RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 FAM104AQ969W3 186 aa13.81□□□□□ -0.2
PMPCB-204ENST00000444457 IGHV4-31P0DP07 118 aa13.81□□□□□ -0.2
PMPCB-204ENST00000444457 SMCR5Q8TEV8 140 aa13.81□□□□□ -0.2
PMPCB-204ENST00000444457 UBE2E2Q96LR5 201 aa13.81□□□□□ -0.2
PMPCB-204ENST00000444457 DUX5Q96PT3 197 aa13.81□□□□□ -0.2
PMPCB-204ENST00000444457 PYGO1Q9Y3Y4 419 aa13.81□□□□□ -0.2
PMPCB-204ENST00000444457 POLQO75417 2590 aa13.8□□□□□ -0.2
PMPCB-204ENST00000444457 SPINK13Q1W4C9 94 aa13.8□□□□□ -0.2
PMPCB-204ENST00000444457 LINC00643Q86TS7 51 aa13.8□□□□□ -0.2
PMPCB-204ENST00000444457 CSDC2Q9Y534 153 aaKnown RBP13.8□□□□□ -0.2
PMPCB-204ENST00000444457 ATP5G1P05496 136 aa13.8□□□□□ -0.2
PMPCB-204ENST00000444457 NPC2P61916 151 aa13.8□□□□□ -0.2
PMPCB-204ENST00000444457 LINC00526Q96FQ7 95 aa13.8□□□□□ -0.2
PMPCB-204ENST00000444457 SDIM1Q6ZPB5 146 aa13.79□□□□□ -0.2
PMPCB-204ENST00000444457 VSIG2Q96IQ7 327 aa13.79□□□□□ -0.2
PMPCB-204ENST00000444457 SORL1Q92673 2214 aa13.79□□□□□ -0.2
PMPCB-204ENST00000444457 IGHV1OR15-1A0A075B7D0 117 aa13.79□□□□□ -0.2
PMPCB-204ENST00000444457 CD28P10747 220 aa13.79□□□□□ -0.2
PMPCB-204ENST00000444457 TIMM17BO60830 172 aa13.78□□□□□ -0.2
PMPCB-204ENST00000444457 RNF152Q8N8N0 203 aa13.78□□□□□ -0.2
PMPCB-204ENST00000444457 HELZ2Q9BYK8 2649 aaKnown RBP13.78□□□□□ -0.2
PMPCB-204ENST00000444457 HERVK_113P63121 156 aa13.76□□□□□ -0.21
PMPCB-204ENST00000444457 KRTAP10-9P60411 292 aa13.75□□□□□ -0.21
PMPCB-204ENST00000444457 TINCRA0A1B0GVN0 87 aa13.75□□□□□ -0.21
PMPCB-204ENST00000444457 LRRC75A-AS1Q8N1F1 130 aa13.75□□□□□ -0.21
PMPCB-204ENST00000444457 CITED2Q99967 270 aaPredicted RBP13.75□□□□□ -0.21
PMPCB-204ENST00000444457 MXRA5Q9NR99 2828 aa13.75□□□□□ -0.21
PMPCB-204ENST00000444457 A8MZ25 164 aa13.74□□□□□ -0.21
PMPCB-204ENST00000444457 CXCL5P42830 114 aa13.74□□□□□ -0.21
PMPCB-204ENST00000444457 A0A1B0GX51 115 aa13.74□□□□□ -0.21
PMPCB-204ENST00000444457 C5orf38Q86SI9 138 aa13.74□□□□□ -0.21
PMPCB-204ENST00000444457 NBPF19A0A087WUL8 3843 aa13.73□□□□□ -0.21
PMPCB-204ENST00000444457 SLURP1P55000 103 aa13.73□□□□□ -0.21
PMPCB-204ENST00000444457 C18orf65Q6ZTR6 163 aa13.73□□□□□ -0.21
PMPCB-204ENST00000444457 LOC107984640A0A0U1RRK4 108 aa13.73□□□□□ -0.21
PMPCB-204ENST00000444457 COX7A2LO14548 114 aa13.73□□□□□ -0.21
PMPCB-204ENST00000444457 DEFB136Q30KP8 78 aa13.73□□□□□ -0.21
PMPCB-204ENST00000444457 ABCA12Q86UK0 2595 aa13.73□□□□□ -0.21
PMPCB-204ENST00000444457 PTPN13Q12923 2485 aa13.72□□□□□ -0.21
PMPCB-204ENST00000444457 J3KT08 172 aa13.72□□□□□ -0.21
PMPCB-204ENST00000444457 C5orf47Q569G3 176 aa13.72□□□□□ -0.21
PMPCB-204ENST00000444457 PEMTQ9UBM1 199 aa13.72□□□□□ -0.21
PMPCB-204ENST00000444457 COX7CP15954 63 aa13.71□□□□□ -0.21
PMPCB-204ENST00000444457 DEFB113Q30KQ7 82 aa13.71□□□□□ -0.21
PMPCB-204ENST00000444457 Q8N2B8 174 aa13.71□□□□□ -0.22
PMPCB-204ENST00000444457 KNCNA6PVL3 124 aa13.7□□□□□ -0.22
PMPCB-204ENST00000444457 RBMY1A1P0DJD3 496 aaKnown RBP13.7□□□□□ -0.22
PMPCB-204ENST00000444457 RBMY1CP0DJD4 496 aa13.7□□□□□ -0.22
PMPCB-204ENST00000444457 RBMY1FQ15415 496 aaKnown RBP13.7□□□□□ -0.22
PMPCB-204ENST00000444457 DAND5Q8N907 189 aa13.7□□□□□ -0.22
PMPCB-204ENST00000444457 EDA2RQ9HAV5 297 aa13.7□□□□□ -0.22
PMPCB-204ENST00000444457 DAZ2Q13117 558 aaKnown RBP13.69□□□□□ -0.22
PMPCB-204ENST00000444457 RNASE13Q5GAN3 156 aaKnown RBP13.69□□□□□ -0.22
PMPCB-204ENST00000444457 DAZ4Q86SG3 579 aaKnown RBP13.69□□□□□ -0.22
PMPCB-204ENST00000444457 DAZ3Q9NR90 486 aaKnown RBP13.69□□□□□ -0.22
PMPCB-204ENST00000444457 KLK5Q9Y337 293 aaPredicted RBP13.69□□□□□ -0.22
PMPCB-204ENST00000444457 DEFB131AP59861 70 aa13.69□□□□□ -0.22
PMPCB-204ENST00000444457 BEAN1Q3B7T3 259 aa13.69□□□□□ -0.22
PMPCB-204ENST00000444457 C2orf48Q96LS8 159 aa13.69□□□□□ -0.22
PMPCB-204ENST00000444457 NDUFA1O15239 70 aa13.68□□□□□ -0.22
PMPCB-204ENST00000444457 CRYGAP11844 174 aa13.68□□□□□ -0.22
PMPCB-204ENST00000444457 CREBBPQ92793 2442 aa13.68□□□□□ -0.22
PMPCB-204ENST00000444457 TRACP01848 142 aa13.67□□□□□ -0.22
PMPCB-204ENST00000444457 HIST1H4AP62805 103 aaKnown RBP13.67□□□□□ -0.22
PMPCB-204ENST00000444457 GCN1Q92616 2671 aaKnown RBP13.67□□□□□ -0.22
PMPCB-204ENST00000444457 A8MTW9 85 aa13.67□□□□□ -0.22
PMPCB-204ENST00000444457 Q96MF0 132 aa13.67□□□□□ -0.22
PMPCB-204ENST00000444457 TEX15Q9BXT5 2789 aa13.66□□□□□ -0.22
PMPCB-204ENST00000444457 SMIM9A6NGZ8 99 aa13.66□□□□□ -0.22
PMPCB-204ENST00000444457 FAM19A5Q7Z5A7 132 aaPredicted RBP13.66□□□□□ -0.22
PMPCB-204ENST00000444457 LINC00308Q8TCZ7 52 aa13.66□□□□□ -0.22
PMPCB-204ENST00000444457 C22orf24Q9Y442 160 aa13.66□□□□□ -0.22
PMPCB-204ENST00000444457 NAV2Q8IVL1 2488 aa13.66□□□□□ -0.22
PMPCB-204ENST00000444457 PLA2G2AP14555 144 aa13.66□□□□□ -0.22
PMPCB-204ENST00000444457 RPS28P62857 69 aaKnown RBP13.66□□□□□ -0.22
PMPCB-204ENST00000444457 UBE2D4Q9Y2X8 147 aa13.66□□□□□ -0.22
PMPCB-204ENST00000444457 HIST2H2BCQ6DN03 193 aa13.65□□□□□ -0.22
PMPCB-204ENST00000444457 FASNP49327 2511 aaKnown RBP13.65□□□□□ -0.22
PMPCB-204ENST00000444457 RBMY1BA6NDE4 496 aaKnown RBP13.65□□□□□ -0.22
PMPCB-204ENST00000444457 RBMY1EA6NEQ0 496 aaKnown RBP13.65□□□□□ -0.22
PMPCB-204ENST00000444457 RBMY1DP0C7P1 496 aaKnown RBP13.65□□□□□ -0.22
PMPCB-204ENST00000444457 HTN1P15515 57 aa13.65□□□□□ -0.22
PMPCB-204ENST00000444457 CIRBPQ14011 172 aaKnown RBP13.65□□□□□ -0.22
PMPCB-204ENST00000444457 C4orf3Q8WVX3 66 aa13.65□□□□□ -0.22
PMPCB-204ENST00000444457 FAM222AQ5U5X8 452 aa13.64□□□□□ -0.23
PMPCB-204ENST00000444457 GAGE2AQ6NT46 116 aa13.64□□□□□ -0.23
PMPCB-204ENST00000444457 CHCHD7Q9BUK0 85 aa13.64□□□□□ -0.23
PMPCB-204ENST00000444457 BAALC-AS2P0C853 105 aa13.63□□□□□ -0.23
PMPCB-204ENST00000444457 TIRAPP58753 221 aa13.63□□□□□ -0.23
PMPCB-204ENST00000444457 KHDC1LQ5JSQ8 128 aa13.63□□□□□ -0.23
PMPCB-204ENST00000444457 IGLV5-45A0A087WSX0 123 aa13.63□□□□□ -0.23
PMPCB-204ENST00000444457 ATOX1O00244 68 aa13.63□□□□□ -0.23
PMPCB-204ENST00000444457 NACAE9PAV3 2078 aa13.62□□□□□ -0.23
PMPCB-204ENST00000444457 INAFM2P0DMQ5 153 aa13.62□□□□□ -0.23
PMPCB-204ENST00000444457 CDKN2A-AS1Q9UH64 79 aa13.62□□□□□ -0.23
PMPCB-204ENST00000444457 KRTAP1-3Q8IUG1 177 aa13.61□□□□□ -0.23
PMPCB-204ENST00000444457 IGHV3-73A0A0B4J1V6 119 aa13.6□□□□□ -0.23
PMPCB-204ENST00000444457 J3QKU1 62 aa13.6□□□□□ -0.23
PMPCB-204ENST00000444457 MAP6D1Q9H9H5 199 aa13.6□□□□□ -0.23
PMPCB-204ENST00000444457 PRM2P04554 102 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms