RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 AP1S3Q96PC3 154 aa6.56□□□□□ -1.36
LINC01238-204ENST00000451070 JPT2Q9H910 190 aa6.56□□□□□ -1.36
LINC01238-204ENST00000451070 TMEM167BQ9NRX6 74 aa6.56□□□□□ -1.36
LINC01238-204ENST00000451070 A0A1W2PRE2 83 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 GAGE12JA6NER3 117 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 GAGE4Q13068 117 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 ZNF726P1Q15940 193 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 GAGE13Q4V321 117 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 PIK3CD-AS1Q5SR53 167 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 FAM162BQ5T6X4 162 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 ANAPC13Q9BS18 74 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 SAMD10Q9BYL1 202 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 MANBALQ9NQG1 85 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 ARL2-SNX15V9GYD0 113 aa6.55□□□□□ -1.36
LINC01238-204ENST00000451070 A8MWV9 139 aa6.54□□□□□ -1.36
LINC01238-204ENST00000451070 B5MCH6 92 aa6.54□□□□□ -1.36
LINC01238-204ENST00000451070 LCE2AQ5TA79 106 aaPredicted RBP6.54□□□□□ -1.36
LINC01238-204ENST00000451070 CST9LP1Q5W188 147 aa6.54□□□□□ -1.36
LINC01238-204ENST00000451070 Q6ZSA8 131 aa6.54□□□□□ -1.36
LINC01238-204ENST00000451070 DAZ4Q86SG3 579 aaKnown RBP6.54□□□□□ -1.36
LINC01238-204ENST00000451070 C14orf178Q8N769 122 aaPredicted RBP6.54□□□□□ -1.36
LINC01238-204ENST00000451070 TM2D2Q9BX73 214 aa6.54□□□□□ -1.36
LINC01238-204ENST00000451070 DAZ3Q9NR90 486 aaKnown RBP6.54□□□□□ -1.36
LINC01238-204ENST00000451070 TRAPPC1Q9Y5R8 145 aa6.54□□□□□ -1.36
LINC01238-204ENST00000451070 FABP5P3A8MUU1 101 aa6.53□□□□□ -1.36
LINC01238-204ENST00000451070 LECT2O14960 151 aa6.53□□□□□ -1.36
LINC01238-204ENST00000451070 S100A4P26447 101 aaKnown RBP6.53□□□□□ -1.36
LINC01238-204ENST00000451070 ASIPP42127 132 aa6.53□□□□□ -1.36
LINC01238-204ENST00000451070 CRIP1P50238 77 aa6.53□□□□□ -1.36
LINC01238-204ENST00000451070 Q86TA4 180 aa6.53□□□□□ -1.36
LINC01238-204ENST00000451070 IL36BQ9NZH7 164 aa6.53□□□□□ -1.36
LINC01238-204ENST00000451070 TRAV8-3A0A0A6YYJ7 113 aa6.52□□□□□ -1.37
LINC01238-204ENST00000451070 CTXND1A0A1B0GTU2 59 aa6.52□□□□□ -1.37
LINC01238-204ENST00000451070 F8W1H4 67 aa6.52□□□□□ -1.37
LINC01238-204ENST00000451070 TMEM250H0YL14 139 aa6.52□□□□□ -1.37
LINC01238-204ENST00000451070 H3BVH4 76 aa6.52□□□□□ -1.37
LINC01238-204ENST00000451070 PEX7O00628 323 aa6.52□□□□□ -1.37
LINC01238-204ENST00000451070 ERASQ7Z444 233 aa6.52□□□□□ -1.37
LINC01238-204ENST00000451070 OR13C6PQ8NH95 151 aa6.52□□□□□ -1.37
LINC01238-204ENST00000451070 ZC2HC1AQ96GY0 325 aa6.52□□□□□ -1.37
LINC01238-204ENST00000451070 MAP1LC3CQ9BXW4 147 aa6.52□□□□□ -1.37
LINC01238-204ENST00000451070 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.51□□□□□ -1.37
LINC01238-204ENST00000451070 FAM231BA6NCW3 169 aa6.51□□□□□ -1.37
LINC01238-204ENST00000451070 ARMS2P0C7Q2 107 aa6.51□□□□□ -1.37
LINC01238-204ENST00000451070 MPV17L2Q567V2 206 aa6.51□□□□□ -1.37
LINC01238-204ENST00000451070 COX8CQ7Z4L0 72 aa6.51□□□□□ -1.37
LINC01238-204ENST00000451070 FAM213BQ8TBF2 198 aa6.51□□□□□ -1.37
LINC01238-204ENST00000451070 C18orf32Q8TCD1 76 aa6.51□□□□□ -1.37
LINC01238-204ENST00000451070 BAALCQ8WXS3 180 aa6.51□□□□□ -1.37
LINC01238-204ENST00000451070 A0A1B0GX51 115 aa6.5□□□□□ -1.37
LINC01238-204ENST00000451070 GRIFINA4D1Z8 144 aa6.5□□□□□ -1.37
LINC01238-204ENST00000451070 RHODO00212 210 aa6.5□□□□□ -1.37
LINC01238-204ENST00000451070 NUPR1O60356 82 aa6.5□□□□□ -1.37
LINC01238-204ENST00000451070 SH2D1AO60880 128 aa6.5□□□□□ -1.37
LINC01238-204ENST00000451070 SPINK8P0C7L1 97 aa6.5□□□□□ -1.37
LINC01238-204ENST00000451070 RPS28P62857 69 aaKnown RBP6.5□□□□□ -1.37
LINC01238-204ENST00000451070 LINC01620Q4KN68 170 aa6.5□□□□□ -1.37
LINC01238-204ENST00000451070 PPDPFQ9H3Y8 114 aa6.5□□□□□ -1.37
LINC01238-204ENST00000451070 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
LINC01238-204ENST00000451070 A0A087WWL8 130 aa6.49□□□□□ -1.37
LINC01238-204ENST00000451070 KRTDAPP60985 99 aa6.49□□□□□ -1.37
LINC01238-204ENST00000451070 FAM74A4Q5TZK3 123 aa6.49□□□□□ -1.37
LINC01238-204ENST00000451070 SLC25A34Q6PIV7 304 aa6.49□□□□□ -1.37
LINC01238-204ENST00000451070 Q6Q795 121 aa6.49□□□□□ -1.37
LINC01238-204ENST00000451070 SYT8Q8NBV8 401 aa6.49□□□□□ -1.37
LINC01238-204ENST00000451070 OR10AG1Q8NH19 301 aa6.49□□□□□ -1.37
LINC01238-204ENST00000451070 SPANXB1Q9NS25 103 aaPredicted RBP6.49□□□□□ -1.37
LINC01238-204ENST00000451070 TMSB15BA0A087X1C1 80 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 MUC21A0A0G2JKD1 596 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 MUC21A0A140T8X8 626 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 SERF1AO75920 110 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 PLA2G1BP04054 148 aaKnown RBP6.48□□□□□ -1.37
LINC01238-204ENST00000451070 BCL2P10415 239 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 LINC00310P59036 64 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 SCXQ7RTU7 201 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 FMC1Q96HJ9 113 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 KLK12Q9UKR0 248 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 PHLDA3Q9Y5J5 127 aa6.48□□□□□ -1.37
LINC01238-204ENST00000451070 IGKV2D-24A0A075B6R9 120 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 TRBV6-1A0A0K0K1D8 114 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 A0A1W2PPM0 123 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 M0R381 172 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 LTAP01374 205 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 FABP2P12104 132 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 SEC61GP60059 68 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 KRTAP10-4P60372 401 aaPredicted RBP6.47□□□□□ -1.37
LINC01238-204ENST00000451070 UBE2D3P61077 147 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 UBE2D2P62837 147 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 CCL20P78556 96 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 RNASEKQ6P5S7 137 aaKnown RBP6.47□□□□□ -1.37
LINC01238-204ENST00000451070 BAGE3Q86Y29 109 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 BAGE2Q86Y30 109 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 MBD3L1Q8WWY6 194 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 UBE2WQ96B02 151 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 BORCS7Q96B45 105 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 RMI2Q96E14 147 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 SPCS1Q9Y6A9 102 aa6.47□□□□□ -1.37
LINC01238-204ENST00000451070 TRBV7-3A0A075B6L6 115 aa6.46□□□□□ -1.38
LINC01238-204ENST00000451070 TRBV10-1A0A0K0K1A3 114 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms