RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 LAMTOR2Q9Y2Q5 125 aa3.81□□□□□ -1.8
VPS36-202ENST00000462289 CSDC2Q9Y534 153 aaKnown RBP3.81□□□□□ -1.8
VPS36-202ENST00000462289 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
VPS36-202ENST00000462289 TRBV25-1A0A075B6N4 114 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 TRAV9-2A0A087WT02 112 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 IGHV1-24A0A0C4DH33 117 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 M0R2N4 97 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 SSTP61278 116 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 MPV17L2Q567V2 206 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 OR10J3Q5JRS4 329 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 MRPL54Q6P161 138 aaKnown RBP3.8□□□□□ -1.8
VPS36-202ENST00000462289 NFE4Q86UQ8 179 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 SVBPQ8N300 66 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 MAPKAPK5-AS1Q8N8E1 139 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 C20orf203Q8NBC4 194 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 GNB1LQ9BYB4 327 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 DNAH8Q96JB1 4490 aa3.8□□□□□ -1.8
VPS36-202ENST00000462289 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 D6R8Y8 96 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 I3L3M4 83 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 SNAPINO95295 136 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 TNFRSF6BO95407 300 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 NPYP01303 97 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 MT3P25713 68 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 CAMPP49913 170 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 RBX1P62877 108 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 COTL1Q14019 142 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 ELOBQ15370 118 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 NDUFA5Q16718 116 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 COX19Q49B96 90 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 ENHOQ6UWT2 76 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 ORMDL3Q8N138 153 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 TMEM243Q9BU79 118 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 TIMM21Q9BVV7 248 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 SMIM2Q9BVW6 85 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 ST20Q9HBF5 79 aa3.79□□□□□ -1.8
VPS36-202ENST00000462289 IGLV4-60A0A075B6I1 120 aa3.78□□□□□ -1.8
VPS36-202ENST00000462289 TRAV8-3A0A0A6YYJ7 113 aa3.78□□□□□ -1.8
VPS36-202ENST00000462289 SMKR1H3BMG3 65 aa3.78□□□□□ -1.8
VPS36-202ENST00000462289 K7EMI3 77 aa3.78□□□□□ -1.8
VPS36-202ENST00000462289 VCYO14598 125 aa3.78□□□□□ -1.8
VPS36-202ENST00000462289 TCAPO15273 167 aa3.78□□□□□ -1.8
VPS36-202ENST00000462289 HLA-DQA1P01909 254 aa3.78□□□□□ -1.8
VPS36-202ENST00000462289 MT-ND6P03923 174 aa3.78□□□□□ -1.8
VPS36-202ENST00000462289 ZNF25P17030 456 aaPredicted RBP3.78□□□□□ -1.8
VPS36-202ENST00000462289 KCNIP4Q6PIL6 250 aa3.78□□□□□ -1.8
VPS36-202ENST00000462289 Q8N976 141 aa3.78□□□□□ -1.8
VPS36-202ENST00000462289 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.78□□□□□ -1.8
VPS36-202ENST00000462289 HSPG2P98160 4391 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 A0A087WTM6 91 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 IGHV3-30P01768 117 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 IGHV3-33P01772 117 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 APOC3P02656 99 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 IGHV3-30-3P0DP02 117 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 IGHV3-30-5P0DP03 117 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 CKS2P33552 79 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 AMTP48728 403 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 Q0VG73 95 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 MIAQ16674 131 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 SLC7A5P1Q8MH63 180 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 PRELID3AQ96N28 172 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 ALKBH7Q9BT30 221 aaPredicted RBP3.77□□□□□ -1.81
VPS36-202ENST00000462289 UBE2D4Q9Y2X8 147 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 RYR1P21817 5038 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 HERC2O95714 4834 aa3.77□□□□□ -1.81
VPS36-202ENST00000462289 A0A087WX48 190 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 TRAV8-4A0A0B4J246 113 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 APCSP02743 223 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 FGF6P10767 208 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 MRPS36P82909 103 aaKnown RBP3.76□□□□□ -1.81
VPS36-202ENST00000462289 WFDC2Q14508 124 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 Q8N8P6 123 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 CHCHD5Q9BSY4 110 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 RPS10P5Q9NQ39 176 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 CDC42SE2Q9NRR3 84 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 KLK12Q9UKR0 248 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 PYGO1Q9Y3Y4 419 aa3.76□□□□□ -1.81
VPS36-202ENST00000462289 TGIF2-C20orf24A0A0A6YYL0 155 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 PMCHP20382 165 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 S100PP25815 95 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 REG3AQ06141 175 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 GAGE6Q13070 117 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 FAM19A3Q7Z5A8 133 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 LINC00269Q8N2A0 174 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 OR5A1Q8NGJ0 315 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 URB1-AS1Q96HZ7 61 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 KIR2DL4Q99706 377 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 URGCP-MRPS24S4R325 110 aa3.75□□□□□ -1.81
VPS36-202ENST00000462289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.74□□□□□ -1.81
VPS36-202ENST00000462289 A0A096LNJ9 63 aa3.74□□□□□ -1.81
VPS36-202ENST00000462289 IGKV2-29A2NJV5 120 aaPredicted RBP3.74□□□□□ -1.81
VPS36-202ENST00000462289 IGIPA6NJ69 53 aa3.74□□□□□ -1.81
VPS36-202ENST00000462289 COLCA2A8K830 154 aa3.74□□□□□ -1.81
VPS36-202ENST00000462289 CCL25O15444 150 aa3.74□□□□□ -1.81
VPS36-202ENST00000462289 ANGP03950 147 aaKnown RBP3.74□□□□□ -1.81
VPS36-202ENST00000462289 Q6ZSA8 131 aa3.74□□□□□ -1.81
VPS36-202ENST00000462289 Q8N814 137 aa3.74□□□□□ -1.81
VPS36-202ENST00000462289 UBE2WQ96B02 151 aa3.74□□□□□ -1.81
VPS36-202ENST00000462289 RMI2Q96E14 147 aa3.74□□□□□ -1.81
VPS36-202ENST00000462289 NXT2Q9NPJ8 142 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms