RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 DAZ4Q86SG3 579 aaKnown RBP9.73□□□□□ -0.85
CLK3-203ENST00000454830 CHCHD5Q9BSY4 110 aa9.73□□□□□ -0.85
CLK3-203ENST00000454830 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
CLK3-203ENST00000454830 DAZ3Q9NR90 486 aaKnown RBP9.73□□□□□ -0.85
CLK3-203ENST00000454830 PYGO1Q9Y3Y4 419 aa9.73□□□□□ -0.85
CLK3-203ENST00000454830 LINC00694P0DN24 101 aa9.73□□□□□ -0.85
CLK3-203ENST00000454830 GAGE6Q13070 117 aa9.73□□□□□ -0.85
CLK3-203ENST00000454830 UBE2V1Q13404 147 aa9.73□□□□□ -0.85
CLK3-203ENST00000454830 OR5A1Q8NGJ0 315 aa9.73□□□□□ -0.85
CLK3-203ENST00000454830 H3BRM9 83 aa9.72□□□□□ -0.85
CLK3-203ENST00000454830 CCL25O15444 150 aa9.72□□□□□ -0.85
CLK3-203ENST00000454830 OXLD1Q5BKU9 147 aa9.72□□□□□ -0.85
CLK3-203ENST00000454830 GAGE10A6NGK3 116 aa9.72□□□□□ -0.85
CLK3-203ENST00000454830 APOMO95445 188 aa9.72□□□□□ -0.85
CLK3-203ENST00000454830 APOC4P55056 127 aa9.72□□□□□ -0.85
CLK3-203ENST00000454830 TMEM243Q9BU79 118 aa9.72□□□□□ -0.85
CLK3-203ENST00000454830 FAM222AQ5U5X8 452 aa9.72□□□□□ -0.85
CLK3-203ENST00000454830 NFE4Q86UQ8 179 aa9.72□□□□□ -0.85
CLK3-203ENST00000454830 TMEM101Q96IK0 257 aa9.72□□□□□ -0.85
CLK3-203ENST00000454830 UBE2D3P61077 147 aa9.71□□□□□ -0.85
CLK3-203ENST00000454830 UBE2D2P62837 147 aa9.71□□□□□ -0.85
CLK3-203ENST00000454830 COL6A5A8TX70 2615 aa9.71□□□□□ -0.85
CLK3-203ENST00000454830 SFTA2Q6UW10 78 aa9.71□□□□□ -0.85
CLK3-203ENST00000454830 TMEM223A0PJW6 202 aa9.71□□□□□ -0.86
CLK3-203ENST00000454830 A8MZ25 164 aa9.71□□□□□ -0.86
CLK3-203ENST00000454830 OVOL2Q9BRP0 275 aa9.71□□□□□ -0.86
CLK3-203ENST00000454830 A0A0J9YY99 117 aa9.7□□□□□ -0.86
CLK3-203ENST00000454830 C9orf118A6NHY6 69 aa9.7□□□□□ -0.86
CLK3-203ENST00000454830 TMEM262E9PQX1 116 aa9.7□□□□□ -0.86
CLK3-203ENST00000454830 PRSS2P07478 247 aa9.7□□□□□ -0.86
CLK3-203ENST00000454830 NTM-AS1Q6ZSK4 140 aa9.7□□□□□ -0.86
CLK3-203ENST00000454830 GYPEP15421 78 aa9.7□□□□□ -0.86
CLK3-203ENST00000454830 LEPROTO15243 131 aa9.7□□□□□ -0.86
CLK3-203ENST00000454830 AMELXQ99217 191 aa9.7□□□□□ -0.86
CLK3-203ENST00000454830 FHL2Q14192 279 aa9.69□□□□□ -0.86
CLK3-203ENST00000454830 TRBV6-4A0A1B0GX49 114 aa9.69□□□□□ -0.86
CLK3-203ENST00000454830 FABP2P12104 132 aa9.69□□□□□ -0.86
CLK3-203ENST00000454830 SAMD5Q5TGI4 173 aa9.69□□□□□ -0.86
CLK3-203ENST00000454830 IGHV3-30-3P0DP02 117 aa9.69□□□□□ -0.86
CLK3-203ENST00000454830 CDKN2A-AS1Q9UH64 79 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 X6R8D5 127 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 DAD1P61803 113 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 TAL2Q16559 108 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 C12orf74Q32Q52 190 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 KRTAP24-1Q3LI83 254 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 TM2D2Q9BX73 214 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 NOTCH1P46531 2555 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 A6NJY4 79 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 SPCS1Q9Y6A9 102 aa9.68□□□□□ -0.86
CLK3-203ENST00000454830 A0A0U1RRA0 63 aa9.67□□□□□ -0.86
CLK3-203ENST00000454830 IGHV4-30-4P0DP06 118 aa9.67□□□□□ -0.86
CLK3-203ENST00000454830 NPC2P61916 151 aa9.67□□□□□ -0.86
CLK3-203ENST00000454830 MRPS36P82909 103 aaKnown RBP9.67□□□□□ -0.86
CLK3-203ENST00000454830 SMAGPQ0VAQ4 97 aa9.67□□□□□ -0.86
CLK3-203ENST00000454830 GTF2H5Q6ZYL4 71 aa9.67□□□□□ -0.86
CLK3-203ENST00000454830 TRRAPQ9Y4A5 3859 aa9.67□□□□□ -0.86
CLK3-203ENST00000454830 C21orf62-AS1Q17RA5 79 aa9.67□□□□□ -0.86
CLK3-203ENST00000454830 IGHV4-28A0A0C4DH34 117 aa9.67□□□□□ -0.86
CLK3-203ENST00000454830 ZNF625Q96I27 306 aaPredicted RBP9.67□□□□□ -0.86
CLK3-203ENST00000454830 NDUFA12Q9UI09 145 aa9.67□□□□□ -0.86
CLK3-203ENST00000454830 FAM104AQ969W3 186 aa9.66□□□□□ -0.86
CLK3-203ENST00000454830 H7C2G1 150 aa9.66□□□□□ -0.86
CLK3-203ENST00000454830 PAX4O43316 350 aa9.66□□□□□ -0.86
CLK3-203ENST00000454830 TINCRA0A1B0GVN0 87 aa9.66□□□□□ -0.86
CLK3-203ENST00000454830 F5H768 121 aa9.66□□□□□ -0.86
CLK3-203ENST00000454830 SMIM9A6NGZ8 99 aa9.65□□□□□ -0.86
CLK3-203ENST00000454830 UBE2D1P51668 147 aa9.65□□□□□ -0.86
CLK3-203ENST00000454830 CRYBA4P53673 196 aa9.65□□□□□ -0.86
CLK3-203ENST00000454830 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
CLK3-203ENST00000454830 A0A1W2PPM0 123 aa9.65□□□□□ -0.87
CLK3-203ENST00000454830 IGHV1-58A0A0C4DH39 117 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 COX6A2Q02221 97 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 KIR2DL5BQ8NHK3 375 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 LOC107984156A0A0G2JMH3 177 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 CIDEAO60543 219 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 ARL17AQ8IVW1 177 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 TOMM7Q9P0U1 55 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 CLPSL2Q6UWE3 100 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 VSIG2Q96IQ7 327 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 PGPEP1Q9NXJ5 209 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 PRO0255Q9UI72 69 aa9.64□□□□□ -0.87
CLK3-203ENST00000454830 TRBV6-8A0A0A6YYG3 113 aa9.63□□□□□ -0.87
CLK3-203ENST00000454830 HERVK_113P63121 156 aa9.63□□□□□ -0.87
CLK3-203ENST00000454830 WFDC9Q8NEX5 89 aa9.63□□□□□ -0.87
CLK3-203ENST00000454830 TMEM238C9JI98 176 aa9.62□□□□□ -0.87
CLK3-203ENST00000454830 CDC42SE2Q9NRR3 84 aa9.62□□□□□ -0.87
CLK3-203ENST00000454830 LINC00242Q5T6M2 205 aa9.62□□□□□ -0.87
CLK3-203ENST00000454830 IGLL5B9A064 214 aa9.62□□□□□ -0.87
CLK3-203ENST00000454830 C10orf126Q8N4M7 172 aa9.62□□□□□ -0.87
CLK3-203ENST00000454830 A0A0J9YXY3 114 aa9.61□□□□□ -0.87
CLK3-203ENST00000454830 Q1RN00 199 aa9.61□□□□□ -0.87
CLK3-203ENST00000454830 LYRM9A8MSI8 78 aa9.61□□□□□ -0.87
CLK3-203ENST00000454830 CELA1Q9UNI1 258 aa9.61□□□□□ -0.87
CLK3-203ENST00000454830 TRAV26-1A0A087WT03 109 aa9.61□□□□□ -0.87
CLK3-203ENST00000454830 DAND5Q8N907 189 aa9.61□□□□□ -0.87
CLK3-203ENST00000454830 RETNQ9HD89 108 aa9.61□□□□□ -0.87
CLK3-203ENST00000454830 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
CLK3-203ENST00000454830 MEIG1Q5JSS6 88 aa9.6□□□□□ -0.87
CLK3-203ENST00000454830 K7EP34 96 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms