RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 RPL36AP83881 106 aaKnown RBP6.04□□□□□ -1.44
SMCO1-202ENST00000452776 BSPH1Q075Z2 132 aa6.04□□□□□ -1.44
SMCO1-202ENST00000452776 RPL36ALQ969Q0 106 aaKnown RBP6.04□□□□□ -1.44
SMCO1-202ENST00000452776 CHD9Q3L8U1 2897 aa6.04□□□□□ -1.44
SMCO1-202ENST00000452776 USP34Q70CQ2 3546 aa6.03□□□□□ -1.44
SMCO1-202ENST00000452776 A0A1W2PRX2 142 aa6.03□□□□□ -1.44
SMCO1-202ENST00000452776 SMIM1B2RUZ4 78 aa6.03□□□□□ -1.44
SMCO1-202ENST00000452776 H3BUA1 57 aa6.03□□□□□ -1.44
SMCO1-202ENST00000452776 CDSNQ15517 529 aa6.03□□□□□ -1.44
SMCO1-202ENST00000452776 TRANK1O15050 2925 aa6.03□□□□□ -1.44
SMCO1-202ENST00000452776 C5orf42Q9H799 3197 aa6.03□□□□□ -1.44
SMCO1-202ENST00000452776 K7EMT4 169 aa6.02□□□□□ -1.45
SMCO1-202ENST00000452776 ATP6V0E1O15342 81 aa6.02□□□□□ -1.45
SMCO1-202ENST00000452776 C11orf68Q9H3H3 251 aaKnown RBP6.02□□□□□ -1.45
SMCO1-202ENST00000452776 FAM186AA6NE01 2351 aa6.02□□□□□ -1.45
SMCO1-202ENST00000452776 ESRGQ1W209 222 aa6.02□□□□□ -1.45
SMCO1-202ENST00000452776 KHDC1LQ5JSQ8 128 aa6.02□□□□□ -1.45
SMCO1-202ENST00000452776 LINC00242Q5T6M2 205 aa6.02□□□□□ -1.45
SMCO1-202ENST00000452776 FAM215AQ9Y5M1 114 aa6.02□□□□□ -1.45
SMCO1-202ENST00000452776 LOC110117498A0A087WWA1 95 aa6.01□□□□□ -1.45
SMCO1-202ENST00000452776 IGKV2-29A2NJV5 120 aaPredicted RBP6.01□□□□□ -1.45
SMCO1-202ENST00000452776 LINC00337Q8N6G1 96 aa6.01□□□□□ -1.45
SMCO1-202ENST00000452776 TMEM105Q8N8V8 129 aa6.01□□□□□ -1.45
SMCO1-202ENST00000452776 LINC00474Q9P2X8 69 aa6.01□□□□□ -1.45
SMCO1-202ENST00000452776 MOB4Q9Y3A3 225 aa6.01□□□□□ -1.45
SMCO1-202ENST00000452776 A0A0U1RRA0 63 aa6□□□□□ -1.45
SMCO1-202ENST00000452776 NBL1P41271 181 aa6□□□□□ -1.45
SMCO1-202ENST00000452776 SNRPD3P62318 126 aaKnown RBP6□□□□□ -1.45
SMCO1-202ENST00000452776 C9orf129Q5T035 196 aaKnown RBP6□□□□□ -1.45
SMCO1-202ENST00000452776 RMI2Q96E14 147 aa6□□□□□ -1.45
SMCO1-202ENST00000452776 RHPN1-AS1Q9BWJ2 59 aa6□□□□□ -1.45
SMCO1-202ENST00000452776 IGKV2-28A0A075B6P5 120 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 LY6G6DO95868 133 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 IGKV2D-28P01615 120 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 PRB3Q04118 309 aaPredicted RBP5.99□□□□□ -1.45
SMCO1-202ENST00000452776 RNASE13Q5GAN3 156 aaKnown RBP5.99□□□□□ -1.45
SMCO1-202ENST00000452776 FDCSPQ8NFU4 85 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 LINC00467Q9BRT7 94 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 MUC4Q99102 2169 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 BAHCC1Q9P281 2608 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.99□□□□□ -1.45
SMCO1-202ENST00000452776 IGHV3OR16-12A0A075B7B8 117 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 LYRM9A8MSI8 78 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 E7EQL1 145 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 LINC01547P58512 204 aaPredicted RBP5.99□□□□□ -1.45
SMCO1-202ENST00000452776 COX6A2Q02221 97 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 Q8N814 137 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 SNURFQ9Y675 71 aa5.99□□□□□ -1.45
SMCO1-202ENST00000452776 TRBV7-4A0A0J9YYF1 115 aa5.98□□□□□ -1.45
SMCO1-202ENST00000452776 IGHV3-53P01767 116 aa5.98□□□□□ -1.45
SMCO1-202ENST00000452776 LINC00158P58513 81 aa5.98□□□□□ -1.45
SMCO1-202ENST00000452776 Q1T7F1 81 aa5.98□□□□□ -1.45
SMCO1-202ENST00000452776 C22orf34Q6ZV56 151 aa5.98□□□□□ -1.45
SMCO1-202ENST00000452776 WFDC9Q8NEX5 89 aa5.98□□□□□ -1.45
SMCO1-202ENST00000452776 COX7B2Q8TF08 81 aa5.98□□□□□ -1.45
SMCO1-202ENST00000452776 MED13Q9UHV7 2174 aa5.98□□□□□ -1.45
SMCO1-202ENST00000452776 TRBV6-4A0A1B0GX49 114 aa5.97□□□□□ -1.45
SMCO1-202ENST00000452776 SAA4P35542 130 aa5.97□□□□□ -1.45
SMCO1-202ENST00000452776 SS18Q15532 418 aa5.97□□□□□ -1.45
SMCO1-202ENST00000452776 WDR87Q6ZQQ6 2873 aa5.97□□□□□ -1.45
SMCO1-202ENST00000452776 PATE3B3GLJ2 98 aa5.97□□□□□ -1.45
SMCO1-202ENST00000452776 G3V318 75 aa5.97□□□□□ -1.45
SMCO1-202ENST00000452776 K7EQD1 137 aa5.97□□□□□ -1.45
SMCO1-202ENST00000452776 FUSP35637 526 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMCO1-202ENST00000452776 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.97□□□□□ -1.45
SMCO1-202ENST00000452776 C11orf44Q8N8P7 122 aa5.97□□□□□ -1.45
SMCO1-202ENST00000452776 TMEM254Q8TBM7 123 aa5.97□□□□□ -1.45
SMCO1-202ENST00000452776 PAX4O43316 350 aa5.96□□□□□ -1.46
SMCO1-202ENST00000452776 GRNP28799 593 aaKnown RBP5.96□□□□□ -1.46
SMCO1-202ENST00000452776 CCL18P55774 89 aa5.96□□□□□ -1.46
SMCO1-202ENST00000452776 UNQ9165/PRO28630Q6UXU0 137 aa5.96□□□□□ -1.46
SMCO1-202ENST00000452776 Q6ZQT0 140 aa5.96□□□□□ -1.46
SMCO1-202ENST00000452776 MPLKIPQ8TAP9 179 aa5.96□□□□□ -1.46
SMCO1-202ENST00000452776 CACNA1BQ00975 2339 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 TRAV10A0A0B4J240 114 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 IGHV3-38A0A0C4DH36 116 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 A0A1W2PNU3 283 aaPredicted RBP5.95□□□□□ -1.46
SMCO1-202ENST00000452776 CCL21O00585 134 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 HAMPP81172 84 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 ATP1A1-AS1Q5TC04 95 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 IGFL3Q6UXB1 125 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 IL17DQ8TAD2 202 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 ZNF318Q5VUA4 2279 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 SLPIP03973 132 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 DEFB1P60022 68 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 NREPQ16612 68 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 MRPL55Q7Z7F7 128 aaKnown RBP5.95□□□□□ -1.46
SMCO1-202ENST00000452776 C5orf56Q8N8D9 126 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 KRTAP4-7Q9BYR0 210 aa5.95□□□□□ -1.46
SMCO1-202ENST00000452776 ZDBF2Q9HCK1 2354 aa5.94□□□□□ -1.46
SMCO1-202ENST00000452776 CHD8Q9HCK8 2581 aa5.94□□□□□ -1.46
SMCO1-202ENST00000452776 ARHGAP32A7KAX9 2087 aa5.94□□□□□ -1.46
SMCO1-202ENST00000452776 PRYO14603 147 aa5.94□□□□□ -1.46
SMCO1-202ENST00000452776 DAD1P61803 113 aa5.94□□□□□ -1.46
SMCO1-202ENST00000452776 TNP2Q05952 138 aa5.94□□□□□ -1.46
SMCO1-202ENST00000452776 C9orf66Q5T8R8 295 aa5.94□□□□□ -1.46
SMCO1-202ENST00000452776 Q6ZVQ6 151 aa5.94□□□□□ -1.46
SMCO1-202ENST00000452776 C6orf223Q8N319 242 aa5.94□□□□□ -1.46
SMCO1-202ENST00000452776 LINC01560Q8TB33 94 aa5.94□□□□□ -1.46
SMCO1-202ENST00000452776 CDC42SE2Q9NRR3 84 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms