RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 CASC10Q5T4H9 136 aa18.06■□□□□ 0.48
TMEM248-205ENST00000433271 Q8N976 141 aa18.06■□□□□ 0.48
TMEM248-205ENST00000433271 PAPPA-AS1Q5QFB9 102 aa18.05■□□□□ 0.48
TMEM248-205ENST00000433271 MAP1LC3CQ9BXW4 147 aa18.05■□□□□ 0.48
TMEM248-205ENST00000433271 IGLV4-60A0A075B6I1 120 aa18.05■□□□□ 0.48
TMEM248-205ENST00000433271 Q6ZN92 141 aa18.05■□□□□ 0.48
TMEM248-205ENST00000433271 CDC42SE2Q9NRR3 84 aa18.05■□□□□ 0.48
TMEM248-205ENST00000433271 ZNF664Q8N3J9 261 aa18.04■□□□□ 0.48
TMEM248-205ENST00000433271 Q6ZUT4 128 aa18.03■□□□□ 0.48
TMEM248-205ENST00000433271 UBE2DNLQ8IWF7 75 aa18.03■□□□□ 0.48
TMEM248-205ENST00000433271 Q8N3U1 123 aa18.03■□□□□ 0.48
TMEM248-205ENST00000433271 BAALCQ8WXS3 180 aa18.03■□□□□ 0.48
TMEM248-205ENST00000433271 STARD9Q9P2P6 4700 aa18.03■□□□□ 0.48
TMEM248-205ENST00000433271 PRSS1P07477 247 aa18.02■□□□□ 0.48
TMEM248-205ENST00000433271 OR10D4PQ8NGN7 298 aa18.02■□□□□ 0.48
TMEM248-205ENST00000433271 VCX2Q9H322 139 aa18.02■□□□□ 0.48
TMEM248-205ENST00000433271 C3orf79P0CE67 100 aa18.01■□□□□ 0.47
TMEM248-205ENST00000433271 LINC01556Q5JQF7 62 aa18.01■□□□□ 0.47
TMEM248-205ENST00000433271 SIVA1O15304 175 aa18.01■□□□□ 0.47
TMEM248-205ENST00000433271 DNAH10OSP0CZ25 163 aa18.01■□□□□ 0.47
TMEM248-205ENST00000433271 KRTDAPP60985 99 aa18.01■□□□□ 0.47
TMEM248-205ENST00000433271 AMELXQ99217 191 aa18.01■□□□□ 0.47
TMEM248-205ENST00000433271 SYS1-DBNDD2H3BUS1 97 aa18■□□□□ 0.47
TMEM248-205ENST00000433271 IGHV3-30P01768 117 aa17.99■□□□□ 0.47
TMEM248-205ENST00000433271 IGHV3-33P01772 117 aa17.99■□□□□ 0.47
TMEM248-205ENST00000433271 IGHV3-30-3P0DP02 117 aa17.99■□□□□ 0.47
TMEM248-205ENST00000433271 IGHV3-30-5P0DP03 117 aa17.99■□□□□ 0.47
TMEM248-205ENST00000433271 PMVKQ15126 192 aa17.99■□□□□ 0.47
TMEM248-205ENST00000433271 RNASE13Q5GAN3 156 aaKnown RBP17.99■□□□□ 0.47
TMEM248-205ENST00000433271 TEX43Q6ZNM6 134 aa17.99■□□□□ 0.47
TMEM248-205ENST00000433271 PLECQ15149 4684 aaKnown RBP17.99■□□□□ 0.47
TMEM248-205ENST00000433271 SPATA12Q7Z6I5 190 aa17.98■□□□□ 0.47
TMEM248-205ENST00000433271 CST9LQ9H4G1 147 aa17.98■□□□□ 0.47
TMEM248-205ENST00000433271 Q9H8V8 135 aa17.98■□□□□ 0.47
TMEM248-205ENST00000433271 ANGP03950 147 aaKnown RBP17.98■□□□□ 0.47
TMEM248-205ENST00000433271 TRAV12-1A0A0B4J245 112 aa17.97■□□□□ 0.47
TMEM248-205ENST00000433271 H0Y8G0 127 aa17.97■□□□□ 0.47
TMEM248-205ENST00000433271 ZC2HC1BQ5TFG8 222 aa17.97■□□□□ 0.47
TMEM248-205ENST00000433271 PRSS29PA6NIE9 313 aa17.96■□□□□ 0.47
TMEM248-205ENST00000433271 PET117Q6UWS5 81 aa17.96■□□□□ 0.47
TMEM248-205ENST00000433271 LOC105371267A0A1B0GV96 52 aa17.95■□□□□ 0.46
TMEM248-205ENST00000433271 C2orf88Q9BSF0 95 aa17.95■□□□□ 0.46
TMEM248-205ENST00000433271 LINC00269Q8N2A0 174 aa17.94■□□□□ 0.46
TMEM248-205ENST00000433271 KLK12Q9UKR0 248 aa17.94■□□□□ 0.46
TMEM248-205ENST00000433271 ODF1Q14990 250 aa17.91■□□□□ 0.46
TMEM248-205ENST00000433271 LGALS9CQ6DKI2 356 aa17.91■□□□□ 0.46
TMEM248-205ENST00000433271 PRR34Q9NV39 138 aa17.91■□□□□ 0.46
TMEM248-205ENST00000433271 AKR1D1P51857 326 aa17.9■□□□□ 0.46
TMEM248-205ENST00000433271 REG3AQ06141 175 aa17.9■□□□□ 0.46
TMEM248-205ENST00000433271 K7EP13 123 aa17.9■□□□□ 0.46
TMEM248-205ENST00000433271 LINC01545Q5VT33 79 aa17.9■□□□□ 0.46
TMEM248-205ENST00000433271 TRAV9-2A0A087WT02 112 aa17.89■□□□□ 0.45
TMEM248-205ENST00000433271 TRAV13-1A0A0B4J241 112 aa17.89■□□□□ 0.45
TMEM248-205ENST00000433271 UBE2D1P51668 147 aa17.89■□□□□ 0.45
TMEM248-205ENST00000433271 CHTOPQ9Y3Y2 248 aaKnown RBP17.89■□□□□ 0.45
TMEM248-205ENST00000433271 IGKV3OR2-268A0A0C4DH90 116 aa17.88■□□□□ 0.45
TMEM248-205ENST00000433271 CLPSL2Q6UWE3 100 aa17.88■□□□□ 0.45
TMEM248-205ENST00000433271 C10orf126Q8N4M7 172 aa17.88■□□□□ 0.45
TMEM248-205ENST00000433271 C20orf202A1L168 122 aa17.87■□□□□ 0.45
TMEM248-205ENST00000433271 MRPL35Q9NZE8 188 aaKnown RBP17.87■□□□□ 0.45
TMEM248-205ENST00000433271 LINC00959A0A1B0GUT2 108 aa17.87■□□□□ 0.45
TMEM248-205ENST00000433271 F8VRH5 84 aa17.87■□□□□ 0.45
TMEM248-205ENST00000433271 ENHOQ6UWT2 76 aa17.87■□□□□ 0.45
TMEM248-205ENST00000433271 LYSTQ99698 3801 aa17.86■□□□□ 0.45
TMEM248-205ENST00000433271 CRPP02741 224 aa17.86■□□□□ 0.45
TMEM248-205ENST00000433271 UBE2WQ96B02 151 aa17.86■□□□□ 0.45
TMEM248-205ENST00000433271 PMCHL2Q9BQD1 86 aa17.86■□□□□ 0.45
TMEM248-205ENST00000433271 CCL25O15444 150 aa17.85■□□□□ 0.45
TMEM248-205ENST00000433271 IGLV4-69A0A075B6H9 119 aa17.84■□□□□ 0.45
TMEM248-205ENST00000433271 IBA57-AS1B1ANH7 110 aa17.84■□□□□ 0.45
TMEM248-205ENST00000433271 SCGB1D1O95968 90 aa17.84■□□□□ 0.45
TMEM248-205ENST00000433271 JOSD1Q15040 202 aaPredicted RBP17.84■□□□□ 0.45
TMEM248-205ENST00000433271 FAM19A3Q7Z5A8 133 aa17.84■□□□□ 0.45
TMEM248-205ENST00000433271 A0A0J9YXV3 536 aa17.83■□□□□ 0.45
TMEM248-205ENST00000433271 SS18Q15532 418 aa17.83■□□□□ 0.45
TMEM248-205ENST00000433271 IGLC3P0DOY3 106 aa17.83■□□□□ 0.44
TMEM248-205ENST00000433271 SEC11AP67812 179 aa17.83■□□□□ 0.44
TMEM248-205ENST00000433271 LINC00242Q5T6M2 205 aa17.83■□□□□ 0.44
TMEM248-205ENST00000433271 DPM2O94777 84 aa17.82■□□□□ 0.44
TMEM248-205ENST00000433271 PLNP26678 52 aa17.82■□□□□ 0.44
TMEM248-205ENST00000433271 MIAQ16674 131 aa17.82■□□□□ 0.44
TMEM248-205ENST00000433271 LINC00476Q8WZB0 136 aa17.82■□□□□ 0.44
TMEM248-205ENST00000433271 VPS13DQ5THJ4 4388 aa17.82■□□□□ 0.44
TMEM248-205ENST00000433271 TINCRA0A1B0GVN0 87 aa17.81■□□□□ 0.44
TMEM248-205ENST00000433271 NFE4Q86UQ8 179 aa17.81■□□□□ 0.44
TMEM248-205ENST00000433271 TRAV8-4A0A0B4J246 113 aa17.8■□□□□ 0.44
TMEM248-205ENST00000433271 LY6G6CO95867 125 aa17.8■□□□□ 0.44
TMEM248-205ENST00000433271 PYY3Q5JQD4 70 aa17.8■□□□□ 0.44
TMEM248-205ENST00000433271 DNAH1Q9P2D7 4330 aa17.79■□□□□ 0.44
TMEM248-205ENST00000433271 TRAV8-3A0A0A6YYJ7 113 aa17.79■□□□□ 0.44
TMEM248-205ENST00000433271 C11orf86A6NJI1 115 aa17.79■□□□□ 0.44
TMEM248-205ENST00000433271 IGKCP01834 107 aa17.79■□□□□ 0.44
TMEM248-205ENST00000433271 TTC32Q5I0X7 151 aa17.79■□□□□ 0.44
TMEM248-205ENST00000433271 CHAC1Q9BUX1 264 aa17.79■□□□□ 0.44
TMEM248-205ENST00000433271 GEMIN7Q9H840 131 aaKnown RBP17.79■□□□□ 0.44
TMEM248-205ENST00000433271 IGLV10-54A0A075B6I4 117 aa17.78■□□□□ 0.44
TMEM248-205ENST00000433271 NBDYA0A0U1RRE5 68 aa17.78■□□□□ 0.44
TMEM248-205ENST00000433271 HERVK_113P63121 156 aa17.78■□□□□ 0.44
TMEM248-205ENST00000433271 COX6A2Q02221 97 aa17.78■□□□□ 0.44
TMEM248-205ENST00000433271 KRTAP1-5Q9BYS1 174 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms