ENST00000470951 ZNF580Q9UK33 172 aa8.3□□□□□ -1.08
SRGAP3-204ENST00000470951 LRRK2Q5S007 2527 aa8.3□□□□□ -1.08
SRGAP3-204ENST00000470951 UBR5O95071 2799 aaPredicted RBP8.3□□□□□ -1.08
SRGAP3-204ENST00000470951 IGLV1-40P01703 118 aa8.3□□□□□ -1.08
SRGAP3-204ENST00000470951 SNRPD3P62318 126 aaKnown RBP8.3□□□□□ -1.08
SRGAP3-204ENST00000470951 CDSNQ15517 529 aa8.3□□□□□ -1.08
SRGAP3-204ENST00000470951 TENM4Q6N022 2769 aa8.29□□□□□ -1.08
SRGAP3-204ENST00000470951 DCHS2Q6V1P9 2916 aa8.29□□□□□ -1.08
SRGAP3-204ENST00000470951 FAM104AQ969W3 186 aa8.29□□□□□ -1.08
SRGAP3-204ENST00000470951 BPESC1Q9GZL8 116 aa8.29□□□□□ -1.08
SRGAP3-204ENST00000470951 UTP20O75691 2785 aaKnown RBP8.28□□□□□ -1.08
SRGAP3-204ENST00000470951 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
SRGAP3-204ENST00000470951 FAM236DA0A1B0GTK5 79 aa8.28□□□□□ -1.08
SRGAP3-204ENST00000470951 ADARB2-AS1A8MUL3 147 aa8.28□□□□□ -1.08
SRGAP3-204ENST00000470951 FAM236CP0DP71 79 aa8.28□□□□□ -1.08
SRGAP3-204ENST00000470951 CLEC2BQ92478 149 aa8.28□□□□□ -1.08
SRGAP3-204ENST00000470951 GCN1Q92616 2671 aaKnown RBP8.28□□□□□ -1.08
SRGAP3-204ENST00000470951 NDUFC2-KCTD14E9PQ53 114 aa8.28□□□□□ -1.08
SRGAP3-204ENST00000470951 RETNQ9HD89 108 aa8.28□□□□□ -1.08
SRGAP3-204ENST00000470951 A6NDX4 124 aa8.27□□□□□ -1.09
SRGAP3-204ENST00000470951 PLA2G2AP14555 144 aa8.27□□□□□ -1.09
SRGAP3-204ENST00000470951 PIK3CD-AS1Q5SR53 167 aa8.27□□□□□ -1.09
SRGAP3-204ENST00000470951 CSMD1Q96PZ7 3565 aa8.27□□□□□ -1.09
SRGAP3-204ENST00000470951 LRBAP50851 2863 aa8.27□□□□□ -1.09
SRGAP3-204ENST00000470951 COPS9Q8WXC6 57 aa8.26□□□□□ -1.09
SRGAP3-204ENST00000470951 TRAV12-2A0A075B6T6 113 aa8.26□□□□□ -1.09
SRGAP3-204ENST00000470951 K7EQG2 157 aa8.26□□□□□ -1.09
SRGAP3-204ENST00000470951 CIRBPQ14011 172 aaKnown RBP8.26□□□□□ -1.09
SRGAP3-204ENST00000470951 A0A1W2PPR1 153 aa8.25□□□□□ -1.09
SRGAP3-204ENST00000470951 NDUFA1O15239 70 aa8.25□□□□□ -1.09
SRGAP3-204ENST00000470951 CFHR3Q02985 330 aa8.25□□□□□ -1.09
SRGAP3-204ENST00000470951 DOPEY1Q5JWR5 2465 aa8.25□□□□□ -1.09
SRGAP3-204ENST00000470951 IGLV5-45A0A087WSX0 123 aa8.24□□□□□ -1.09
SRGAP3-204ENST00000470951 H3BS24 57 aa8.24□□□□□ -1.09
SRGAP3-204ENST00000470951 SPINK13Q1W4C9 94 aa8.24□□□□□ -1.09
SRGAP3-204ENST00000470951 UBE2D4Q9Y2X8 147 aa8.24□□□□□ -1.09
SRGAP3-204ENST00000470951 IGHV3OR16-10A0A075B7F0 116 aa8.24□□□□□ -1.09
SRGAP3-204ENST00000470951 J3QKU1 62 aa8.24□□□□□ -1.09
SRGAP3-204ENST00000470951 COX7A2LO14548 114 aa8.24□□□□□ -1.09
SRGAP3-204ENST00000470951 BRD3OSQ6XYD6 125 aa8.24□□□□□ -1.09
SRGAP3-204ENST00000470951 SERP2Q8N6R1 65 aa8.24□□□□□ -1.09
SRGAP3-204ENST00000470951 HRNRQ86YZ3 2850 aaPredicted RBP8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 H3BUX3 64 aa8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 LY6EQ16553 131 aa8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 IL17DQ8TAD2 202 aa8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 CHCHD7Q9BUK0 85 aa8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 C16orf95Q9H693 158 aa8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 DOPEY2Q9Y3R5 2298 aa8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 A0A0A0MQY5 61 aa8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 IGKV3-20P01619 116 aa8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 Q6ZSV7 163 aa8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
SRGAP3-204ENST00000470951 LINC00528Q8N1L1 170 aa8.22□□□□□ -1.09
SRGAP3-204ENST00000470951 USP9YO00507 2555 aaPredicted RBP8.22□□□□□ -1.09
SRGAP3-204ENST00000470951 AVPP01185 164 aa8.21□□□□□ -1.09
SRGAP3-204ENST00000470951 NPC2P61916 151 aa8.21□□□□□ -1.09
SRGAP3-204ENST00000470951 BLCAPP62952 87 aa8.21□□□□□ -1.09
SRGAP3-204ENST00000470951 RPL18AQ02543 176 aaKnown RBP8.21□□□□□ -1.09
SRGAP3-204ENST00000470951 NACAE9PAV3 2078 aa8.21□□□□□ -1.09
SRGAP3-204ENST00000470951 FAM19A1Q7Z5A9 133 aa8.21□□□□□ -1.1
SRGAP3-204ENST00000470951 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.1
SRGAP3-204ENST00000470951 C10orf105Q8TEF2 133 aa8.21□□□□□ -1.1
SRGAP3-204ENST00000470951 ABCA2Q9BZC7 2435 aa8.2□□□□□ -1.1
SRGAP3-204ENST00000470951 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
SRGAP3-204ENST00000470951 NDUFC2O95298 119 aa8.2□□□□□ -1.1
SRGAP3-204ENST00000470951 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
SRGAP3-204ENST00000470951 FAM222AQ5U5X8 452 aa8.2□□□□□ -1.1
SRGAP3-204ENST00000470951 DAND5Q8N907 189 aa8.2□□□□□ -1.1
SRGAP3-204ENST00000470951 CDKN2A-AS1Q9UH64 79 aa8.2□□□□□ -1.1
SRGAP3-204ENST00000470951 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
SRGAP3-204ENST00000470951 CRYBG3Q68DQ2 2970 aa8.2□□□□□ -1.1
SRGAP3-204ENST00000470951 CENPEQ02224 2701 aa8.19□□□□□ -1.1
SRGAP3-204ENST00000470951 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
SRGAP3-204ENST00000470951 A8MTW9 85 aa8.18□□□□□ -1.1
SRGAP3-204ENST00000470951 INAFM2P0DMQ5 153 aa8.18□□□□□ -1.1
SRGAP3-204ENST00000470951 FAM19A3Q7Z5A8 133 aa8.18□□□□□ -1.1
SRGAP3-204ENST00000470951 LINC00467Q9BRT7 94 aa8.18□□□□□ -1.1
SRGAP3-204ENST00000470951 IGHV3-73A0A0B4J1V6 119 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms