RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 PSMG4Q5JS54 123 aa2.28□□□□□ -2.04
HMGB3P30-201ENST00000457863 Q6ZTI0 123 aa2.28□□□□□ -2.04
HMGB3P30-201ENST00000457863 TMEM14BQ9NUH8 114 aa2.28□□□□□ -2.04
HMGB3P30-201ENST00000457863 LENEPQ9Y5L5 61 aa2.28□□□□□ -2.04
HMGB3P30-201ENST00000457863 SHROOM3Q8TF72 1996 aa2.28□□□□□ -2.04
HMGB3P30-201ENST00000457863 CEP192Q8TEP8 1941 aa2.28□□□□□ -2.04
HMGB3P30-201ENST00000457863 ZFHX2Q9C0A1 2572 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P30-201ENST00000457863 NUP188Q5SRE5 1749 aa2.28□□□□□ -2.05
HMGB3P30-201ENST00000457863 NHSQ6T4R5 1651 aa2.28□□□□□ -2.05
HMGB3P30-201ENST00000457863 CD163L1Q9NR16 1453 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 NOTCH2Q04721 2471 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 IGKV3-7A0A075B6H7 116 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 IGLV3-32A0A0A0MS00 114 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 A0A1W2PNU3 283 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 FAM223BA6NKX1 122 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 HMGN4O00479 90 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 PLGLAQ15195 96 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 LY6EQ16553 131 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 SMIM5Q71RC9 77 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 PATE1Q8WXA2 126 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 MRPL36Q9P0J6 103 aaKnown RBP2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 ORMDL1Q9P0S3 153 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 MYO7BQ6PIF6 2116 aa2.27□□□□□ -2.05
HMGB3P30-201ENST00000457863 TNRC6BQ9UPQ9 1833 aaKnown RBP2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 COL14A1Q05707 1796 aaKnown RBP2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 SHPRHQ149N8 1683 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 TRAV40A0A0B4J280 105 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 A0A0J9YY99 117 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 ZNF815PA8K554 130 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 HIGD1CA8MV81 97 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 C10orf142B7Z368 130 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 FXYD1O00168 92 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 HRES1P13985 223 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 GCHFRP30047 84 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 DSCR10P59022 87 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 SPINK14Q6IE38 97 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 C6orf201Q7Z4U5 140 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 C4orf3Q8WVX3 66 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 PSENENQ9NZ42 101 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 CCL26Q9Y258 94 aa2.26□□□□□ -2.05
HMGB3P30-201ENST00000457863 COL4A1P02462 1669 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 RREB1Q92766 1687 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 KIAA0556O60303 1618 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 USP32Q8NFA0 1604 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 A0A1B0GWA3 101 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 C3orf79P0CE67 100 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 SAA2P0DJI9 122 aaPredicted RBP2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 Q6JHZ5 121 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 HILPDAQ9Y5L2 63 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 BRWD1Q9NSI6 2320 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 MRC1P22897 1456 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 TIAM2Q8IVF5 1701 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 MYO7AQ13402 2215 aa2.25□□□□□ -2.05
HMGB3P30-201ENST00000457863 UBR3Q6ZT12 1888 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 VWDEQ8N2E2 1590 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 PRRC2BQ5JSZ5 2229 aaKnown RBP2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 TRBV6-8A0A0A6YYG3 113 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 LOC285095A0A1B0GVY8 99 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 CEBPZOSA8MTT3 80 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 IGHV3-30P01768 117 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 IGHV3-30-5P0DP03 117 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 PYDC2Q56P42 97 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 PROK2Q9HC23 129 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 V9GYH0 126 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 ARFGEF3Q5TH69 2177 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 TET1Q8NFU7 2136 aa2.24□□□□□ -2.05
HMGB3P30-201ENST00000457863 UNC13CQ8NB66 2214 aa2.23□□□□□ -2.05
HMGB3P30-201ENST00000457863 TPRXLQ17RH7 258 aa2.23□□□□□ -2.05
HMGB3P30-201ENST00000457863 ATP5EP2Q5VTU8 51 aa2.23□□□□□ -2.05
HMGB3P30-201ENST00000457863 Q86TA4 180 aa2.23□□□□□ -2.05
HMGB3P30-201ENST00000457863 SPAG17Q6Q759 2223 aa2.23□□□□□ -2.05
HMGB3P30-201ENST00000457863 BIVM-ERCC5R4GMW8 1640 aa2.23□□□□□ -2.05
HMGB3P30-201ENST00000457863 BCORQ6W2J9 1755 aa2.23□□□□□ -2.05
HMGB3P30-201ENST00000457863 ZNF236Q9UL36 1845 aa2.22□□□□□ -2.05
HMGB3P30-201ENST00000457863 PCDH15Q96QU1 1955 aa2.22□□□□□ -2.05
HMGB3P30-201ENST00000457863 EIF2AK4Q9P2K8 1649 aaKnown RBP2.22□□□□□ -2.05
HMGB3P30-201ENST00000457863 IGKV1-17P01599 117 aa2.22□□□□□ -2.05
HMGB3P30-201ENST00000457863 CCL3L1P16619 93 aa2.22□□□□□ -2.05
HMGB3P30-201ENST00000457863 SSBP1Q04837 148 aaKnown RBP2.22□□□□□ -2.05
HMGB3P30-201ENST00000457863 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
HMGB3P30-201ENST00000457863 SPACA4Q8TDM5 124 aa2.22□□□□□ -2.05
HMGB3P30-201ENST00000457863 AMELXQ99217 191 aa2.22□□□□□ -2.05
HMGB3P30-201ENST00000457863 ABCA5Q8WWZ7 1642 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 MDC1Q14676 2089 aaKnown RBP2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 A0A0G2JQZ4 141 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 TRBV6-4A0A1B0GX49 114 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 PPP1R17O96001 155 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 PPYP01298 95 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 IGKV3-15P01624 115 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 IGLV3-1P01715 115 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 COL4A2P08572 1712 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 ARMS2P0C7Q2 107 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 PDE6GP18545 87 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 DEFB134Q4QY38 66 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 UBE2D4Q9Y2X8 147 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 ARL2-SNX15V9GYD0 113 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 ABCA4P78363 2273 aa2.21□□□□□ -2.06
HMGB3P30-201ENST00000457863 ANKRD36CQ5JPF3 1778 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms