RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 TMEM101Q96IK0 257 aa9.18□□□□□ -0.94
ARHGEF3-204ENST00000465659 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
ARHGEF3-204ENST00000465659 KHDC1LQ5JSQ8 128 aa9.18□□□□□ -0.94
ARHGEF3-204ENST00000465659 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
ARHGEF3-204ENST00000465659 IGHV3OR16-12A0A075B7B8 117 aa9.18□□□□□ -0.94
ARHGEF3-204ENST00000465659 HERVK_113P63121 156 aa9.18□□□□□ -0.94
ARHGEF3-204ENST00000465659 C1orf158Q8N1D5 194 aa9.18□□□□□ -0.94
ARHGEF3-204ENST00000465659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.18□□□□□ -0.94
ARHGEF3-204ENST00000465659 MYO9AB2RTY4 2548 aa9.17□□□□□ -0.94
ARHGEF3-204ENST00000465659 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
ARHGEF3-204ENST00000465659 COX6CP09669 75 aa9.17□□□□□ -0.94
ARHGEF3-204ENST00000465659 KRTAP10-9P60411 292 aa9.17□□□□□ -0.94
ARHGEF3-204ENST00000465659 NTN5Q8WTR8 489 aaPredicted RBP9.17□□□□□ -0.94
ARHGEF3-204ENST00000465659 NF1P21359 2839 aa9.17□□□□□ -0.94
ARHGEF3-204ENST00000465659 ABCA12Q86UK0 2595 aa9.17□□□□□ -0.94
ARHGEF3-204ENST00000465659 AKAP9Q99996 3911 aa9.17□□□□□ -0.94
ARHGEF3-204ENST00000465659 DGAT2L7PQ6IED9 249 aa9.17□□□□□ -0.94
ARHGEF3-204ENST00000465659 XCL2Q9UBD3 114 aa9.17□□□□□ -0.94
ARHGEF3-204ENST00000465659 TEX15Q9BXT5 2789 aa9.16□□□□□ -0.94
ARHGEF3-204ENST00000465659 COX6A2Q02221 97 aa9.16□□□□□ -0.94
ARHGEF3-204ENST00000465659 LINC00242Q5T6M2 205 aa9.16□□□□□ -0.94
ARHGEF3-204ENST00000465659 STHQ8IWL8 128 aa9.16□□□□□ -0.94
ARHGEF3-204ENST00000465659 H3BT86 120 aa9.15□□□□□ -0.94
ARHGEF3-204ENST00000465659 CIRBPQ14011 172 aaKnown RBP9.15□□□□□ -0.94
ARHGEF3-204ENST00000465659 Q6ZSV7 163 aa9.15□□□□□ -0.94
ARHGEF3-204ENST00000465659 ZNF469Q96JG9 3925 aaPredicted RBP9.15□□□□□ -0.95
ARHGEF3-204ENST00000465659 DAZ2Q13117 558 aaKnown RBP9.15□□□□□ -0.95
ARHGEF3-204ENST00000465659 DAZ4Q86SG3 579 aaKnown RBP9.15□□□□□ -0.95
ARHGEF3-204ENST00000465659 DAZ3Q9NR90 486 aaKnown RBP9.15□□□□□ -0.95
ARHGEF3-204ENST00000465659 UBR5O95071 2799 aaPredicted RBP9.14□□□□□ -0.95
ARHGEF3-204ENST00000465659 H7C423 109 aa9.14□□□□□ -0.95
ARHGEF3-204ENST00000465659 LST1O00453 97 aa9.14□□□□□ -0.95
ARHGEF3-204ENST00000465659 Q96MF0 132 aa9.14□□□□□ -0.95
ARHGEF3-204ENST00000465659 CITED1Q99966 193 aa9.14□□□□□ -0.95
ARHGEF3-204ENST00000465659 LRRK2Q5S007 2527 aa9.14□□□□□ -0.95
ARHGEF3-204ENST00000465659 TRGV1A0A0A0MS02 117 aa9.14□□□□□ -0.95
ARHGEF3-204ENST00000465659 K7EQD1 137 aa9.14□□□□□ -0.95
ARHGEF3-204ENST00000465659 RPL36AP83881 106 aaKnown RBP9.14□□□□□ -0.95
ARHGEF3-204ENST00000465659 RPL36ALQ969Q0 106 aaKnown RBP9.14□□□□□ -0.95
ARHGEF3-204ENST00000465659 PTPN13Q12923 2485 aa9.13□□□□□ -0.95
ARHGEF3-204ENST00000465659 TRAV4A0A0B4J268 109 aa9.13□□□□□ -0.95
ARHGEF3-204ENST00000465659 LINC00694P0DN24 101 aa9.13□□□□□ -0.95
ARHGEF3-204ENST00000465659 NPC2P61916 151 aa9.13□□□□□ -0.95
ARHGEF3-204ENST00000465659 KRTAP1-3Q8IUG1 177 aa9.13□□□□□ -0.95
ARHGEF3-204ENST00000465659 TEX49A0A1B0GTD5 131 aa9.13□□□□□ -0.95
ARHGEF3-204ENST00000465659 C2orf82Q6UX34 121 aa9.13□□□□□ -0.95
ARHGEF3-204ENST00000465659 NTM-AS1Q6ZSK4 140 aa9.13□□□□□ -0.95
ARHGEF3-204ENST00000465659 UBE2WQ96B02 151 aa9.13□□□□□ -0.95
ARHGEF3-204ENST00000465659 SMIM1B2RUZ4 78 aa9.12□□□□□ -0.95
ARHGEF3-204ENST00000465659 PRB1P04280 392 aa9.12□□□□□ -0.95
ARHGEF3-204ENST00000465659 LINC00308Q8TCZ7 52 aa9.12□□□□□ -0.95
ARHGEF3-204ENST00000465659 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
ARHGEF3-204ENST00000465659 CITED2Q99967 270 aaPredicted RBP9.12□□□□□ -0.95
ARHGEF3-204ENST00000465659 Q9H8V8 135 aa9.12□□□□□ -0.95
ARHGEF3-204ENST00000465659 TEX29Q8N6K0 151 aa9.12□□□□□ -0.95
ARHGEF3-204ENST00000465659 PPDPFQ9H3Y8 114 aa9.12□□□□□ -0.95
ARHGEF3-204ENST00000465659 SONP18583 2426 aaKnown RBP9.12□□□□□ -0.95
ARHGEF3-204ENST00000465659 NAV2Q8IVL1 2488 aa9.12□□□□□ -0.95
ARHGEF3-204ENST00000465659 Q6ZTI0 123 aa9.11□□□□□ -0.95
ARHGEF3-204ENST00000465659 DAND5Q8N907 189 aa9.11□□□□□ -0.95
ARHGEF3-204ENST00000465659 CDC42SE2Q9NRR3 84 aa9.11□□□□□ -0.95
ARHGEF3-204ENST00000465659 C2CD3Q4AC94 2353 aa9.11□□□□□ -0.95
ARHGEF3-204ENST00000465659 DEFB121Q5J5C9 76 aa9.11□□□□□ -0.95
ARHGEF3-204ENST00000465659 HIST2H2BDQ6DRA6 164 aa9.11□□□□□ -0.95
ARHGEF3-204ENST00000465659 CLEC2BQ92478 149 aa9.11□□□□□ -0.95
ARHGEF3-204ENST00000465659 ZNF625Q96I27 306 aaPredicted RBP9.11□□□□□ -0.95
ARHGEF3-204ENST00000465659 ZNF462Q96JM2 2506 aa9.11□□□□□ -0.95
ARHGEF3-204ENST00000465659 F5H768 121 aa9.1□□□□□ -0.95
ARHGEF3-204ENST00000465659 CCL24O00175 119 aa9.1□□□□□ -0.95
ARHGEF3-204ENST00000465659 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
ARHGEF3-204ENST00000465659 DNAJC9-AS1A6NH13 148 aa9.09□□□□□ -0.95
ARHGEF3-204ENST00000465659 BBC3Q96PG8 261 aaPredicted RBP9.09□□□□□ -0.95
ARHGEF3-204ENST00000465659 CHD6Q8TD26 2715 aa9.09□□□□□ -0.95
ARHGEF3-204ENST00000465659 CMC4P56277 68 aaPredicted RBP9.09□□□□□ -0.95
ARHGEF3-204ENST00000465659 EPG5Q9HCE0 2579 aa9.09□□□□□ -0.95
ARHGEF3-204ENST00000465659 NDUFA7O95182 113 aa9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 HERV-K104P63124 156 aa9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 FAM240AA0A1B0GVK7 77 aa9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 GIG44P09565 113 aaPredicted RBP9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 WNK1Q9H4A3 2382 aa9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 NBPF19A0A087WUL8 3843 aa9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 TRAV13-1A0A0B4J241 112 aa9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 SNCGO76070 127 aa9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 Q6Q795 121 aa9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 SHISA2Q6UWI4 295 aa9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 ZNF843Q8N446 348 aa9.08□□□□□ -0.96
ARHGEF3-204ENST00000465659 PLAC8L1A1L4L8 177 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 SOSTDC1Q6X4U4 206 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 FAM110AQ9BQ89 295 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 USP24Q9UPU5 2620 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 GAGE12JA6NER3 117 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 COX7A2LO14548 114 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 GAGE4Q13068 117 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 GAGE5Q13069 117 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 MRPL23Q16540 153 aaKnown RBP9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 PRIMA1Q86XR5 153 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 C16orf74Q96GX8 76 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 TMEM243Q9BU79 118 aa9.07□□□□□ -0.96
ARHGEF3-204ENST00000465659 A0A1W2PRX2 142 aa9.06□□□□□ -0.96
ARHGEF3-204ENST00000465659 NOP10Q9NPE3 64 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms