RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 DGAT2L7PQ6IED9 249 aa13.9□□□□□ -0.18
FAM239A-202ENST00000438107 FAM19A3Q7Z5A8 133 aa13.9□□□□□ -0.18
FAM239A-202ENST00000438107 IL17DQ8TAD2 202 aa13.9□□□□□ -0.18
FAM239A-202ENST00000438107 NTN5Q8WTR8 489 aaPredicted RBP13.9□□□□□ -0.18
FAM239A-202ENST00000438107 DEFB113Q30KQ7 82 aa13.9□□□□□ -0.18
FAM239A-202ENST00000438107 LRRC75A-AS1Q8N1F1 130 aa13.9□□□□□ -0.18
FAM239A-202ENST00000438107 HERVK_113P63121 156 aa13.89□□□□□ -0.19
FAM239A-202ENST00000438107 TMEM101Q96IK0 257 aa13.89□□□□□ -0.19
FAM239A-202ENST00000438107 MXRA5Q9NR99 2828 aa13.88□□□□□ -0.19
FAM239A-202ENST00000438107 CIRBPQ14011 172 aaKnown RBP13.88□□□□□ -0.19
FAM239A-202ENST00000438107 TMEM86BQ8N661 226 aa13.88□□□□□ -0.19
FAM239A-202ENST00000438107 IGLV5-39A0A0G2JS06 123 aa13.88□□□□□ -0.19
FAM239A-202ENST00000438107 H3BT86 120 aa13.88□□□□□ -0.19
FAM239A-202ENST00000438107 ODF3L2Q3SX64 289 aa13.88□□□□□ -0.19
FAM239A-202ENST00000438107 CSDC2Q9Y534 153 aaKnown RBP13.88□□□□□ -0.19
FAM239A-202ENST00000438107 IGHV3OR16-12A0A075B7B8 117 aa13.87□□□□□ -0.19
FAM239A-202ENST00000438107 TRBV10-1A0A0K0K1A3 114 aa13.87□□□□□ -0.19
FAM239A-202ENST00000438107 STHQ8IWL8 128 aa13.87□□□□□ -0.19
FAM239A-202ENST00000438107 XCL2Q9UBD3 114 aa13.87□□□□□ -0.19
FAM239A-202ENST00000438107 APCP25054 2843 aa13.87□□□□□ -0.19
FAM239A-202ENST00000438107 C1orf158Q8N1D5 194 aa13.86□□□□□ -0.19
FAM239A-202ENST00000438107 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.86□□□□□ -0.19
FAM239A-202ENST00000438107 NPC2P61916 151 aa13.85□□□□□ -0.19
FAM239A-202ENST00000438107 UBE2WQ96B02 151 aa13.85□□□□□ -0.19
FAM239A-202ENST00000438107 TEX15Q9BXT5 2789 aa13.85□□□□□ -0.19
FAM239A-202ENST00000438107 LST1O00453 97 aa13.85□□□□□ -0.19
FAM239A-202ENST00000438107 RPL36AP83881 106 aaKnown RBP13.85□□□□□ -0.19
FAM239A-202ENST00000438107 COX6A2Q02221 97 aa13.85□□□□□ -0.19
FAM239A-202ENST00000438107 LINC00242Q5T6M2 205 aa13.85□□□□□ -0.19
FAM239A-202ENST00000438107 C2orf82Q6UX34 121 aa13.85□□□□□ -0.19
FAM239A-202ENST00000438107 RPL36ALQ969Q0 106 aaKnown RBP13.85□□□□□ -0.19
FAM239A-202ENST00000438107 NBPF19A0A087WUL8 3843 aa13.84□□□□□ -0.19
FAM239A-202ENST00000438107 H7C423 109 aa13.84□□□□□ -0.19
FAM239A-202ENST00000438107 DAZ2Q13117 558 aaKnown RBP13.84□□□□□ -0.19
FAM239A-202ENST00000438107 DAZ4Q86SG3 579 aaKnown RBP13.84□□□□□ -0.19
FAM239A-202ENST00000438107 Q96MF0 132 aa13.84□□□□□ -0.19
FAM239A-202ENST00000438107 DAZ3Q9NR90 486 aaKnown RBP13.84□□□□□ -0.19
FAM239A-202ENST00000438107 TENM4Q6N022 2769 aa13.84□□□□□ -0.19
FAM239A-202ENST00000438107 TRGV1A0A0A0MS02 117 aa13.83□□□□□ -0.19
FAM239A-202ENST00000438107 K7EQD1 137 aa13.83□□□□□ -0.19
FAM239A-202ENST00000438107 COPS9Q8WXC6 57 aa13.83□□□□□ -0.19
FAM239A-202ENST00000438107 CITED1Q99966 193 aa13.83□□□□□ -0.19
FAM239A-202ENST00000438107 CREBBPQ92793 2442 aa13.83□□□□□ -0.2
FAM239A-202ENST00000438107 CHD6Q8TD26 2715 aa13.83□□□□□ -0.2
FAM239A-202ENST00000438107 Q6ZSV7 163 aa13.82□□□□□ -0.2
FAM239A-202ENST00000438107 TEX49A0A1B0GTD5 131 aa13.82□□□□□ -0.2
FAM239A-202ENST00000438107 Q9H8V8 135 aa13.82□□□□□ -0.2
FAM239A-202ENST00000438107 TRAV8-4A0A0B4J246 113 aa13.81□□□□□ -0.2
FAM239A-202ENST00000438107 TRAV4A0A0B4J268 109 aa13.81□□□□□ -0.2
FAM239A-202ENST00000438107 LINC00308Q8TCZ7 52 aa13.81□□□□□ -0.2
FAM239A-202ENST00000438107 LINC00694P0DN24 101 aa13.81□□□□□ -0.2
FAM239A-202ENST00000438107 TEX29Q8N6K0 151 aa13.81□□□□□ -0.2
FAM239A-202ENST00000438107 ZNF469Q96JG9 3925 aaPredicted RBP13.8□□□□□ -0.2
FAM239A-202ENST00000438107 SMIM1B2RUZ4 78 aa13.8□□□□□ -0.2
FAM239A-202ENST00000438107 KRTAP1-3Q8IUG1 177 aa13.8□□□□□ -0.2
FAM239A-202ENST00000438107 DAND5Q8N907 189 aa13.8□□□□□ -0.2
FAM239A-202ENST00000438107 CLEC2BQ92478 149 aa13.8□□□□□ -0.2
FAM239A-202ENST00000438107 CITED2Q99967 270 aaPredicted RBP13.8□□□□□ -0.2
FAM239A-202ENST00000438107 NTM-AS1Q6ZSK4 140 aa13.79□□□□□ -0.2
FAM239A-202ENST00000438107 PPDPFQ9H3Y8 114 aa13.79□□□□□ -0.2
FAM239A-202ENST00000438107 SNCGO76070 127 aa13.78□□□□□ -0.2
FAM239A-202ENST00000438107 DEFB121Q5J5C9 76 aa13.78□□□□□ -0.2
FAM239A-202ENST00000438107 CDC42SE2Q9NRR3 84 aa13.78□□□□□ -0.2
FAM239A-202ENST00000438107 CMC4P56277 68 aaPredicted RBP13.77□□□□□ -0.21
FAM239A-202ENST00000438107 HERV-K104P63124 156 aa13.77□□□□□ -0.21
FAM239A-202ENST00000438107 Q6ZTI0 123 aa13.77□□□□□ -0.21
FAM239A-202ENST00000438107 CCL24O00175 119 aa13.76□□□□□ -0.21
FAM239A-202ENST00000438107 Q6Q795 121 aa13.76□□□□□ -0.21
FAM239A-202ENST00000438107 ZNF625Q96I27 306 aaPredicted RBP13.76□□□□□ -0.21
FAM239A-202ENST00000438107 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
FAM239A-202ENST00000438107 F5H768 121 aa13.75□□□□□ -0.21
FAM239A-202ENST00000438107 TRAV13-1A0A0B4J241 112 aa13.75□□□□□ -0.21
FAM239A-202ENST00000438107 MRPL23Q16540 153 aaKnown RBP13.75□□□□□ -0.21
FAM239A-202ENST00000438107 FAM240AA0A1B0GVK7 77 aa13.74□□□□□ -0.21
FAM239A-202ENST00000438107 GAGE2BQ13066 116 aa13.74□□□□□ -0.21
FAM239A-202ENST00000438107 GAGE2EQ4V326 116 aa13.74□□□□□ -0.21
FAM239A-202ENST00000438107 GAGE2DQ9UEU5 116 aa13.74□□□□□ -0.21
FAM239A-202ENST00000438107 TLN2Q9Y4G6 2542 aa13.74□□□□□ -0.21
FAM239A-202ENST00000438107 ITPR3Q14573 2671 aa13.74□□□□□ -0.21
FAM239A-202ENST00000438107 TRAV26-1A0A087WT03 109 aa13.73□□□□□ -0.21
FAM239A-202ENST00000438107 GAGE12JA6NER3 117 aa13.73□□□□□ -0.21
FAM239A-202ENST00000438107 DNAJC9-AS1A6NH13 148 aa13.73□□□□□ -0.21
FAM239A-202ENST00000438107 COX7A2LO14548 114 aa13.73□□□□□ -0.21
FAM239A-202ENST00000438107 NDUFA7O95182 113 aa13.73□□□□□ -0.21
FAM239A-202ENST00000438107 GAGE4Q13068 117 aa13.73□□□□□ -0.21
FAM239A-202ENST00000438107 GAGE5Q13069 117 aa13.73□□□□□ -0.21
FAM239A-202ENST00000438107 PRIMA1Q86XR5 153 aa13.73□□□□□ -0.21
FAM239A-202ENST00000438107 HIST2H2BCQ6DN03 193 aa13.73□□□□□ -0.21
FAM239A-202ENST00000438107 ANAPC13Q9BS18 74 aa13.73□□□□□ -0.21
FAM239A-202ENST00000438107 MEIG1Q5JSS6 88 aa13.72□□□□□ -0.21
FAM239A-202ENST00000438107 SHISA2Q6UWI4 295 aa13.72□□□□□ -0.21
FAM239A-202ENST00000438107 SOSTDC1Q6X4U4 206 aa13.72□□□□□ -0.21
FAM239A-202ENST00000438107 TMEM243Q9BU79 118 aa13.72□□□□□ -0.21
FAM239A-202ENST00000438107 C16orf74Q96GX8 76 aa13.72□□□□□ -0.21
FAM239A-202ENST00000438107 UBE2L6O14933 153 aa13.71□□□□□ -0.21
FAM239A-202ENST00000438107 A0A1W2PRX2 142 aa13.71□□□□□ -0.22
FAM239A-202ENST00000438107 CRLF1O75462 422 aa13.71□□□□□ -0.22
FAM239A-202ENST00000438107 NOP10Q9NPE3 64 aaKnown RBP13.71□□□□□ -0.22
FAM239A-202ENST00000438107 C15orf53Q8NAA6 179 aa13.7□□□□□ -0.22
FAM239A-202ENST00000438107 CCDC168Q8NDH2 2452 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms