RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 SLC48A1Q6P1K1 146 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 CYP2G1PQ6ZSU1 146 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 Q8TAT8 98 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 LINC01600Q96MT4 127 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 ABCC1P33527 1531 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 CLASP1Q7Z460 1538 aa1.75□□□□□ -2.13
XRN1-207ENST00000468894 TIAM2Q8IVF5 1701 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 UNC13BO14795 1591 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 KANTRA0A1W2PQU2 76 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 SMIM13P0DJ93 91 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 MIR22HGQ0VDD5 57 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 CASC2Q6XLA1 102 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 CDC42SE1Q9NRR8 79 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 HMGXB3Q12766 1538 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 NEXMIFQ5QGS0 1516 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 KCPQ6ZWJ8 1503 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 NRXN2Q9P2S2 1712 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 ALS2Q96Q42 1657 aa1.74□□□□□ -2.13
XRN1-207ENST00000468894 TRBV10-3A0A0K0K1G6 114 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 TEX49A0A1B0GTD5 131 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 C10orf142B7Z368 130 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 F2Z2F3 143 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 SNRPFP62306 86 aaKnown RBP1.73□□□□□ -2.13
XRN1-207ENST00000468894 ZNF791Q3KP31 576 aaPredicted RBP1.73□□□□□ -2.13
XRN1-207ENST00000468894 SFTA2Q6UW10 78 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 NDUFA11Q86Y39 141 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 TMEM254Q8TBM7 123 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 CYP4F30PQ9H0H9 118 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 MANBALQ9NQG1 85 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 PKD1L3Q7Z443 1732 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 ZFHX2Q9C0A1 2572 aaPredicted RBP1.73□□□□□ -2.13
XRN1-207ENST00000468894 ZNF142P52746 1687 aaPredicted RBP1.73□□□□□ -2.13
XRN1-207ENST00000468894 KIAA0556O60303 1618 aa1.73□□□□□ -2.13
XRN1-207ENST00000468894 PRRC2BQ5JSZ5 2229 aaKnown RBP1.72□□□□□ -2.13
XRN1-207ENST00000468894 ARHGEF5Q12774 1597 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 BCORQ6W2J9 1755 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 COL4A1P02462 1669 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 COL4A5P29400 1685 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 IQSEC2Q5JU85 1478 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 LRRC9Q6ZRR7 1453 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 TRAV22A0A0B4J277 110 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 CXorf51AA0A1B0GTR3 108 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 BCE1O60756 84 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 CXCL8P10145 99 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 UBE2D3P61077 147 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 UBE2D2P62837 147 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 ZNF56Q15929 161 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 Q5VV11 94 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 XAF1Q6GPH4 301 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 C2orf82Q6UX34 121 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 VMO1Q7Z5L0 202 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 Q8N6K4 173 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 PROK2Q9HC23 129 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 PSORS1C2Q9UIG4 136 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 ALKQ9UM73 1620 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 FREM1Q5H8C1 2179 aa1.72□□□□□ -2.13
XRN1-207ENST00000468894 SYCP2Q9BX26 1530 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 ZNF831Q5JPB2 1677 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 ZFHX4Q86UP3 3567 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 ZFHX3Q15911 3703 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 FBN3Q75N90 2809 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 PAPPAQ13219 1627 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 TRBV7-1A0A0A6YYK4 115 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 TRGV4A0A0C4DH28 118 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 A6NIN4 97 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 FAM223BA6NKX1 122 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 ODF3BA8MYP8 253 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 ERC2-IT1O76042 136 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 KLKP1Q107X0 134 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 TMEM170BQ5T4T1 132 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 LINC00643Q86TS7 51 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 C9orf163Q8N9P6 203 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 HILPDAQ9Y5L2 63 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 SHPRHQ149N8 1683 aa1.71□□□□□ -2.14
XRN1-207ENST00000468894 RALGAPBQ86X10 1494 aa1.7□□□□□ -2.14
XRN1-207ENST00000468894 MED13LQ71F56 2210 aa1.7□□□□□ -2.14
XRN1-207ENST00000468894 TRAV10A0A0B4J240 114 aa1.7□□□□□ -2.14
XRN1-207ENST00000468894 C3orf79P0CE67 100 aa1.7□□□□□ -2.14
XRN1-207ENST00000468894 COX8AP10176 69 aa1.7□□□□□ -2.14
XRN1-207ENST00000468894 CDC42BPGQ6DT37 1551 aa1.7□□□□□ -2.14
XRN1-207ENST00000468894 SDK1Q7Z5N4 2213 aa1.7□□□□□ -2.14
XRN1-207ENST00000468894 DLEC1Q9Y238 1755 aa1.7□□□□□ -2.14
XRN1-207ENST00000468894 ABCA5Q8WWZ7 1642 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 POLR1AO95602 1720 aaPredicted RBP1.69□□□□□ -2.14
XRN1-207ENST00000468894 TJP1Q07157 1748 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 UGGT1Q9NYU2 1555 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 COL6A3P12111 3177 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 TRBV7-3A0A075B6L6 115 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 TRAV12-1A0A0B4J245 112 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 TRAV12-3A0A0B4J271 114 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 A0A0J9YX75 114 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 IQCF6A8MYZ5 107 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 F8WEM9 126 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 ACYP1P07311 99 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 KRTAP21-3Q3LHN1 58 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 DEFB121Q5J5C9 76 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 CSAG1Q6PB30 78 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 KRTAP26-1Q6PEX3 210 aa1.69□□□□□ -2.14
XRN1-207ENST00000468894 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.69□□□□□ -2.14
XRN1-207ENST00000468894 C4orf3Q8WVX3 66 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms