RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 RPS29P62273 56 aaKnown RBP-0.72□□□□□ -2.52
SCARNA18-201ENST00000459004 TFAMQ00059 246 aaKnown RBP-0.72□□□□□ -2.52
SCARNA18-201ENST00000459004 DEFB112Q30KQ8 113 aa-0.72□□□□□ -2.52
SCARNA18-201ENST00000459004 PPP1R2P3Q6NXS1 205 aa-0.72□□□□□ -2.52
SCARNA18-201ENST00000459004 CENPHQ9H3R5 247 aa-0.72□□□□□ -2.52
SCARNA18-201ENST00000459004 HLA-DRB4X5D2U9 266 aa-0.72□□□□□ -2.52
SCARNA18-201ENST00000459004 GOLGA3Q08378 1498 aa-0.73□□□□□ -2.53
SCARNA18-201ENST00000459004 J3KT08 172 aa-0.73□□□□□ -2.53
SCARNA18-201ENST00000459004 DEGS1O15121 323 aa-0.73□□□□□ -2.53
SCARNA18-201ENST00000459004 SMIM24O75264 130 aa-0.73□□□□□ -2.53
SCARNA18-201ENST00000459004 WFDC2Q14508 124 aa-0.73□□□□□ -2.53
SCARNA18-201ENST00000459004 Q5VV11 94 aa-0.73□□□□□ -2.53
SCARNA18-201ENST00000459004 SSBP3-AS1Q7Z2R9 100 aa-0.73□□□□□ -2.53
SCARNA18-201ENST00000459004 CNFNQ9BYD5 112 aa-0.73□□□□□ -2.53
SCARNA18-201ENST00000459004 BANF2Q9H503 90 aa-0.73□□□□□ -2.53
SCARNA18-201ENST00000459004 BATF3Q9NR55 127 aa-0.73□□□□□ -2.53
SCARNA18-201ENST00000459004 USF3Q68DE3 2245 aa-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 J3QLW9 94 aa-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 M0R3E3 92 aa-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 TNFP01375 233 aa-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 MT-ND4LP03901 98 aa-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 S100GP29377 79 aa-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 RPS28P62857 69 aaKnown RBP-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 DEFB109BQ30KR1 87 aa-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 MAGOHBQ96A72 148 aaKnown RBP-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 PRO0255Q9UI72 69 aa-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 V9GYQ6 96 aa-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 FYCO1Q9BQS8 1478 aa-0.74□□□□□ -2.53
SCARNA18-201ENST00000459004 SIPA1L3O60292 1781 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA18-201ENST00000459004 TRGV1A0A0A0MS02 117 aa-0.75□□□□□ -2.53
SCARNA18-201ENST00000459004 TRAV12-3A0A0B4J271 114 aa-0.75□□□□□ -2.53
SCARNA18-201ENST00000459004 A0A0D9SFI3 127 aa-0.75□□□□□ -2.53
SCARNA18-201ENST00000459004 M0R2T5 61 aa-0.75□□□□□ -2.53
SCARNA18-201ENST00000459004 DEFB4AO15263 64 aa-0.75□□□□□ -2.53
SCARNA18-201ENST00000459004 ATP11AUNQ6ZP68 121 aa-0.75□□□□□ -2.53
SCARNA18-201ENST00000459004 SKA2Q8WVK7 121 aaPredicted RBP-0.75□□□□□ -2.53
SCARNA18-201ENST00000459004 NKTRP30414 1462 aaKnown RBP-0.75□□□□□ -2.53
SCARNA18-201ENST00000459004 PARP14Q460N5 1801 aa-0.75□□□□□ -2.53
SCARNA18-201ENST00000459004 FABP1P07148 127 aa-0.76□□□□□ -2.53
SCARNA18-201ENST00000459004 ADGRB1O14514 1584 aa-0.76□□□□□ -2.53
SCARNA18-201ENST00000459004 BICRAQ9NZM4 1560 aa-0.77□□□□□ -2.53
SCARNA18-201ENST00000459004 TRAV36DV7A0A075B6V5 113 aa-0.77□□□□□ -2.53
SCARNA18-201ENST00000459004 SPAARA0A1B0GVQ0 90 aa-0.77□□□□□ -2.53
SCARNA18-201ENST00000459004 SPINK8P0C7L1 97 aa-0.77□□□□□ -2.53
SCARNA18-201ENST00000459004 CLLU1Q5K131 121 aa-0.77□□□□□ -2.53
SCARNA18-201ENST00000459004 TMEM244Q5VVB8 128 aa-0.77□□□□□ -2.53
SCARNA18-201ENST00000459004 DDA1Q9BW61 102 aa-0.77□□□□□ -2.53
SCARNA18-201ENST00000459004 AGPAT4-IT1Q9H0P7 198 aa-0.77□□□□□ -2.53
SCARNA18-201ENST00000459004 KNDC1Q76NI1 1749 aa-0.78□□□□□ -2.53
SCARNA18-201ENST00000459004 TRBV10-3A0A0K0K1G6 114 aa-0.78□□□□□ -2.53
SCARNA18-201ENST00000459004 A0A1B0GX51 115 aa-0.78□□□□□ -2.53
SCARNA18-201ENST00000459004 G3V318 75 aa-0.78□□□□□ -2.53
SCARNA18-201ENST00000459004 M0R2P5 195 aa-0.78□□□□□ -2.53
SCARNA18-201ENST00000459004 SCTP09683 121 aa-0.78□□□□□ -2.53
SCARNA18-201ENST00000459004 S4R3F8 94 aa-0.78□□□□□ -2.53
SCARNA18-201ENST00000459004 PTPN23Q9H3S7 1636 aa-0.78□□□□□ -2.54
SCARNA18-201ENST00000459004 ADAMTS12P58397 1594 aa-0.79□□□□□ -2.54
SCARNA18-201ENST00000459004 ARHGEF5Q12774 1597 aa-0.79□□□□□ -2.54
SCARNA18-201ENST00000459004 BCL9LQ86UU0 1499 aa-0.79□□□□□ -2.54
SCARNA18-201ENST00000459004 MBD5Q9P267 1494 aa-0.79□□□□□ -2.54
SCARNA18-201ENST00000459004 MYH9P35579 1960 aaKnown RBP-0.79□□□□□ -2.54
SCARNA18-201ENST00000459004 TSC2P49815 1807 aa-0.79□□□□□ -2.54
SCARNA18-201ENST00000459004 ARFGEF1Q9Y6D6 1849 aa-0.79□□□□□ -2.54
SCARNA18-201ENST00000459004 TCTE3Q8IZS6 198 aa-0.79□□□□□ -2.54
SCARNA18-201ENST00000459004 TIAM2Q8IVF5 1701 aa-0.79□□□□□ -2.54
SCARNA18-201ENST00000459004 CICQ96RK0 1608 aaPredicted RBP-0.79□□□□□ -2.54
SCARNA18-201ENST00000459004 TROQ12816 1431 aaPredicted RBP-0.8□□□□□ -2.54
SCARNA18-201ENST00000459004 MUC22E2RYF6 1773 aaPredicted RBP-0.8□□□□□ -2.54
SCARNA18-201ENST00000459004 TSTD3H0UI37 97 aa-0.8□□□□□ -2.54
SCARNA18-201ENST00000459004 PIN1P1O15428 100 aa-0.8□□□□□ -2.54
SCARNA18-201ENST00000459004 TNFSF15O95150 251 aa-0.8□□□□□ -2.54
SCARNA18-201ENST00000459004 SPAG11BQ08648 103 aa-0.8□□□□□ -2.54
SCARNA18-201ENST00000459004 LSM2Q9Y333 95 aaKnown RBP-0.8□□□□□ -2.54
SCARNA18-201ENST00000459004 ERCC6Q03468 1493 aa-0.8□□□□□ -2.54
SCARNA18-201ENST00000459004 LINC00959A0A1B0GUT2 108 aa-0.81□□□□□ -2.54
SCARNA18-201ENST00000459004 C9orf92A6NGG3 77 aa-0.81□□□□□ -2.54
SCARNA18-201ENST00000459004 EDDM3BP56851 147 aa-0.81□□□□□ -2.54
SCARNA18-201ENST00000459004 HIGD1AQ9Y241 93 aa-0.81□□□□□ -2.54
SCARNA18-201ENST00000459004 HSPB11Q9Y547 144 aa-0.81□□□□□ -2.54
SCARNA18-201ENST00000459004 CDC42BPAQ5VT25 1732 aa-0.81□□□□□ -2.54
SCARNA18-201ENST00000459004 PPIP5K1Q6PFW1 1433 aa-0.81□□□□□ -2.54
SCARNA18-201ENST00000459004 CASKIN1Q8WXD9 1431 aa-0.81□□□□□ -2.54
SCARNA18-201ENST00000459004 PAPPA2Q9BXP8 1791 aa-0.82□□□□□ -2.54
SCARNA18-201ENST00000459004 TRAV1-2A0A0B4J238 106 aa-0.82□□□□□ -2.54
SCARNA18-201ENST00000459004 CMPK1P30085 196 aa-0.82□□□□□ -2.54
SCARNA18-201ENST00000459004 LINC01545Q5VT33 79 aa-0.82□□□□□ -2.54
SCARNA18-201ENST00000459004 WFDC6Q9BQY6 131 aa-0.82□□□□□ -2.54
SCARNA18-201ENST00000459004 NDUFA12Q9UI09 145 aa-0.82□□□□□ -2.54
SCARNA18-201ENST00000459004 GINS2Q9Y248 185 aa-0.82□□□□□ -2.54
SCARNA18-201ENST00000459004 IFT172Q9UG01 1749 aa-0.82□□□□□ -2.54
SCARNA18-201ENST00000459004 TET3O43151 1660 aa-0.82□□□□□ -2.54
SCARNA18-201ENST00000459004 DOCK11Q5JSL3 2073 aa-0.82□□□□□ -2.54
SCARNA18-201ENST00000459004 IBTKQ9P2D0 1353 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA18-201ENST00000459004 MAP3K1Q13233 1512 aa-0.83□□□□□ -2.54
SCARNA18-201ENST00000459004 TRAV22A0A0B4J277 110 aa-0.83□□□□□ -2.54
SCARNA18-201ENST00000459004 H3BNG1 76 aa-0.83□□□□□ -2.54
SCARNA18-201ENST00000459004 SPRR1AP35321 89 aa-0.83□□□□□ -2.54
SCARNA18-201ENST00000459004 DEFB135Q30KP9 77 aa-0.83□□□□□ -2.54
SCARNA18-201ENST00000459004 SMIM15Q7Z3B0 74 aa-0.83□□□□□ -2.54
SCARNA18-201ENST00000459004 PRDM2Q13029 1718 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms