RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 RPL13AP40429 203 aaKnown RBP8.23□□□□□ -1.09
RFX3-208ENST00000449234 Q1RN00 199 aa8.23□□□□□ -1.09
RFX3-208ENST00000449234 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
RFX3-208ENST00000449234 C9JAW5 83 aa8.22□□□□□ -1.09
RFX3-208ENST00000449234 SPINK8P0C7L1 97 aa8.22□□□□□ -1.09
RFX3-208ENST00000449234 INSL3P51460 131 aa8.22□□□□□ -1.09
RFX3-208ENST00000449234 ADAMTSL4-AS1Q5T5F5 129 aa8.22□□□□□ -1.09
RFX3-208ENST00000449234 LINC00242Q5T6M2 205 aa8.22□□□□□ -1.09
RFX3-208ENST00000449234 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
RFX3-208ENST00000449234 ICOSQ9Y6W8 199 aa8.22□□□□□ -1.09
RFX3-208ENST00000449234 NDUFA7O95182 113 aa8.21□□□□□ -1.1
RFX3-208ENST00000449234 IGLV1-51P01701 117 aa8.21□□□□□ -1.1
RFX3-208ENST00000449234 CDC42SE2Q9NRR3 84 aa8.21□□□□□ -1.1
RFX3-208ENST00000449234 Q9UF83 564 aa8.21□□□□□ -1.1
RFX3-208ENST00000449234 NACAE9PAV3 2078 aa8.21□□□□□ -1.1
RFX3-208ENST00000449234 SPG11Q96JI7 2443 aa8.21□□□□□ -1.1
RFX3-208ENST00000449234 IGHV3-38A0A0C4DH36 116 aa8.2□□□□□ -1.1
RFX3-208ENST00000449234 A0A1B0GV72 72 aa8.2□□□□□ -1.1
RFX3-208ENST00000449234 PRM2P04554 102 aa8.2□□□□□ -1.1
RFX3-208ENST00000449234 SFTA2Q6UW10 78 aa8.2□□□□□ -1.1
RFX3-208ENST00000449234 TMEM243Q9BU79 118 aa8.2□□□□□ -1.1
RFX3-208ENST00000449234 PIEZO1Q92508 2521 aa8.19□□□□□ -1.1
RFX3-208ENST00000449234 TRIAP1O43715 76 aa8.19□□□□□ -1.1
RFX3-208ENST00000449234 PF4P02776 101 aa8.19□□□□□ -1.1
RFX3-208ENST00000449234 MRPL23Q16540 153 aaKnown RBP8.19□□□□□ -1.1
RFX3-208ENST00000449234 NTM-AS1Q6ZSK4 140 aa8.19□□□□□ -1.1
RFX3-208ENST00000449234 LINC01006Q8NI28 216 aa8.19□□□□□ -1.1
RFX3-208ENST00000449234 LST1O00453 97 aa8.18□□□□□ -1.1
RFX3-208ENST00000449234 COX6A2Q02221 97 aa8.18□□□□□ -1.1
RFX3-208ENST00000449234 RNASE13Q5GAN3 156 aaKnown RBP8.18□□□□□ -1.1
RFX3-208ENST00000449234 DEFB121Q5J5C9 76 aa8.18□□□□□ -1.1
RFX3-208ENST00000449234 Q6ZTI0 123 aa8.18□□□□□ -1.1
RFX3-208ENST00000449234 LINC00308Q8TCZ7 52 aa8.18□□□□□ -1.1
RFX3-208ENST00000449234 CITED2Q99967 270 aaPredicted RBP8.18□□□□□ -1.1
RFX3-208ENST00000449234 USP9XQ93008 2570 aaPredicted RBP8.18□□□□□ -1.1
RFX3-208ENST00000449234 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
RFX3-208ENST00000449234 UBE2L6O14933 153 aa8.17□□□□□ -1.1
RFX3-208ENST00000449234 CSNK1G2-AS1Q8NCQ2 148 aa8.17□□□□□ -1.1
RFX3-208ENST00000449234 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
RFX3-208ENST00000449234 ESM1Q9NQ30 184 aa8.17□□□□□ -1.1
RFX3-208ENST00000449234 C19orf73Q9NVV2 129 aa8.17□□□□□ -1.1
RFX3-208ENST00000449234 PLAC8L1A1L4L8 177 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 GAGE12JA6NER3 117 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 F5H768 121 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 H7C2G1 150 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 GIG44P09565 113 aaPredicted RBP8.16□□□□□ -1.1
RFX3-208ENST00000449234 RELNP78509 3460 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 GAGE4Q13068 117 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 GAGE5Q13069 117 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 IGSF10Q6WRI0 2623 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 CFAP46Q8IYW2 2715 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.16□□□□□ -1.1
RFX3-208ENST00000449234 WFDC11Q8NEX6 87 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 KIR2DL5BQ8NHK3 375 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 Q9H8V8 135 aa8.16□□□□□ -1.1
RFX3-208ENST00000449234 NOP10Q9NPE3 64 aaKnown RBP8.16□□□□□ -1.1
RFX3-208ENST00000449234 ASH1LQ9NR48 2969 aaKnown RBP8.16□□□□□ -1.1
RFX3-208ENST00000449234 ANKRD17O75179 2603 aaKnown RBP8.16□□□□□ -1.1
RFX3-208ENST00000449234 TRAV26-1A0A087WT03 109 aa8.15□□□□□ -1.1
RFX3-208ENST00000449234 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
RFX3-208ENST00000449234 LINC00694P0DN24 101 aa8.15□□□□□ -1.1
RFX3-208ENST00000449234 Q6Q795 121 aa8.15□□□□□ -1.1
RFX3-208ENST00000449234 SHISA2Q6UWI4 295 aa8.15□□□□□ -1.1
RFX3-208ENST00000449234 C2orf82Q6UX34 121 aa8.15□□□□□ -1.1
RFX3-208ENST00000449234 NTN5Q8WTR8 489 aaPredicted RBP8.15□□□□□ -1.1
RFX3-208ENST00000449234 SORL1Q92673 2214 aa8.15□□□□□ -1.1
RFX3-208ENST00000449234 TRGV2A0A075B6R0 118 aa8.14□□□□□ -1.11
RFX3-208ENST00000449234 FAM240AA0A1B0GVK7 77 aa8.14□□□□□ -1.11
RFX3-208ENST00000449234 A0A1W2PRX2 142 aa8.14□□□□□ -1.11
RFX3-208ENST00000449234 SMIM9A6NGZ8 99 aa8.14□□□□□ -1.11
RFX3-208ENST00000449234 COX7A2LO14548 114 aa8.14□□□□□ -1.11
RFX3-208ENST00000449234 HILS1P60008 231 aa8.14□□□□□ -1.11
RFX3-208ENST00000449234 KRTAP1-1Q07627 177 aa8.14□□□□□ -1.11
RFX3-208ENST00000449234 FAM222AQ5U5X8 452 aa8.14□□□□□ -1.11
RFX3-208ENST00000449234 LINC01561Q8N1V8 128 aa8.14□□□□□ -1.11
RFX3-208ENST00000449234 UBE2WQ96B02 151 aa8.14□□□□□ -1.11
RFX3-208ENST00000449234 TRAV13-2A0A0B4J235 113 aa8.13□□□□□ -1.11
RFX3-208ENST00000449234 TRGV4A0A0C4DH28 118 aa8.13□□□□□ -1.11
RFX3-208ENST00000449234 A8MZ25 164 aa8.13□□□□□ -1.11
RFX3-208ENST00000449234 TRACP01848 142 aa8.13□□□□□ -1.11
RFX3-208ENST00000449234 ACYP1P07311 99 aa8.13□□□□□ -1.11
RFX3-208ENST00000449234 FHL2Q14192 279 aa8.13□□□□□ -1.11
RFX3-208ENST00000449234 PRIMA1Q86XR5 153 aa8.13□□□□□ -1.11
RFX3-208ENST00000449234 LINC00612Q8N6U2 182 aa8.13□□□□□ -1.11
RFX3-208ENST00000449234 TRAV13-1A0A0B4J241 112 aa8.12□□□□□ -1.11
RFX3-208ENST00000449234 TRAV8-4A0A0B4J246 113 aa8.12□□□□□ -1.11
RFX3-208ENST00000449234 GAGE7O76087 117 aa8.12□□□□□ -1.11
RFX3-208ENST00000449234 GAGE12FP0CL80 117 aa8.12□□□□□ -1.11
RFX3-208ENST00000449234 GAGE12GP0CL81 117 aa8.12□□□□□ -1.11
RFX3-208ENST00000449234 GAGE12IP0CL82 117 aa8.12□□□□□ -1.11
RFX3-208ENST00000449234 XGP55808 180 aa8.12□□□□□ -1.11
RFX3-208ENST00000449234 CKS1BP61024 79 aa8.12□□□□□ -1.11
RFX3-208ENST00000449234 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
RFX3-208ENST00000449234 TRBV6-8A0A0A6YYG3 113 aa8.11□□□□□ -1.11
RFX3-208ENST00000449234 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
RFX3-208ENST00000449234 COX7B2Q8TF08 81 aa8.11□□□□□ -1.11
RFX3-208ENST00000449234 UBR5O95071 2799 aaPredicted RBP8.1□□□□□ -1.11
RFX3-208ENST00000449234 A0A1B0GUV1 79 aa8.1□□□□□ -1.11
RFX3-208ENST00000449234 CITED1Q99966 193 aa8.1□□□□□ -1.11
RFX3-208ENST00000449234 FLNCQ14315 2725 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms