RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 NEXMIFQ5QGS0 1516 aa1.99□□□□□ -2.09
CCDC50-203ENST00000460064 NWD2Q9ULI1 1742 aa1.99□□□□□ -2.09
CCDC50-203ENST00000460064 CLTCQ00610 1675 aaKnown RBP1.99□□□□□ -2.09
CCDC50-203ENST00000460064 FN1P02751 2386 aaKnown RBP1.99□□□□□ -2.09
CCDC50-203ENST00000460064 PLXNA1Q9UIW2 1896 aa1.99□□□□□ -2.09
CCDC50-203ENST00000460064 MYO3AQ8NEV4 1616 aa1.99□□□□□ -2.09
CCDC50-203ENST00000460064 MYOFQ9NZM1 2061 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 KCPQ6ZWJ8 1503 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 LMTK2Q8IWU2 1503 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 DUOX2Q9NRD8 1548 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 TRBV25-1A0A075B6N4 114 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 C7orf77A4D0Y5 90 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 ACYP1P07311 99 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 SMIM11AP58511 58 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 ZNF56Q15929 161 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 DEFB132Q7Z7B7 95 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 C4orf3Q8WVX3 66 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 NDUFA4L2Q9NRX3 87 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 RP1P56715 2156 aa1.98□□□□□ -2.09
CCDC50-203ENST00000460064 ABCC1P33527 1531 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 TRBV6-7A0A0A0MS04 114 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 IGLV3-1P01715 115 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 IGHV3-30P01768 117 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 COX6CP09669 75 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 SMIM13P0DJ93 91 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 IGHV3-30-5P0DP03 117 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 TMEM170BQ5T4T1 132 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 EXPH5Q8NEV8 1989 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 SCN11AQ9UI33 1791 aa1.97□□□□□ -2.09
CCDC50-203ENST00000460064 HEATR1Q9H583 2144 aaKnown RBP1.96□□□□□ -2.1
CCDC50-203ENST00000460064 NHSL1Q5SYE7 1610 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 ALKQ9UM73 1620 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 KDM3BQ7LBC6 1761 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 A0A087WWC5 75 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 LOC101927531A0A1B0GV80 90 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 TRBV6-4A0A1B0GX49 114 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 IGKV2-29A2NJV5 120 aaPredicted RBP1.96□□□□□ -2.1
CCDC50-203ENST00000460064 FAM223BA6NKX1 122 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 F8WEM9 126 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 HMGN4O00479 90 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 C20orf197Q8N268 126 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 DYNLRB1Q9NP97 96 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 TMEM14BQ9NUH8 114 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 CTTNBP2Q8WZ74 1663 aa1.96□□□□□ -2.1
CCDC50-203ENST00000460064 DLG5Q8TDM6 1919 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 TRBV6-5A0A0K0K1A5 114 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 IQCF6A8MYZ5 107 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 UMAD1C9J7I0 102 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 PPYP01298 95 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 PRB1P04280 392 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 HMGN2P05204 90 aaKnown RBP1.95□□□□□ -2.1
CCDC50-203ENST00000460064 RNASE3P12724 160 aaKnown RBP1.95□□□□□ -2.1
CCDC50-203ENST00000460064 PDE6GP18545 87 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 ELOF1P60002 83 aaKnown RBP1.95□□□□□ -2.1
CCDC50-203ENST00000460064 ZGRF1Q86YA3 2104 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 PSENENQ9NZ42 101 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 LENEPQ9Y5L5 61 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 WIZO95785 1651 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 EFCAB5A4FU69 1503 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 RGPD2P0DJD1 1756 aa1.95□□□□□ -2.1
CCDC50-203ENST00000460064 NWD1Q149M9 1564 aa1.94□□□□□ -2.1
CCDC50-203ENST00000460064 ZNF142P52746 1687 aaPredicted RBP1.94□□□□□ -2.1
CCDC50-203ENST00000460064 IGKV3D-7A0A0C4DH55 119 aa1.94□□□□□ -2.1
CCDC50-203ENST00000460064 IGKV3OR2-268A0A0C4DH90 116 aa1.94□□□□□ -2.1
CCDC50-203ENST00000460064 SSBP1Q04837 148 aaKnown RBP1.94□□□□□ -2.1
CCDC50-203ENST00000460064 DEFB121Q5J5C9 76 aa1.94□□□□□ -2.1
CCDC50-203ENST00000460064 PROK2Q9HC23 129 aa1.94□□□□□ -2.1
CCDC50-203ENST00000460064 LRP6O75581 1613 aa1.94□□□□□ -2.1
CCDC50-203ENST00000460064 MED12LQ86YW9 2145 aa1.94□□□□□ -2.1
CCDC50-203ENST00000460064 CEP192Q8TEP8 1941 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 PREX2Q70Z35 1606 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 ABCA5Q8WWZ7 1642 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 RNF17Q9BXT8 1623 aaKnown RBP1.93□□□□□ -2.1
CCDC50-203ENST00000460064 ZNF815PA8K554 130 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 HIGD1CA8MV81 97 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 JMJD7-PLA2G4BH0Y9G9 81 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 PPP1R17O96001 155 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 C10orf55Q5SWW7 151 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 XAF1Q6GPH4 301 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 DEFB119Q8N690 84 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 LRRC9Q6ZRR7 1453 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 ARHGEF5Q12774 1597 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 DIP2CQ9Y2E4 1556 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 ARFGEF2Q9Y6D5 1785 aa1.93□□□□□ -2.1
CCDC50-203ENST00000460064 NRXN2Q9P2S2 1712 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 IGLV3-32A0A0A0MS00 114 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 MYMXA0A1B0GTQ4 84 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 CCL3L1P16619 93 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 SPAG11BQ08648 103 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 ESPL1Q14674 2120 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 PSMG4Q5JS54 123 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 SPAG11AQ6PDA7 123 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 ARL2-SNX15V9GYD0 113 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 V9GYH0 126 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 RGPD8O14715 1765 aaPredicted RBP1.92□□□□□ -2.1
CCDC50-203ENST00000460064 RGPD5Q99666 1765 aa1.92□□□□□ -2.1
CCDC50-203ENST00000460064 TOP2AP11388 1531 aaKnown RBP1.91□□□□□ -2.1
CCDC50-203ENST00000460064 EHBP1L1Q8N3D4 1523 aa1.91□□□□□ -2.1
CCDC50-203ENST00000460064 DOCK11Q5JSL3 2073 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms