RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 A8MTW9 85 aa6.79□□□□□ -1.32
KLHL3-202ENST00000447439 STHQ8IWL8 128 aa6.79□□□□□ -1.32
KLHL3-202ENST00000447439 C9JAW5 83 aa6.79□□□□□ -1.32
KLHL3-202ENST00000447439 ANKRD29Q8N6D5 301 aa6.79□□□□□ -1.32
KLHL3-202ENST00000447439 CITED2Q99967 270 aaPredicted RBP6.79□□□□□ -1.32
KLHL3-202ENST00000447439 ERG28Q9UKR5 140 aa6.79□□□□□ -1.32
KLHL3-202ENST00000447439 SETXQ7Z333 2677 aaKnown RBP6.78□□□□□ -1.32
KLHL3-202ENST00000447439 IGHV1-58A0A0C4DH39 117 aa6.78□□□□□ -1.32
KLHL3-202ENST00000447439 ATP6V0E2Q8NHE4 81 aa6.78□□□□□ -1.32
KLHL3-202ENST00000447439 GEMIN7Q9H840 131 aaKnown RBP6.78□□□□□ -1.32
KLHL3-202ENST00000447439 PYGO1Q9Y3Y4 419 aa6.78□□□□□ -1.32
KLHL3-202ENST00000447439 VSIG2Q96IQ7 327 aa6.78□□□□□ -1.32
KLHL3-202ENST00000447439 MTORP42345 2549 aa6.78□□□□□ -1.32
KLHL3-202ENST00000447439 TENM4Q6N022 2769 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 TRAV13-1A0A0B4J241 112 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 GAGE12JA6NER3 117 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 CCL24O00175 119 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 RPL35AP18077 110 aaKnown RBP6.77□□□□□ -1.33
KLHL3-202ENST00000447439 GAGE4Q13068 117 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 GAGE5Q13069 117 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 PIK3CD-AS1Q5SR53 167 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 DGAT2L7PQ6IED9 249 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 SPATA25Q9BR10 227 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 LOC100131303A0A0U1RQF7 123 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 RS1O15537 224 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 CRYBA4P53673 196 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 CDIP1Q9H305 208 aa6.77□□□□□ -1.33
KLHL3-202ENST00000447439 NOP10Q9NPE3 64 aaKnown RBP6.77□□□□□ -1.33
KLHL3-202ENST00000447439 TRIAP1O43715 76 aa6.76□□□□□ -1.33
KLHL3-202ENST00000447439 SCGB1A1P11684 91 aa6.76□□□□□ -1.33
KLHL3-202ENST00000447439 TINCRA0A1B0GVN0 87 aa6.76□□□□□ -1.33
KLHL3-202ENST00000447439 MT-ATP8P03928 68 aa6.76□□□□□ -1.33
KLHL3-202ENST00000447439 NTM-AS1Q6ZSK4 140 aa6.76□□□□□ -1.33
KLHL3-202ENST00000447439 SPANXA1Q9NS26 97 aa6.76□□□□□ -1.33
KLHL3-202ENST00000447439 TRBV20-1A0A075B6N2 111 aa6.75□□□□□ -1.33
KLHL3-202ENST00000447439 SLC25A20O43772 301 aa6.75□□□□□ -1.33
KLHL3-202ENST00000447439 BEAN1Q3B7T3 259 aa6.75□□□□□ -1.33
KLHL3-202ENST00000447439 TEN1Q86WV5 123 aa6.75□□□□□ -1.33
KLHL3-202ENST00000447439 TMEM101Q96IK0 257 aa6.75□□□□□ -1.33
KLHL3-202ENST00000447439 A0A0B4J2C4 111 aa6.75□□□□□ -1.33
KLHL3-202ENST00000447439 IGKV3OR2-268A0A0C4DH90 116 aa6.75□□□□□ -1.33
KLHL3-202ENST00000447439 CLEC2BQ92478 149 aa6.75□□□□□ -1.33
KLHL3-202ENST00000447439 KMT2BQ9UMN6 2715 aaPredicted RBP6.75□□□□□ -1.33
KLHL3-202ENST00000447439 GAGE7O76087 117 aa6.74□□□□□ -1.33
KLHL3-202ENST00000447439 GAGE12FP0CL80 117 aa6.74□□□□□ -1.33
KLHL3-202ENST00000447439 GAGE12GP0CL81 117 aa6.74□□□□□ -1.33
KLHL3-202ENST00000447439 GAGE12IP0CL82 117 aa6.74□□□□□ -1.33
KLHL3-202ENST00000447439 XGP55808 180 aa6.74□□□□□ -1.33
KLHL3-202ENST00000447439 GIG44P09565 113 aaPredicted RBP6.73□□□□□ -1.33
KLHL3-202ENST00000447439 MIAQ16674 131 aa6.73□□□□□ -1.33
KLHL3-202ENST00000447439 LINC00242Q5T6M2 205 aa6.73□□□□□ -1.33
KLHL3-202ENST00000447439 PPDPFLQ8WWR9 84 aa6.73□□□□□ -1.33
KLHL3-202ENST00000447439 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.73□□□□□ -1.33
KLHL3-202ENST00000447439 NTN5Q8WTR8 489 aaPredicted RBP6.73□□□□□ -1.33
KLHL3-202ENST00000447439 Q9H8V8 135 aa6.73□□□□□ -1.33
KLHL3-202ENST00000447439 J3QKU1 62 aa6.73□□□□□ -1.33
KLHL3-202ENST00000447439 ZFAND6Q6FIF0 208 aa6.73□□□□□ -1.33
KLHL3-202ENST00000447439 SBSPONQ8IVN8 264 aa6.73□□□□□ -1.33
KLHL3-202ENST00000447439 YAE1D1Q9NRH1 226 aa6.73□□□□□ -1.33
KLHL3-202ENST00000447439 TEX49A0A1B0GTD5 131 aa6.72□□□□□ -1.33
KLHL3-202ENST00000447439 K7EQD1 137 aa6.72□□□□□ -1.33
KLHL3-202ENST00000447439 LRRC75A-AS1Q8N1F1 130 aa6.72□□□□□ -1.33
KLHL3-202ENST00000447439 DNAJC30Q96LL9 226 aa6.72□□□□□ -1.33
KLHL3-202ENST00000447439 ICOSQ9Y6W8 199 aa6.72□□□□□ -1.33
KLHL3-202ENST00000447439 RPL13AP40429 203 aaKnown RBP6.72□□□□□ -1.33
KLHL3-202ENST00000447439 LINC01620Q4KN68 170 aa6.72□□□□□ -1.33
KLHL3-202ENST00000447439 LINC01006Q8NI28 216 aa6.72□□□□□ -1.33
KLHL3-202ENST00000447439 TRGV2A0A075B6R0 118 aa6.71□□□□□ -1.34
KLHL3-202ENST00000447439 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.34
KLHL3-202ENST00000447439 IL17DQ8TAD2 202 aa6.71□□□□□ -1.34
KLHL3-202ENST00000447439 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.34
KLHL3-202ENST00000447439 SMR3AQ99954 134 aa6.71□□□□□ -1.34
KLHL3-202ENST00000447439 ATXN8Q156A1 80 aa6.71□□□□□ -1.34
KLHL3-202ENST00000447439 SPANXDQ9BXN6 97 aa6.71□□□□□ -1.34
KLHL3-202ENST00000447439 SPANXCQ9NY87 97 aa6.71□□□□□ -1.34
KLHL3-202ENST00000447439 M0QXV9 152 aa6.7□□□□□ -1.34
KLHL3-202ENST00000447439 SOSTDC1Q6X4U4 206 aa6.7□□□□□ -1.34
KLHL3-202ENST00000447439 ANK3Q12955 4377 aaKnown RBP6.7□□□□□ -1.34
KLHL3-202ENST00000447439 ITPR2Q14571 2701 aa6.7□□□□□ -1.34
KLHL3-202ENST00000447439 PLAC8L1A1L4L8 177 aa6.7□□□□□ -1.34
KLHL3-202ENST00000447439 SMIM1B2RUZ4 78 aa6.7□□□□□ -1.34
KLHL3-202ENST00000447439 PDZD2O15018 2839 aa6.7□□□□□ -1.34
KLHL3-202ENST00000447439 KRTAP1-1Q07627 177 aa6.69□□□□□ -1.34
KLHL3-202ENST00000447439 GAGE6Q13070 117 aa6.69□□□□□ -1.34
KLHL3-202ENST00000447439 NDUFA1O15239 70 aa6.69□□□□□ -1.34
KLHL3-202ENST00000447439 MEIG1Q5JSS6 88 aa6.69□□□□□ -1.34
KLHL3-202ENST00000447439 NBEAL2Q6ZNJ1 2754 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 FN1P02751 2386 aaKnown RBP6.68□□□□□ -1.34
KLHL3-202ENST00000447439 IGLV5-45A0A087WSX0 123 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 TRBV30A0A0K0K1B3 111 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 TIRAPP58753 221 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 PRIMA1Q86XR5 153 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 LINC00308Q8TCZ7 52 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 CDC42SE2Q9NRR3 84 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 TRAV4A0A0B4J268 109 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 H7C423 109 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 C2orf82Q6UX34 121 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 TMEM86BQ8N661 226 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 TOMM7Q9P0U1 55 aa6.68□□□□□ -1.34
KLHL3-202ENST00000447439 TRAV25A0A0B4J276 109 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms