RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 JPT2Q9H910 190 aa4.34□□□□□ -1.71
MSH6-205ENST00000454137 SPANXB1Q9NS25 103 aaPredicted RBP4.34□□□□□ -1.71
MSH6-205ENST00000454137 XCL2Q9UBD3 114 aa4.34□□□□□ -1.71
MSH6-205ENST00000454137 PKD1L1Q8TDX9 2849 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 NACAE9PAV3 2078 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 TRRAPQ9Y4A5 3859 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 TEX48A0A1B0GUV7 120 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 M0QY20 66 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 PRM2P04554 102 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 HTN1P15515 57 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 UBE2D1P51668 147 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 RPL24P83731 157 aaKnown RBP4.33□□□□□ -1.72
MSH6-205ENST00000454137 ZNF56Q15929 161 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 ZNF876PQ49A33 203 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 NFE4Q86UQ8 179 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 PRO0461Q9UI25 63 aa4.33□□□□□ -1.72
MSH6-205ENST00000454137 ANK2Q01484 3957 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 A0A0J9YY99 117 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 PLAC8L1A1L4L8 177 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 RS1O15537 224 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 SCGB1A1P11684 91 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 RPL35AP18077 110 aaKnown RBP4.32□□□□□ -1.72
MSH6-205ENST00000454137 AZU1P20160 251 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 SRSF9Q13242 221 aaKnown RBP eCLIP4.32□□□□□ -1.72
MSH6-205ENST00000454137 KRTAP21-3Q3LHN1 58 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 KPRPQ5T749 579 aaPredicted RBP4.32□□□□□ -1.72
MSH6-205ENST00000454137 Q6ZSN1 163 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 LINC00612Q8N6U2 182 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 ATP6V0E2Q8NHE4 81 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 PLEKHB2Q96CS7 222 aa4.32□□□□□ -1.72
MSH6-205ENST00000454137 MRPL16Q9NX20 251 aaKnown RBP4.32□□□□□ -1.72
MSH6-205ENST00000454137 TRAV4A0A0B4J268 109 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 LYRM9A8MSI8 78 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 H3BMG7 143 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 I3L3M4 83 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 LEPROTO15243 131 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 TSPAN13O95857 204 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 IGHV4-30-4P0DP06 118 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 MIFP14174 115 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 LGALS3P17931 250 aaKnown RBP4.31□□□□□ -1.72
MSH6-205ENST00000454137 CRYBA4P53673 196 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 UBE2D3P61077 147 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 UBE2D2P62837 147 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 RPL39P62891 51 aaKnown RBP4.31□□□□□ -1.72
MSH6-205ENST00000454137 WFDC2Q14508 124 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 TMEM170BQ5T4T1 132 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 FAM74A4Q5TZK3 123 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 SLC25A29Q8N8R3 303 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 C20orf203Q8NBC4 194 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 RNF183Q96D59 192 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 DNAJC30Q96LL9 226 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 AMELXQ99217 191 aa4.31□□□□□ -1.72
MSH6-205ENST00000454137 IGHV3OR16-12A0A075B7B8 117 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 TRBV10-1A0A0K0K1A3 114 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 TMEM223A0PJW6 202 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 J3QQQ9 107 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 IGHV3-53P01767 116 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 IGHV3-30P01768 117 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 IGHV3-30-5P0DP03 117 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 TSPEAR-AS2P59090 65 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 KRTAP10-11P60412 298 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 CFAP126Q5VTH2 177 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 ZNRF2Q8NHG8 242 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 PYGO1Q9Y3Y4 419 aa4.3□□□□□ -1.72
MSH6-205ENST00000454137 DNAH3Q8TD57 4116 aa4.29□□□□□ -1.72
MSH6-205ENST00000454137 IGLV4-3A0A075B6K6 122 aa4.29□□□□□ -1.72
MSH6-205ENST00000454137 TRBV20-1A0A075B6N2 111 aa4.29□□□□□ -1.72
MSH6-205ENST00000454137 TMEM238C9JI98 176 aa4.29□□□□□ -1.72
MSH6-205ENST00000454137 ZNF22P17026 224 aaPredicted RBP4.29□□□□□ -1.72
MSH6-205ENST00000454137 EMP1P54849 157 aa4.29□□□□□ -1.72
MSH6-205ENST00000454137 C10orf126Q8N4M7 172 aa4.29□□□□□ -1.72
MSH6-205ENST00000454137 SIGMAR1Q99720 223 aa4.29□□□□□ -1.72
MSH6-205ENST00000454137 VCX2Q9H322 139 aa4.29□□□□□ -1.72
MSH6-205ENST00000454137 CMYA5Q8N3K9 4069 aa4.29□□□□□ -1.72
MSH6-205ENST00000454137 TRGV1A0A0A0MS02 117 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.28□□□□□ -1.72
MSH6-205ENST00000454137 IGHV3-73A0A0B4J1V6 119 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 A0A0B4J2C4 111 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 TRBV6-4A0A1B0GX49 114 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 M0QXV9 152 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 APOMO95445 188 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 P0DMU3 169 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 FAM231AP0DMU4 169 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 FAM231CP0DMU5 169 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 TIRAPP58753 221 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 ETDBQ3ZM63 59 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
MSH6-205ENST00000454137 NBEAL1Q6ZS30 2694 aa4.28□□□□□ -1.73
MSH6-205ENST00000454137 LOC107984156A0A0G2JMH3 177 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 CFC1BP0CG36 223 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 CFC1P0CG37 223 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 PSMB2P49721 201 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 MRPS36P82909 103 aaKnown RBP4.27□□□□□ -1.73
MSH6-205ENST00000454137 Q6ZTI0 123 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 SH2D6Q7Z4S9 175 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 SBSPONQ8IVN8 264 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 ARL17AQ8IVW1 177 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 Q8NAQ8 132 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 PPDPFLQ8WWR9 84 aa4.27□□□□□ -1.73
MSH6-205ENST00000454137 C11orf68Q9H3H3 251 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms