RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ANAPC13Q9BS18 74 aa10.65□□□□□ -0.7
SF1-211ENST00000448404 LOC100131303A0A0U1RQF7 123 aa10.65□□□□□ -0.7
SF1-211ENST00000448404 ERG28Q9UKR5 140 aa10.65□□□□□ -0.7
SF1-211ENST00000448404 A0A0J9YY99 117 aa10.65□□□□□ -0.71
SF1-211ENST00000448404 CARD19Q96LW7 228 aa10.65□□□□□ -0.71
SF1-211ENST00000448404 CHCHD7Q9BUK0 85 aa10.65□□□□□ -0.71
SF1-211ENST00000448404 A8MWV9 139 aa10.64□□□□□ -0.71
SF1-211ENST00000448404 J3QQQ9 107 aa10.64□□□□□ -0.71
SF1-211ENST00000448404 NPC2P61916 151 aa10.64□□□□□ -0.71
SF1-211ENST00000448404 AMELXQ99217 191 aa10.64□□□□□ -0.71
SF1-211ENST00000448404 B5MCH6 92 aa10.64□□□□□ -0.71
SF1-211ENST00000448404 LINC00694P0DN24 101 aa10.64□□□□□ -0.71
SF1-211ENST00000448404 RNASE1P07998 156 aaKnown RBP10.63□□□□□ -0.71
SF1-211ENST00000448404 RHOHQ15669 191 aa10.63□□□□□ -0.71
SF1-211ENST00000448404 GAGE7O76087 117 aa10.62□□□□□ -0.71
SF1-211ENST00000448404 GAGE12FP0CL80 117 aa10.62□□□□□ -0.71
SF1-211ENST00000448404 GAGE12GP0CL81 117 aa10.62□□□□□ -0.71
SF1-211ENST00000448404 GAGE12IP0CL82 117 aa10.62□□□□□ -0.71
SF1-211ENST00000448404 GAGE12JA6NER3 117 aa10.62□□□□□ -0.71
SF1-211ENST00000448404 RHODO00212 210 aa10.62□□□□□ -0.71
SF1-211ENST00000448404 LY6G6DO95868 133 aa10.62□□□□□ -0.71
SF1-211ENST00000448404 GAGE4Q13068 117 aa10.62□□□□□ -0.71
SF1-211ENST00000448404 GAGE5Q13069 117 aa10.62□□□□□ -0.71
SF1-211ENST00000448404 H7C2G1 150 aa10.61□□□□□ -0.71
SF1-211ENST00000448404 HERVK_113P61574 105 aa10.61□□□□□ -0.71
SF1-211ENST00000448404 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.61□□□□□ -0.71
SF1-211ENST00000448404 ATP6V0E2Q8NHE4 81 aa10.61□□□□□ -0.71
SF1-211ENST00000448404 TMEM223A0PJW6 202 aa10.61□□□□□ -0.71
SF1-211ENST00000448404 LGALS3P17931 250 aaKnown RBP10.61□□□□□ -0.71
SF1-211ENST00000448404 INAFM1C9JVW0 142 aa10.6□□□□□ -0.71
SF1-211ENST00000448404 C10orf126Q8N4M7 172 aa10.6□□□□□ -0.71
SF1-211ENST00000448404 PPDPFLQ8WWR9 84 aa10.6□□□□□ -0.71
SF1-211ENST00000448404 UBE2D4Q9Y2X8 147 aa10.6□□□□□ -0.71
SF1-211ENST00000448404 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
SF1-211ENST00000448404 C19orf73Q9NVV2 129 aa10.6□□□□□ -0.71
SF1-211ENST00000448404 HILS1P60008 231 aa10.59□□□□□ -0.71
SF1-211ENST00000448404 GAGE6Q13070 117 aa10.59□□□□□ -0.71
SF1-211ENST00000448404 DAND5Q8N907 189 aa10.59□□□□□ -0.71
SF1-211ENST00000448404 F8P00451 2351 aa10.59□□□□□ -0.71
SF1-211ENST00000448404 A0A0U1RRA0 63 aa10.59□□□□□ -0.71
SF1-211ENST00000448404 RS1O15537 224 aa10.59□□□□□ -0.71
SF1-211ENST00000448404 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
SF1-211ENST00000448404 ZFAND6Q6FIF0 208 aa10.59□□□□□ -0.71
SF1-211ENST00000448404 TEN1Q86WV5 123 aa10.59□□□□□ -0.71
SF1-211ENST00000448404 TEX29Q8N6K0 151 aa10.59□□□□□ -0.71
SF1-211ENST00000448404 TCL1BO95988 128 aa10.58□□□□□ -0.72
SF1-211ENST00000448404 NTM-AS1Q6ZSK4 140 aa10.58□□□□□ -0.72
SF1-211ENST00000448404 IGHV3-30-3P0DP02 117 aa10.58□□□□□ -0.72
SF1-211ENST00000448404 COX6A2Q02221 97 aa10.58□□□□□ -0.72
SF1-211ENST00000448404 BEAN1Q3B7T3 259 aa10.58□□□□□ -0.72
SF1-211ENST00000448404 IGLV1-51P01701 117 aa10.57□□□□□ -0.72
SF1-211ENST00000448404 LINC00482Q8N8I6 264 aa10.57□□□□□ -0.72
SF1-211ENST00000448404 ZNF625Q96I27 306 aaPredicted RBP10.57□□□□□ -0.72
SF1-211ENST00000448404 TRBV20-1A0A075B6N2 111 aa10.57□□□□□ -0.72
SF1-211ENST00000448404 TRGV2A0A075B6R0 118 aa10.57□□□□□ -0.72
SF1-211ENST00000448404 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
SF1-211ENST00000448404 PLAC8L1A1L4L8 177 aa10.57□□□□□ -0.72
SF1-211ENST00000448404 TRAV13-1A0A0B4J241 112 aa10.56□□□□□ -0.72
SF1-211ENST00000448404 DEFB4AO15263 64 aa10.56□□□□□ -0.72
SF1-211ENST00000448404 IGHV3-30P01768 117 aa10.56□□□□□ -0.72
SF1-211ENST00000448404 IGHV3-30-5P0DP03 117 aa10.56□□□□□ -0.72
SF1-211ENST00000448404 CDKN2A-AS1Q9UH64 79 aa10.56□□□□□ -0.72
SF1-211ENST00000448404 A6NJY4 79 aa10.56□□□□□ -0.72
SF1-211ENST00000448404 SCGB1C2P0DMR2 95 aa10.56□□□□□ -0.72
SF1-211ENST00000448404 PAPPA-AS1Q5QFB9 102 aa10.56□□□□□ -0.72
SF1-211ENST00000448404 ANKRD29Q8N6D5 301 aa10.56□□□□□ -0.72
SF1-211ENST00000448404 CFC1BP0CG36 223 aa10.55□□□□□ -0.72
SF1-211ENST00000448404 CFC1P0CG37 223 aa10.55□□□□□ -0.72
SF1-211ENST00000448404 TRAV25A0A0B4J276 109 aa10.55□□□□□ -0.72
SF1-211ENST00000448404 A4D1N5 150 aa10.55□□□□□ -0.72
SF1-211ENST00000448404 NHLRC4P0CG21 123 aaPredicted RBP10.55□□□□□ -0.72
SF1-211ENST00000448404 DEFB130BP0DP73 79 aa10.55□□□□□ -0.72
SF1-211ENST00000448404 DEFB130AP0DP74 79 aa10.55□□□□□ -0.72
SF1-211ENST00000448404 UBE2D1P51668 147 aa10.55□□□□□ -0.72
SF1-211ENST00000448404 UBE2D3P61077 147 aa10.55□□□□□ -0.72
SF1-211ENST00000448404 UBE2D2P62837 147 aa10.55□□□□□ -0.72
SF1-211ENST00000448404 ADAMTSL4-AS1Q5T5F5 129 aa10.55□□□□□ -0.72
SF1-211ENST00000448404 PF4P02776 101 aa10.54□□□□□ -0.72
SF1-211ENST00000448404 PRSS2P07478 247 aa10.54□□□□□ -0.72
SF1-211ENST00000448404 DGAT2L7PQ6IED9 249 aa10.54□□□□□ -0.72
SF1-211ENST00000448404 SHISA2Q6UWI4 295 aa10.54□□□□□ -0.72
SF1-211ENST00000448404 TIMM21Q9BVV7 248 aa10.54□□□□□ -0.72
SF1-211ENST00000448404 C16orf95Q9H693 158 aa10.54□□□□□ -0.72
SF1-211ENST00000448404 MUSTN1Q8IVN3 82 aa10.54□□□□□ -0.72
SF1-211ENST00000448404 STAB1Q9NY15 2570 aa10.54□□□□□ -0.72
SF1-211ENST00000448404 LEPROTO15243 131 aa10.54□□□□□ -0.72
SF1-211ENST00000448404 IL17DQ8TAD2 202 aa10.54□□□□□ -0.72
SF1-211ENST00000448404 TMEM263Q8WUH6 116 aaKnown RBP10.54□□□□□ -0.72
SF1-211ENST00000448404 NDUFA11Q86Y39 141 aa10.53□□□□□ -0.72
SF1-211ENST00000448404 A0A0J9YXY3 114 aa10.53□□□□□ -0.72
SF1-211ENST00000448404 MRPS36P82909 103 aaKnown RBP10.53□□□□□ -0.72
SF1-211ENST00000448404 PKD1L1Q8TDX9 2849 aa10.52□□□□□ -0.72
SF1-211ENST00000448404 A0A096LPF7 62 aa10.52□□□□□ -0.73
SF1-211ENST00000448404 K7EQD1 137 aa10.52□□□□□ -0.73
SF1-211ENST00000448404 CCDC179H3BU77 68 aa10.52□□□□□ -0.73
SF1-211ENST00000448404 CSNK1G2-AS1Q8NCQ2 148 aa10.52□□□□□ -0.73
SF1-211ENST00000448404 TRAV4A0A0B4J268 109 aa10.51□□□□□ -0.73
SF1-211ENST00000448404 HERV-K104P63124 156 aa10.51□□□□□ -0.73
SF1-211ENST00000448404 PYGO1Q9Y3Y4 419 aa10.51□□□□□ -0.73
SF1-211ENST00000448404 CRLF1O75462 422 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms