RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 A0A1B0GXF2 115 aa6.37□□□□□ -1.39
PTPN3-204ENST00000446349 MLST8Q9BVC4 326 aa6.36□□□□□ -1.39
PTPN3-204ENST00000446349 IGKV2-24A0A0C4DH68 120 aa6.36□□□□□ -1.39
PTPN3-204ENST00000446349 LECT2O14960 151 aa6.36□□□□□ -1.39
PTPN3-204ENST00000446349 TRBV27A0A0K0K1C4 114 aa6.36□□□□□ -1.39
PTPN3-204ENST00000446349 FAM19A1Q7Z5A9 133 aa6.35□□□□□ -1.39
PTPN3-204ENST00000446349 TCL1BO95988 128 aa6.35□□□□□ -1.39
PTPN3-204ENST00000446349 AGRNO00468 2067 aa6.35□□□□□ -1.39
PTPN3-204ENST00000446349 KLLNB2CW77 178 aa6.35□□□□□ -1.39
PTPN3-204ENST00000446349 M0QY20 66 aa6.35□□□□□ -1.39
PTPN3-204ENST00000446349 HIGD2AQ9BW72 106 aa6.34□□□□□ -1.39
PTPN3-204ENST00000446349 ZFYVE26Q68DK2 2539 aa6.34□□□□□ -1.39
PTPN3-204ENST00000446349 LINC00467Q9BRT7 94 aa6.34□□□□□ -1.39
PTPN3-204ENST00000446349 M0R378 163 aa6.34□□□□□ -1.39
PTPN3-204ENST00000446349 K7ERJ3 54 aa6.34□□□□□ -1.39
PTPN3-204ENST00000446349 BPY2O14599 106 aa6.34□□□□□ -1.39
PTPN3-204ENST00000446349 FSHBP01225 129 aa6.33□□□□□ -1.4
PTPN3-204ENST00000446349 WISP2O76076 250 aa6.33□□□□□ -1.4
PTPN3-204ENST00000446349 LY6G6CO95867 125 aa6.33□□□□□ -1.4
PTPN3-204ENST00000446349 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
PTPN3-204ENST00000446349 IGLV1-51P01701 117 aa6.32□□□□□ -1.4
PTPN3-204ENST00000446349 IGHV4-30-4P0DP06 118 aa6.32□□□□□ -1.4
PTPN3-204ENST00000446349 IGLV4-3A0A075B6K6 122 aa6.32□□□□□ -1.4
PTPN3-204ENST00000446349 C20orf173Q96LM9 149 aa6.32□□□□□ -1.4
PTPN3-204ENST00000446349 IGKV2D-26A0A0A0MRZ7 120 aa6.32□□□□□ -1.4
PTPN3-204ENST00000446349 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
PTPN3-204ENST00000446349 U3KQK5 164 aa6.32□□□□□ -1.4
PTPN3-204ENST00000446349 DCANP1Q8TF63 244 aa6.32□□□□□ -1.4
PTPN3-204ENST00000446349 RPL28P46779 137 aaKnown RBP6.31□□□□□ -1.4
PTPN3-204ENST00000446349 RBX1P62877 108 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 ANKRD39Q53RE8 183 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 TMEM223A0PJW6 202 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 G3V4G9 280 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 C9orf85Q96MD7 179 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 ZNF80P51504 273 aaPredicted RBP6.31□□□□□ -1.4
PTPN3-204ENST00000446349 ASPHD1Q5U4P2 390 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 CDPF1Q6NVV7 123 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 C22orf34Q6ZV56 151 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 TP53TG3Q9ULZ0 132 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 C14orf132Q9NPU4 83 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 TRAV23DV6A0A075B6W5 121 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 UBE2D4Q9Y2X8 147 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 K7ERS5 55 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 PTPRBP23467 1997 aa6.31□□□□□ -1.4
PTPN3-204ENST00000446349 IGKV4-1P06312 121 aa6.3□□□□□ -1.4
PTPN3-204ENST00000446349 LINC00643Q86TS7 51 aa6.3□□□□□ -1.4
PTPN3-204ENST00000446349 WFDC9Q8NEX5 89 aa6.3□□□□□ -1.4
PTPN3-204ENST00000446349 BBC3Q96PG8 261 aaPredicted RBP6.3□□□□□ -1.4
PTPN3-204ENST00000446349 Q8IZM0 81 aa6.3□□□□□ -1.4
PTPN3-204ENST00000446349 MYO9AB2RTY4 2548 aa6.3□□□□□ -1.4
PTPN3-204ENST00000446349 MRPL55Q7Z7F7 128 aaKnown RBP6.3□□□□□ -1.4
PTPN3-204ENST00000446349 PTH2Q96A98 100 aa6.3□□□□□ -1.4
PTPN3-204ENST00000446349 A0A0J9YWU9 116 aa6.29□□□□□ -1.4
PTPN3-204ENST00000446349 BRWD1-AS2P59051 145 aa6.29□□□□□ -1.4
PTPN3-204ENST00000446349 IGF2RP11717 2491 aa6.29□□□□□ -1.4
PTPN3-204ENST00000446349 UBE2D3P61077 147 aa6.29□□□□□ -1.4
PTPN3-204ENST00000446349 DEFB1P60022 68 aa6.28□□□□□ -1.4
PTPN3-204ENST00000446349 LINC01561Q8N1V8 128 aa6.28□□□□□ -1.4
PTPN3-204ENST00000446349 CDKN2A-AS1Q9UH64 79 aa6.28□□□□□ -1.4
PTPN3-204ENST00000446349 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
PTPN3-204ENST00000446349 CNFNQ9BYD5 112 aa6.28□□□□□ -1.4
PTPN3-204ENST00000446349 IGLV2-8P01709 118 aa6.28□□□□□ -1.4
PTPN3-204ENST00000446349 DAND5Q8N907 189 aa6.28□□□□□ -1.4
PTPN3-204ENST00000446349 USP17L23D6RBM5 183 aa6.28□□□□□ -1.4
PTPN3-204ENST00000446349 TLN1Q9Y490 2541 aaKnown RBP6.27□□□□□ -1.41
PTPN3-204ENST00000446349 FAM19A5Q7Z5A7 132 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-204ENST00000446349 EGFEM1PQ0D2K5 195 aa6.27□□□□□ -1.41
PTPN3-204ENST00000446349 LINC00308Q8TCZ7 52 aa6.27□□□□□ -1.41
PTPN3-204ENST00000446349 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-204ENST00000446349 ZNF22P17026 224 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-204ENST00000446349 PRR15LQ9BU68 103 aa6.27□□□□□ -1.41
PTPN3-204ENST00000446349 LINC00959A0A1B0GUT2 108 aa6.27□□□□□ -1.41
PTPN3-204ENST00000446349 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.27□□□□□ -1.41
PTPN3-204ENST00000446349 NCOR2Q9Y618 2525 aa6.27□□□□□ -1.41
PTPN3-204ENST00000446349 UBE2D2P62837 147 aa6.26□□□□□ -1.41
PTPN3-204ENST00000446349 LRCOL1A6NCL2 159 aa6.26□□□□□ -1.41
PTPN3-204ENST00000446349 FXYD2P54710 66 aa6.26□□□□□ -1.41
PTPN3-204ENST00000446349 TP73-AS1Q9UF72 201 aa6.26□□□□□ -1.41
PTPN3-204ENST00000446349 V9GYY9 64 aa6.26□□□□□ -1.41
PTPN3-204ENST00000446349 CSDC2Q9Y534 153 aaKnown RBP6.26□□□□□ -1.41
PTPN3-204ENST00000446349 FRMD6-AS1P0C7T7 363 aa6.26□□□□□ -1.41
PTPN3-204ENST00000446349 GDF5OSQ5U4N7 250 aa6.26□□□□□ -1.41
PTPN3-204ENST00000446349 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
PTPN3-204ENST00000446349 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
PTPN3-204ENST00000446349 RNASE3P12724 160 aaKnown RBP6.25□□□□□ -1.41
PTPN3-204ENST00000446349 RNF185Q96GF1 192 aa6.25□□□□□ -1.41
PTPN3-204ENST00000446349 B5MCH6 92 aa6.25□□□□□ -1.41
PTPN3-204ENST00000446349 NDUFC1O43677 76 aa6.25□□□□□ -1.41
PTPN3-204ENST00000446349 CRIP3Q6Q6R5 217 aa6.25□□□□□ -1.41
PTPN3-204ENST00000446349 SVIPQ8NHG7 77 aa6.25□□□□□ -1.41
PTPN3-204ENST00000446349 NANOS2P60321 138 aaKnown RBP6.25□□□□□ -1.41
PTPN3-204ENST00000446349 TSHBP01222 138 aa6.25□□□□□ -1.41
PTPN3-204ENST00000446349 IGLV5-52A0A0A0MRZ9 124 aa6.24□□□□□ -1.41
PTPN3-204ENST00000446349 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
PTPN3-204ENST00000446349 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
PTPN3-204ENST00000446349 IGLV2-18A0A075B6J9 118 aa6.24□□□□□ -1.41
PTPN3-204ENST00000446349 LINC00173Q6ZV60 143 aa6.24□□□□□ -1.41
PTPN3-204ENST00000446349 PLAC8L1A1L4L8 177 aa6.24□□□□□ -1.41
PTPN3-204ENST00000446349 FOXI1Q12951 378 aa6.24□□□□□ -1.41
PTPN3-204ENST00000446349 C1orf134Q5TEV5 83 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms