RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 RHOHQ15669 191 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 ETDBQ3ZM63 59 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 SPATA45Q537H7 98 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 TSKUQ8WUA8 353 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 TRGV9Q99603 122 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 MADDQ8WXG6 1647 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 BIVM-ERCC5R4GMW8 1640 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 PTPRMP28827 1452 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 MED13Q9UHV7 2174 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 MROH2AA6NES4 1674 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 WIZO95785 1651 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 EFCAB6Q5THR3 1501 aa1.1□□□□□ -2.23
BRCA2-202ENST00000470094 IQGAP2Q13576 1575 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 ARFGEF2Q9Y6D5 1785 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 IQGAP3Q86VI3 1631 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 MAP3K4Q9Y6R4 1608 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 NUPR2A6NF83 97 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 ATOX1O00244 68 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 NDUFC1O43677 76 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 SIX6O95475 246 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 CCKP06307 115 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 SFTA3P0C7M3 94 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 NPC2P61916 151 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 SNRPFP62306 86 aaKnown RBP1.09□□□□□ -2.23
BRCA2-202ENST00000470094 CFAP126Q5VTH2 177 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 LYPD5Q6UWN5 251 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 SERP2Q8N6R1 65 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 Q8N8P6 123 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 DYNLRB2Q8TF09 96 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 HIGD1BQ9P298 99 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 SPCS1Q9Y6A9 102 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 TSC2P49815 1807 aa1.09□□□□□ -2.23
BRCA2-202ENST00000470094 E9PCH4 1651 aa1.09□□□□□ -2.24
BRCA2-202ENST00000470094 ARHGEF12Q9NZN5 1544 aa1.09□□□□□ -2.24
BRCA2-202ENST00000470094 XRN1Q8IZH2 1706 aaKnown RBP1.09□□□□□ -2.24
BRCA2-202ENST00000470094 IFT172Q9UG01 1749 aa1.09□□□□□ -2.24
BRCA2-202ENST00000470094 SIPA1L3O60292 1781 aaPredicted RBP1.08□□□□□ -2.24
BRCA2-202ENST00000470094 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
BRCA2-202ENST00000470094 MYO7AQ13402 2215 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 KIAA0100Q14667 2235 aaKnown RBP1.08□□□□□ -2.24
BRCA2-202ENST00000470094 ABCA5Q8WWZ7 1642 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 ALKQ9UM73 1620 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 EDC4Q6P2E9 1401 aaKnown RBP1.08□□□□□ -2.24
BRCA2-202ENST00000470094 PLXNA1Q9UIW2 1896 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 ROBO1Q9Y6N7 1651 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 NKTRP30414 1462 aaKnown RBP1.08□□□□□ -2.24
BRCA2-202ENST00000470094 CXorf51AA0A1B0GTR3 108 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 TMEM30CPA0ZSE6 113 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 NAP1L6A6NFF2 107 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 UMAD1C9J7I0 102 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 H3BUT2 72 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 M0R129 80 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 SMIM13P0DJ93 91 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 KRTDAPP60985 99 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 KLKP1Q107X0 134 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 DEFB132Q7Z7B7 95 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 NDUFA11Q86Y39 141 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 DMAC1Q96GE9 116 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 MGST2Q99735 147 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 LIMD2Q9BT23 127 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 MRPL35Q9NZE8 188 aaKnown RBP1.08□□□□□ -2.24
BRCA2-202ENST00000470094 ITSN1Q15811 1721 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 ATP7AQ04656 1500 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 KIAA0586Q9BVV6 1533 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 SAMD9Q5K651 1589 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 LAMC3Q9Y6N6 1575 aa1.08□□□□□ -2.24
BRCA2-202ENST00000470094 KIAA0556O60303 1618 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 MYOM1P52179 1685 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 COL4A6Q14031 1691 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 POLR1AO95602 1720 aaPredicted RBP1.07□□□□□ -2.24
BRCA2-202ENST00000470094 DLEC1Q9Y238 1755 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 hADV29S1A0JD25 119 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 F2Z2F3 143 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 H7BZZ5 65 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 GNGT2O14610 69 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 COX8AP10176 69 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 KRTAP10-4P60372 401 aaPredicted RBP1.07□□□□□ -2.24
BRCA2-202ENST00000470094 INSL4Q14641 139 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 CSAG1Q6PB30 78 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 LINC00643Q86TS7 51 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 DSCR8Q96T75 97 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 NWD1Q149M9 1564 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 CDC42BPGQ6DT37 1551 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 TOPAZ1Q8N9V7 1692 aa1.07□□□□□ -2.24
BRCA2-202ENST00000470094 CD163L1Q9NR16 1453 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 NCOA6Q14686 2063 aaPredicted RBP1.06□□□□□ -2.24
BRCA2-202ENST00000470094 SPTBP11277 2137 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 ABCC6O95255 1503 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 AGLP35573 1532 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 ASXL1Q8IXJ9 1541 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 UNC13CQ8NB66 2214 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 TRBV7-3A0A075B6L6 115 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 TRAV13-2A0A0B4J235 113 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 TRBV10-1A0A0K0K1A3 114 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 PIRTP0C851 137 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 C3orf79P0CE67 100 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 EFNA4P52798 201 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 UBE2D3P61077 147 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 UBE2D2P62837 147 aa1.06□□□□□ -2.24
BRCA2-202ENST00000470094 TMEM170BQ5T4T1 132 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms