RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 RS1O15537 224 aa10.49□□□□□ -0.73
SEC16A-208ENST00000467838 NHLRC4P0CG21 123 aaPredicted RBP10.49□□□□□ -0.73
SEC16A-208ENST00000467838 DEFB113Q30KQ7 82 aa10.49□□□□□ -0.73
SEC16A-208ENST00000467838 FAM19A3Q7Z5A8 133 aa10.49□□□□□ -0.73
SEC16A-208ENST00000467838 IGLV5-39A0A0G2JS06 123 aa10.48□□□□□ -0.73
SEC16A-208ENST00000467838 GAGE2BQ13066 116 aa10.48□□□□□ -0.73
SEC16A-208ENST00000467838 GAGE2EQ4V326 116 aa10.48□□□□□ -0.73
SEC16A-208ENST00000467838 GAGE2DQ9UEU5 116 aa10.48□□□□□ -0.73
SEC16A-208ENST00000467838 ABCA12Q86UK0 2595 aa10.48□□□□□ -0.73
SEC16A-208ENST00000467838 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
SEC16A-208ENST00000467838 CRLF1O75462 422 aa10.48□□□□□ -0.73
SEC16A-208ENST00000467838 HTN1P15515 57 aa10.48□□□□□ -0.73
SEC16A-208ENST00000467838 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
SEC16A-208ENST00000467838 SLURP1P55000 103 aa10.47□□□□□ -0.73
SEC16A-208ENST00000467838 Q6YL49 198 aa10.47□□□□□ -0.73
SEC16A-208ENST00000467838 NDUFV3P56181 108 aaKnown RBP10.46□□□□□ -0.73
SEC16A-208ENST00000467838 LRRC75A-AS1Q8N1F1 130 aa10.46□□□□□ -0.73
SEC16A-208ENST00000467838 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.46□□□□□ -0.73
SEC16A-208ENST00000467838 TMEM101Q96IK0 257 aa10.46□□□□□ -0.73
SEC16A-208ENST00000467838 MAP6D1Q9H9H5 199 aa10.46□□□□□ -0.73
SEC16A-208ENST00000467838 PRM2P04554 102 aa10.46□□□□□ -0.74
SEC16A-208ENST00000467838 Q6ZSV7 163 aa10.46□□□□□ -0.74
SEC16A-208ENST00000467838 Q8N2B8 174 aa10.46□□□□□ -0.74
SEC16A-208ENST00000467838 CLEC2BQ92478 149 aa10.46□□□□□ -0.74
SEC16A-208ENST00000467838 INSP01308 110 aa10.45□□□□□ -0.74
SEC16A-208ENST00000467838 NAV2Q8IVL1 2488 aa10.45□□□□□ -0.74
SEC16A-208ENST00000467838 IGHV3OR16-12A0A075B7B8 117 aa10.45□□□□□ -0.74
SEC16A-208ENST00000467838 HERVK_113P63121 156 aa10.45□□□□□ -0.74
SEC16A-208ENST00000467838 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
SEC16A-208ENST00000467838 IL17DQ8TAD2 202 aa10.45□□□□□ -0.74
SEC16A-208ENST00000467838 CITED2Q99967 270 aaPredicted RBP10.45□□□□□ -0.74
SEC16A-208ENST00000467838 PPDPFQ9H3Y8 114 aa10.45□□□□□ -0.74
SEC16A-208ENST00000467838 PEMTQ9UBM1 199 aa10.45□□□□□ -0.74
SEC16A-208ENST00000467838 GAGE5Q13069 117 aa10.44□□□□□ -0.74
SEC16A-208ENST00000467838 GAGE6Q13070 117 aa10.44□□□□□ -0.74
SEC16A-208ENST00000467838 C18orf65Q6ZTR6 163 aa10.44□□□□□ -0.74
SEC16A-208ENST00000467838 IGHV3-38A0A0C4DH36 116 aa10.43□□□□□ -0.74
SEC16A-208ENST00000467838 NPC2P61916 151 aa10.43□□□□□ -0.74
SEC16A-208ENST00000467838 DEFB136Q30KP8 78 aa10.43□□□□□ -0.74
SEC16A-208ENST00000467838 LINC00308Q8TCZ7 52 aa10.43□□□□□ -0.74
SEC16A-208ENST00000467838 LINC01587Q99440 93 aa10.43□□□□□ -0.74
SEC16A-208ENST00000467838 CSDC2Q9Y534 153 aaKnown RBP10.43□□□□□ -0.74
SEC16A-208ENST00000467838 CREBBPQ92793 2442 aa10.43□□□□□ -0.74
SEC16A-208ENST00000467838 CIRBPQ14011 172 aaKnown RBP10.43□□□□□ -0.74
SEC16A-208ENST00000467838 LINC00242Q5T6M2 205 aa10.43□□□□□ -0.74
SEC16A-208ENST00000467838 C4orf3Q8WVX3 66 aa10.43□□□□□ -0.74
SEC16A-208ENST00000467838 APCP25054 2843 aa10.42□□□□□ -0.74
SEC16A-208ENST00000467838 COX6A2Q02221 97 aa10.42□□□□□ -0.74
SEC16A-208ENST00000467838 MAPK1IP1LQ8NDC0 245 aa10.42□□□□□ -0.74
SEC16A-208ENST00000467838 COPS9Q8WXC6 57 aa10.42□□□□□ -0.74
SEC16A-208ENST00000467838 DAND5Q8N907 189 aa10.41□□□□□ -0.74
SEC16A-208ENST00000467838 SMIM1B2RUZ4 78 aa10.41□□□□□ -0.74
SEC16A-208ENST00000467838 COX7A2LO14548 114 aa10.41□□□□□ -0.74
SEC16A-208ENST00000467838 SHISA2Q6UWI4 295 aa10.41□□□□□ -0.74
SEC16A-208ENST00000467838 Q96MF0 132 aa10.41□□□□□ -0.74
SEC16A-208ENST00000467838 Q9H8V8 135 aa10.41□□□□□ -0.74
SEC16A-208ENST00000467838 MAP1AP78559 2803 aaPredicted RBP10.4□□□□□ -0.74
SEC16A-208ENST00000467838 DEFB114Q30KQ6 69 aa10.4□□□□□ -0.74
SEC16A-208ENST00000467838 KRTAP1-3Q8IUG1 177 aa10.4□□□□□ -0.74
SEC16A-208ENST00000467838 SVIPQ8NHG7 77 aa10.4□□□□□ -0.74
SEC16A-208ENST00000467838 ZNF625Q96I27 306 aaPredicted RBP10.4□□□□□ -0.74
SEC16A-208ENST00000467838 GCN1Q92616 2671 aaKnown RBP10.4□□□□□ -0.75
SEC16A-208ENST00000467838 TRBV10-1A0A0K0K1A3 114 aa10.39□□□□□ -0.75
SEC16A-208ENST00000467838 TRBV7-7A0A0K0K1E9 115 aa10.39□□□□□ -0.75
SEC16A-208ENST00000467838 DGAT2L7PQ6IED9 249 aa10.39□□□□□ -0.75
SEC16A-208ENST00000467838 TTC32Q5I0X7 151 aa10.39□□□□□ -0.75
SEC16A-208ENST00000467838 CR1P17927 2039 aa10.39□□□□□ -0.75
SEC16A-208ENST00000467838 F5H768 121 aa10.38□□□□□ -0.75
SEC16A-208ENST00000467838 SOSTDC1Q6X4U4 206 aa10.38□□□□□ -0.75
SEC16A-208ENST00000467838 DYNLRB2Q8TF09 96 aa10.38□□□□□ -0.75
SEC16A-208ENST00000467838 LINC00694P0DN24 101 aa10.37□□□□□ -0.75
SEC16A-208ENST00000467838 GAGE12JA6NER3 117 aa10.37□□□□□ -0.75
SEC16A-208ENST00000467838 GAGE7O76087 117 aa10.37□□□□□ -0.75
SEC16A-208ENST00000467838 GAGE12FP0CL80 117 aa10.37□□□□□ -0.75
SEC16A-208ENST00000467838 GAGE12GP0CL81 117 aa10.37□□□□□ -0.75
SEC16A-208ENST00000467838 GAGE12IP0CL82 117 aa10.37□□□□□ -0.75
SEC16A-208ENST00000467838 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
SEC16A-208ENST00000467838 GAGE4Q13068 117 aa10.37□□□□□ -0.75
SEC16A-208ENST00000467838 DAZ2Q13117 558 aaKnown RBP10.37□□□□□ -0.75
SEC16A-208ENST00000467838 DAZ4Q86SG3 579 aaKnown RBP10.37□□□□□ -0.75
SEC16A-208ENST00000467838 DAZ3Q9NR90 486 aaKnown RBP10.37□□□□□ -0.75
SEC16A-208ENST00000467838 K7EQD1 137 aa10.36□□□□□ -0.75
SEC16A-208ENST00000467838 TRACP01848 142 aa10.36□□□□□ -0.75
SEC16A-208ENST00000467838 ACYP1P07311 99 aa10.36□□□□□ -0.75
SEC16A-208ENST00000467838 HERV-K104P63124 156 aa10.36□□□□□ -0.75
SEC16A-208ENST00000467838 ODF3L2Q3SX64 289 aa10.36□□□□□ -0.75
SEC16A-208ENST00000467838 C1orf158Q8N1D5 194 aa10.36□□□□□ -0.75
SEC16A-208ENST00000467838 FASNP49327 2511 aaKnown RBP10.36□□□□□ -0.75
SEC16A-208ENST00000467838 TRAV25A0A0B4J276 109 aa10.35□□□□□ -0.75
SEC16A-208ENST00000467838 NTM-AS1Q6ZSK4 140 aa10.35□□□□□ -0.75
SEC16A-208ENST00000467838 RPL36AP83881 106 aaKnown RBP10.35□□□□□ -0.75
SEC16A-208ENST00000467838 WFDC11Q8NEX6 87 aa10.35□□□□□ -0.75
SEC16A-208ENST00000467838 RPL36ALQ969Q0 106 aaKnown RBP10.35□□□□□ -0.75
SEC16A-208ENST00000467838 B5MCH6 92 aa10.34□□□□□ -0.75
SEC16A-208ENST00000467838 CDC42SE2Q9NRR3 84 aa10.34□□□□□ -0.75
SEC16A-208ENST00000467838 CCDC179H3BU77 68 aa10.34□□□□□ -0.75
SEC16A-208ENST00000467838 PRIMA1Q86XR5 153 aa10.34□□□□□ -0.75
SEC16A-208ENST00000467838 XCL2Q9UBD3 114 aa10.34□□□□□ -0.75
SEC16A-208ENST00000467838 SS18L2Q9UHA2 77 aa10.34□□□□□ -0.75
SEC16A-208ENST00000467838 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms