RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 ZC2HC1AQ96GY0 325 aa1.56□□□□□ -2.16
CCDC144A-211ENST00000463809 WDR61Q9GZS3 305 aaKnown RBP1.56□□□□□ -2.16
CCDC144A-211ENST00000463809 NOP10Q9NPE3 64 aaKnown RBP1.56□□□□□ -2.16
CCDC144A-211ENST00000463809 CMC2Q9NRP2 79 aa1.56□□□□□ -2.16
CCDC144A-211ENST00000463809 ARMC1Q9NVT9 282 aa1.56□□□□□ -2.16
CCDC144A-211ENST00000463809 HLA-DRB4X5D2U9 266 aa1.56□□□□□ -2.16
CCDC144A-211ENST00000463809 USH2AO75445 5202 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 IGKV1-9A0A0C4DH69 117 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 TRBV10-2A0A0K0K1G8 114 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 FABP5P3A8MUU1 101 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 M0R2T5 61 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 IGHV3-30P01768 117 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 IGHV3-33P01772 117 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 IGHV3-30-5P0DP03 117 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 RPL5P46777 297 aaKnown RBP1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 RPS20P60866 119 aaKnown RBP1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 PSME3P61289 254 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 PPP3R1P63098 170 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 CCL20P78556 96 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 PRCDQ00LT1 54 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 ELOBQ15370 118 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 LYPD5Q6UWN5 251 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 SPINK6Q6UWN8 80 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 FOXI2Q6ZQN5 318 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 WFDC10BQ8IUB3 73 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 OR8J3Q8NGG0 315 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 OR51A2Q8NGJ7 313 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 OR5D14Q8NGL3 314 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 MCFD2Q8NI22 146 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 MBD3L1Q8WWY6 194 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 COMMD5Q9GZQ3 224 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 SLC35B3Q9H1N7 401 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 TP73-AS1Q9UF72 201 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 LPAP08519 4548 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 DNAH8Q96JB1 4490 aa1.55□□□□□ -2.16
CCDC144A-211ENST00000463809 HMGN1P05114 100 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 UBE2D1P51668 147 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 DEFA1P59665 94 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 WFDC2Q14508 124 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 HMGN3Q15651 99 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 KRTAP20-1Q3LI63 56 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 HACD4Q5VWC8 232 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 TOMM20LQ6UXN7 152 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 DHFR2Q86XF0 187 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 GDPD1Q8N9F7 314 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 OR8D4Q8NGM9 314 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 MRPL30Q8TCC3 161 aaKnown RBP1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 HOPXQ9BPY8 73 aaPredicted RBP1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 C20orf27Q9GZN8 174 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 RNASE7Q9H1E1 156 aaKnown RBP1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 LINC00846Q9NV44 126 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 GID8Q9NWU2 228 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 GNG8Q9UK08 70 aa1.54□□□□□ -2.16
CCDC144A-211ENST00000463809 TRAV1-1A0A0B4J248 108 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 TRBV6-5A0A0K0K1A5 114 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 IBA57-AS1B1ANH7 110 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 SHBGP04278 402 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 CD2P06729 351 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 RPSAP08865 295 aaKnown RBP1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 HTR1AP08908 422 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 METTL15P1P0C7V9 234 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 ZNF93P35789 620 aaPredicted RBP1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 ETV6P41212 452 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 FXYD2P54710 66 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 VBP1P61758 197 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 RHOBP62745 196 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 SPINK13Q1W4C9 94 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 SAMD13Q5VXD3 122 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 RPL22L1Q6P5R6 122 aaKnown RBP1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 ARPINQ7Z6K5 226 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 IFT20Q8IY31 132 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 TMEM263Q8WUH6 116 aaKnown RBP1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 SIGMAR1Q99720 223 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 PRRT1Q99946 306 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 GINS4Q9BRT9 223 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 ARL2BPQ9Y2Y0 163 aa1.53□□□□□ -2.16
CCDC144A-211ENST00000463809 TRAV12-2A0A075B6T6 113 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 TRGV1A0A0A0MS02 117 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 M0R2Z0 102 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 TRAPPC2P0DI81 140 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 TRAPPC2BP0DI82 140 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 HIST1H2BOP23527 126 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 HIST1H2BBP33778 126 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 HIST1H2BDP58876 126 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 DEFB1P60022 68 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 HIST1H2BCP62807 126 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 HIST2H2BEQ16778 126 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 IAH1Q2TAA2 248 aaPredicted RBP1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 LINC01556Q5JQF7 62 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 GDF5OSQ5U4N7 250 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 AADACL3Q5VUY0 350 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 FP248Q71RG6 208 aaPredicted RBP1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 C12orf45Q8N5I9 185 aaPredicted RBP1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 ANKRD29Q8N6D5 301 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 OR10J5Q8NHC4 309 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 Q8TAT8 98 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 AP3S1Q92572 193 aa1.52□□□□□ -2.17
CCDC144A-211ENST00000463809 HIST1H2BHQ93079 126 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms