RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 TCL1BO95988 128 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 AZU1P20160 251 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 HERV-K104P63124 156 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 Q1RN00 199 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 MUSTN1Q8IVN3 82 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 C16orf74Q96GX8 76 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 OPRPNQ99935 248 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-202ENST00000459727 GTSF1LQ9H1H1 148 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 F8P00451 2351 aa6.41□□□□□ -1.38
HDAC3-202ENST00000459727 ODF3L2Q3SX64 289 aa6.4□□□□□ -1.38
HDAC3-202ENST00000459727 SFTA2Q6UW10 78 aa6.4□□□□□ -1.38
HDAC3-202ENST00000459727 C18orf65Q6ZTR6 163 aa6.4□□□□□ -1.38
HDAC3-202ENST00000459727 Q6ZUT4 128 aa6.4□□□□□ -1.38
HDAC3-202ENST00000459727 SH2D6Q7Z4S9 175 aa6.4□□□□□ -1.38
HDAC3-202ENST00000459727 ZNF418Q8TF45 676 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-202ENST00000459727 NIPBLQ6KC79 2804 aaeCLIP6.4□□□□□ -1.38
HDAC3-202ENST00000459727 TACC2O95359 2948 aa6.4□□□□□ -1.39
HDAC3-202ENST00000459727 TRGV1A0A0A0MS02 117 aa6.39□□□□□ -1.39
HDAC3-202ENST00000459727 H3BT86 120 aa6.39□□□□□ -1.39
HDAC3-202ENST00000459727 SLC25A20O43772 301 aa6.39□□□□□ -1.39
HDAC3-202ENST00000459727 RNASE1P07998 156 aaKnown RBP6.39□□□□□ -1.39
HDAC3-202ENST00000459727 KRTAP1-3Q8IUG1 177 aa6.39□□□□□ -1.39
HDAC3-202ENST00000459727 TMEM101Q96IK0 257 aa6.39□□□□□ -1.39
HDAC3-202ENST00000459727 LITAFQ99732 161 aa6.39□□□□□ -1.39
HDAC3-202ENST00000459727 IGHV3-64A0A075B6Q5 118 aa6.38□□□□□ -1.39
HDAC3-202ENST00000459727 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-202ENST00000459727 IGLV5-39A0A0G2JS06 123 aa6.38□□□□□ -1.39
HDAC3-202ENST00000459727 A0A1B0GV72 72 aa6.38□□□□□ -1.39
HDAC3-202ENST00000459727 TRBV6-4A0A1B0GX49 114 aa6.38□□□□□ -1.39
HDAC3-202ENST00000459727 IGKV2-29A2NJV5 120 aaPredicted RBP6.38□□□□□ -1.39
HDAC3-202ENST00000459727 UBE2L6O14933 153 aa6.38□□□□□ -1.39
HDAC3-202ENST00000459727 PRSS2P07478 247 aa6.38□□□□□ -1.39
HDAC3-202ENST00000459727 PROK1P58294 105 aa6.38□□□□□ -1.39
HDAC3-202ENST00000459727 C1orf158Q8N1D5 194 aa6.38□□□□□ -1.39
HDAC3-202ENST00000459727 XCL2Q9UBD3 114 aa6.38□□□□□ -1.39
HDAC3-202ENST00000459727 MED13LQ71F56 2210 aa6.38□□□□□ -1.39
HDAC3-202ENST00000459727 ZNF469Q96JG9 3925 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-202ENST00000459727 TRBV10-2A0A0K0K1G8 114 aa6.37□□□□□ -1.39
HDAC3-202ENST00000459727 NDUFA7O95182 113 aa6.37□□□□□ -1.39
HDAC3-202ENST00000459727 RPL13AP40429 203 aaKnown RBP6.37□□□□□ -1.39
HDAC3-202ENST00000459727 SMCPP49901 116 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-202ENST00000459727 LINC01620Q4KN68 170 aa6.37□□□□□ -1.39
HDAC3-202ENST00000459727 Q6ZSN1 163 aa6.37□□□□□ -1.39
HDAC3-202ENST00000459727 ANKRD29Q8N6D5 301 aa6.37□□□□□ -1.39
HDAC3-202ENST00000459727 DEFB104AQ8WTQ1 72 aa6.37□□□□□ -1.39
HDAC3-202ENST00000459727 FAM104AQ969W3 186 aa6.37□□□□□ -1.39
HDAC3-202ENST00000459727 TMEM243Q9BU79 118 aa6.37□□□□□ -1.39
HDAC3-202ENST00000459727 ICOSQ9Y6W8 199 aa6.37□□□□□ -1.39
HDAC3-202ENST00000459727 AKAP6Q13023 2319 aa6.36□□□□□ -1.39
HDAC3-202ENST00000459727 TRAV8-3A0A0A6YYJ7 113 aa6.36□□□□□ -1.39
HDAC3-202ENST00000459727 C9JAW5 83 aa6.36□□□□□ -1.39
HDAC3-202ENST00000459727 SPINK8P0C7L1 97 aa6.36□□□□□ -1.39
HDAC3-202ENST00000459727 KRTAP10-9P60411 292 aa6.36□□□□□ -1.39
HDAC3-202ENST00000459727 KRTAP21-3Q3LHN1 58 aa6.36□□□□□ -1.39
HDAC3-202ENST00000459727 OVOL2Q9BRP0 275 aa6.36□□□□□ -1.39
HDAC3-202ENST00000459727 SPG11Q96JI7 2443 aa6.36□□□□□ -1.39
HDAC3-202ENST00000459727 IGLV1-51P01701 117 aa6.35□□□□□ -1.39
HDAC3-202ENST00000459727 PF4P02776 101 aa6.35□□□□□ -1.39
HDAC3-202ENST00000459727 CDKN2A-AS1Q9UH64 79 aa6.35□□□□□ -1.39
HDAC3-202ENST00000459727 AGRNO00468 2067 aa6.34□□□□□ -1.39
HDAC3-202ENST00000459727 CR1P17927 2039 aa6.34□□□□□ -1.39
HDAC3-202ENST00000459727 TRGV2A0A075B6R0 118 aa6.34□□□□□ -1.39
HDAC3-202ENST00000459727 IGHV3OR16-12A0A075B7B8 117 aa6.34□□□□□ -1.39
HDAC3-202ENST00000459727 IGHV3-38A0A0C4DH36 116 aa6.34□□□□□ -1.39
HDAC3-202ENST00000459727 ADARB2-AS1A8MUL3 147 aa6.34□□□□□ -1.39
HDAC3-202ENST00000459727 TRIAP1O43715 76 aa6.34□□□□□ -1.39
HDAC3-202ENST00000459727 LINC00242Q5T6M2 205 aa6.34□□□□□ -1.39
HDAC3-202ENST00000459727 FAM222AQ5U5X8 452 aa6.34□□□□□ -1.39
HDAC3-202ENST00000459727 CEMP1Q6PRD7 247 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-202ENST00000459727 DCHS2Q6V1P9 2916 aa6.34□□□□□ -1.39
HDAC3-202ENST00000459727 FAM240AA0A1B0GVK7 77 aa6.33□□□□□ -1.4
HDAC3-202ENST00000459727 SMIM1B2RUZ4 78 aa6.33□□□□□ -1.4
HDAC3-202ENST00000459727 H7C2G1 150 aa6.33□□□□□ -1.4
HDAC3-202ENST00000459727 MRPL23Q16540 153 aaKnown RBP6.33□□□□□ -1.4
HDAC3-202ENST00000459727 RNASE13Q5GAN3 156 aaKnown RBP6.33□□□□□ -1.4
HDAC3-202ENST00000459727 LINC01006Q8NI28 216 aa6.33□□□□□ -1.4
HDAC3-202ENST00000459727 UBE2WQ96B02 151 aa6.33□□□□□ -1.4
HDAC3-202ENST00000459727 CARD19Q96LW7 228 aa6.33□□□□□ -1.4
HDAC3-202ENST00000459727 CITED2Q99967 270 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-202ENST00000459727 Q9H8V8 135 aa6.33□□□□□ -1.4
HDAC3-202ENST00000459727 CDC42SE2Q9NRR3 84 aa6.33□□□□□ -1.4
HDAC3-202ENST00000459727 TRGV4A0A0C4DH28 118 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 A0A1W2PRX2 142 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 GAGE12JA6NER3 117 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 LST1O00453 97 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 HILS1P60008 231 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 GAGE4Q13068 117 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 GAGE5Q13069 117 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 MEIG1Q5JSS6 88 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 Q6ZTI0 123 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 PRIMA1Q86XR5 153 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 WFDC11Q8NEX6 87 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 LINC00308Q8TCZ7 52 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 CDIP1Q9H305 208 aa6.32□□□□□ -1.4
HDAC3-202ENST00000459727 NOP10Q9NPE3 64 aaKnown RBP6.32□□□□□ -1.4
HDAC3-202ENST00000459727 TRAV26-1A0A087WT03 109 aa6.31□□□□□ -1.4
HDAC3-202ENST00000459727 TRAV13-2A0A0B4J235 113 aa6.31□□□□□ -1.4
HDAC3-202ENST00000459727 SMIM9A6NGZ8 99 aa6.31□□□□□ -1.4
HDAC3-202ENST00000459727 INSL3P51460 131 aa6.31□□□□□ -1.4
HDAC3-202ENST00000459727 ADAMTSL4-AS1Q5T5F5 129 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms