RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 NAA38Q9BRA0 125 aaKnown RBP11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 K7ERJ3 54 aa11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 OVOL2Q9BRP0 275 aa11.47□□□□□ -0.57
AP000253.1-201ENST00000449339 J3QQQ9 107 aa11.46□□□□□ -0.57
AP000253.1-201ENST00000449339 MRPS36P82909 103 aaKnown RBP11.45□□□□□ -0.58
AP000253.1-201ENST00000449339 LGALS3P17931 250 aaKnown RBP11.44□□□□□ -0.58
AP000253.1-201ENST00000449339 Q6ZUT4 128 aa11.44□□□□□ -0.58
AP000253.1-201ENST00000449339 DAZ4Q86SG3 579 aaKnown RBP11.44□□□□□ -0.58
AP000253.1-201ENST00000449339 PRIMA1Q86XR5 153 aa11.44□□□□□ -0.58
AP000253.1-201ENST00000449339 DAZ3Q9NR90 486 aaKnown RBP11.44□□□□□ -0.58
AP000253.1-201ENST00000449339 A6NJY4 79 aa11.44□□□□□ -0.58
AP000253.1-201ENST00000449339 LEPROTO15243 131 aa11.44□□□□□ -0.58
AP000253.1-201ENST00000449339 IGHV3-64A0A075B6Q5 118 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 A0A0J9YY99 117 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 GAGE12JA6NER3 117 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 UBE2D3P61077 147 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 UBE2D2P62837 147 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 GAGE4Q13068 117 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 GAGE5Q13069 117 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 SRSF9Q13242 221 aaKnown RBP eCLIP11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 GAGE13Q4V321 117 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 A0A1W2PPM0 123 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 GAGE10A6NGK3 116 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 MAST4O15021 2626 aa11.43□□□□□ -0.58
AP000253.1-201ENST00000449339 C12orf74Q32Q52 190 aa11.42□□□□□ -0.58
AP000253.1-201ENST00000449339 SAMD5Q5TGI4 173 aa11.41□□□□□ -0.58
AP000253.1-201ENST00000449339 DGAT2L7PQ6IED9 249 aa11.41□□□□□ -0.58
AP000253.1-201ENST00000449339 NTM-AS1Q6ZSK4 140 aa11.41□□□□□ -0.58
AP000253.1-201ENST00000449339 X6R8D5 127 aa11.41□□□□□ -0.58
AP000253.1-201ENST00000449339 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
AP000253.1-201ENST00000449339 TRBV6-4A0A1B0GX49 114 aa11.41□□□□□ -0.58
AP000253.1-201ENST00000449339 TIMM21Q9BVV7 248 aa11.41□□□□□ -0.58
AP000253.1-201ENST00000449339 DEFB135Q30KP9 77 aa11.4□□□□□ -0.58
AP000253.1-201ENST00000449339 OXLD1Q5BKU9 147 aa11.4□□□□□ -0.58
AP000253.1-201ENST00000449339 GTF2H5Q6ZYL4 71 aa11.4□□□□□ -0.58
AP000253.1-201ENST00000449339 C3orf56Q8N813 242 aa11.4□□□□□ -0.58
AP000253.1-201ENST00000449339 PKD1L1Q8TDX9 2849 aa11.4□□□□□ -0.58
AP000253.1-201ENST00000449339 TRGV4A0A0C4DH28 118 aa11.4□□□□□ -0.58
AP000253.1-201ENST00000449339 LINC00694P0DN24 101 aa11.4□□□□□ -0.58
AP000253.1-201ENST00000449339 A0A1B0GWB2 263 aa11.39□□□□□ -0.59
AP000253.1-201ENST00000449339 K7EP34 96 aa11.39□□□□□ -0.59
AP000253.1-201ENST00000449339 FABP2P12104 132 aa11.39□□□□□ -0.59
AP000253.1-201ENST00000449339 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
AP000253.1-201ENST00000449339 LOC100131303A0A0U1RQF7 123 aa11.39□□□□□ -0.59
AP000253.1-201ENST00000449339 WIPF1O43516 503 aa11.39□□□□□ -0.59
AP000253.1-201ENST00000449339 IGHV3-30-3P0DP02 117 aa11.39□□□□□ -0.59
AP000253.1-201ENST00000449339 UBE2D1P51668 147 aa11.39□□□□□ -0.59
AP000253.1-201ENST00000449339 SPANXB1Q9NS25 103 aaPredicted RBP11.39□□□□□ -0.59
AP000253.1-201ENST00000449339 DEFB130BP0DP73 79 aa11.38□□□□□ -0.59
AP000253.1-201ENST00000449339 DEFB130AP0DP74 79 aa11.38□□□□□ -0.59
AP000253.1-201ENST00000449339 TRAV8-3A0A0A6YYJ7 113 aa11.37□□□□□ -0.59
AP000253.1-201ENST00000449339 FHL2Q14192 279 aa11.37□□□□□ -0.59
AP000253.1-201ENST00000449339 GEMIN7Q9H840 131 aaKnown RBP11.37□□□□□ -0.59
AP000253.1-201ENST00000449339 SPCS1Q9Y6A9 102 aa11.37□□□□□ -0.59
AP000253.1-201ENST00000449339 IGLL5B9A064 214 aa11.37□□□□□ -0.59
AP000253.1-201ENST00000449339 SBSPONQ8IVN8 264 aa11.37□□□□□ -0.59
AP000253.1-201ENST00000449339 GTSF1LQ9H1H1 148 aa11.37□□□□□ -0.59
AP000253.1-201ENST00000449339 CSDC2Q9Y534 153 aaKnown RBP11.37□□□□□ -0.59
AP000253.1-201ENST00000449339 IGHV1-58A0A0C4DH39 117 aa11.36□□□□□ -0.59
AP000253.1-201ENST00000449339 DEFB4AO15263 64 aa11.36□□□□□ -0.59
AP000253.1-201ENST00000449339 COL6A5A8TX70 2615 aa11.36□□□□□ -0.59
AP000253.1-201ENST00000449339 G3V4G9 280 aa11.36□□□□□ -0.59
AP000253.1-201ENST00000449339 IGHV3-30P01768 117 aa11.36□□□□□ -0.59
AP000253.1-201ENST00000449339 IGHV3-30-5P0DP03 117 aa11.36□□□□□ -0.59
AP000253.1-201ENST00000449339 IGHV4-30-4P0DP06 118 aa11.36□□□□□ -0.59
AP000253.1-201ENST00000449339 KRTAP10-11P60412 298 aa11.36□□□□□ -0.59
AP000253.1-201ENST00000449339 KIR2DL5BQ8NHK3 375 aa11.36□□□□□ -0.59
AP000253.1-201ENST00000449339 CMYA5Q8N3K9 4069 aa11.35□□□□□ -0.59
AP000253.1-201ENST00000449339 APOC4P55056 127 aa11.35□□□□□ -0.59
AP000253.1-201ENST00000449339 C10orf126Q8N4M7 172 aa11.35□□□□□ -0.59
AP000253.1-201ENST00000449339 VSIG2Q96IQ7 327 aa11.35□□□□□ -0.59
AP000253.1-201ENST00000449339 SPINK8P0C7L1 97 aa11.35□□□□□ -0.59
AP000253.1-201ENST00000449339 SMIM9A6NGZ8 99 aa11.34□□□□□ -0.59
AP000253.1-201ENST00000449339 TIRAPP58753 221 aa11.34□□□□□ -0.59
AP000253.1-201ENST00000449339 LINC00612Q8N6U2 182 aa11.34□□□□□ -0.59
AP000253.1-201ENST00000449339 TMEM243Q9BU79 118 aa11.34□□□□□ -0.59
AP000253.1-201ENST00000449339 CDKN2A-AS1Q9UH64 79 aa11.34□□□□□ -0.59
AP000253.1-201ENST00000449339 IGLV5-45A0A087WSX0 123 aa11.33□□□□□ -0.59
AP000253.1-201ENST00000449339 UBE2L6O14933 153 aa11.33□□□□□ -0.59
AP000253.1-201ENST00000449339 SMAGPQ0VAQ4 97 aa11.33□□□□□ -0.59
AP000253.1-201ENST00000449339 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.59
AP000253.1-201ENST00000449339 CDC42SE2Q9NRR3 84 aa11.33□□□□□ -0.6
AP000253.1-201ENST00000449339 A0A0J9YXY3 114 aa11.32□□□□□ -0.6
AP000253.1-201ENST00000449339 LINC00242Q5T6M2 205 aa11.32□□□□□ -0.6
AP000253.1-201ENST00000449339 A8MZ25 164 aa11.32□□□□□ -0.6
AP000253.1-201ENST00000449339 HERVK_113P63121 156 aa11.32□□□□□ -0.6
AP000253.1-201ENST00000449339 COX6A2Q02221 97 aa11.32□□□□□ -0.6
AP000253.1-201ENST00000449339 FAM222AQ5U5X8 452 aa11.32□□□□□ -0.6
AP000253.1-201ENST00000449339 TRAV13-1A0A0B4J241 112 aa11.31□□□□□ -0.6
AP000253.1-201ENST00000449339 IGHV4-28A0A0C4DH34 117 aa11.31□□□□□ -0.6
AP000253.1-201ENST00000449339 NDUFA12Q9UI09 145 aa11.31□□□□□ -0.6
AP000253.1-201ENST00000449339 FAM19A3Q7Z5A8 133 aa11.31□□□□□ -0.6
AP000253.1-201ENST00000449339 TMEM101Q96IK0 257 aa11.31□□□□□ -0.6
AP000253.1-201ENST00000449339 PGPEP1Q9NXJ5 209 aa11.31□□□□□ -0.6
AP000253.1-201ENST00000449339 H7C423 109 aa11.3□□□□□ -0.6
AP000253.1-201ENST00000449339 APOMO95445 188 aa11.3□□□□□ -0.6
AP000253.1-201ENST00000449339 SCGB1A1P11684 91 aa11.3□□□□□ -0.6
AP000253.1-201ENST00000449339 TRBV6-8A0A0A6YYG3 113 aa11.29□□□□□ -0.6
AP000253.1-201ENST00000449339 CFC1BP0CG36 223 aa11.28□□□□□ -0.6
AP000253.1-201ENST00000449339 CFC1P0CG37 223 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms