RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 PRO1854Q9UHT4 67 aa11.93□□□□□ -0.5
CHFR-203ENST00000432561 NOP10Q9NPE3 64 aaKnown RBP11.92□□□□□ -0.5
CHFR-203ENST00000432561 TRAV25A0A0B4J276 109 aa11.92□□□□□ -0.5
CHFR-203ENST00000432561 ADAMTSL4-AS1Q5T5F5 129 aa11.92□□□□□ -0.5
CHFR-203ENST00000432561 SPANXA1Q9NS26 97 aa11.92□□□□□ -0.5
CHFR-203ENST00000432561 TSSC4Q9Y5U2 329 aaPredicted RBP11.92□□□□□ -0.5
CHFR-203ENST00000432561 IGHV1-58A0A0C4DH39 117 aa11.91□□□□□ -0.5
CHFR-203ENST00000432561 PRSS2P07478 247 aa11.91□□□□□ -0.5
CHFR-203ENST00000432561 GIG44P09565 113 aaPredicted RBP11.91□□□□□ -0.5
CHFR-203ENST00000432561 SMR3AQ99954 134 aa11.91□□□□□ -0.5
CHFR-203ENST00000432561 CDKN2A-AS1Q9UH64 79 aa11.91□□□□□ -0.5
CHFR-203ENST00000432561 IL17DQ8TAD2 202 aa11.91□□□□□ -0.5
CHFR-203ENST00000432561 NDUFA12Q9UI09 145 aa11.91□□□□□ -0.5
CHFR-203ENST00000432561 COX6A2Q02221 97 aa11.9□□□□□ -0.5
CHFR-203ENST00000432561 DNAJC30Q96LL9 226 aa11.9□□□□□ -0.5
CHFR-203ENST00000432561 LITAFQ99732 161 aa11.9□□□□□ -0.5
CHFR-203ENST00000432561 GEMIN7Q9H840 131 aaKnown RBP11.9□□□□□ -0.5
CHFR-203ENST00000432561 TINCRA0A1B0GVN0 87 aa11.9□□□□□ -0.5
CHFR-203ENST00000432561 SCGB1C2P0DMR2 95 aa11.9□□□□□ -0.5
CHFR-203ENST00000432561 DGAT2L7PQ6IED9 249 aa11.9□□□□□ -0.5
CHFR-203ENST00000432561 VSIG2Q96IQ7 327 aa11.9□□□□□ -0.5
CHFR-203ENST00000432561 GAGE12JA6NER3 117 aa11.9□□□□□ -0.51
CHFR-203ENST00000432561 TMEM238C9JI98 176 aa11.9□□□□□ -0.51
CHFR-203ENST00000432561 GAGE4Q13068 117 aa11.9□□□□□ -0.51
CHFR-203ENST00000432561 GAGE5Q13069 117 aa11.9□□□□□ -0.51
CHFR-203ENST00000432561 DAND5Q8N907 189 aa11.9□□□□□ -0.51
CHFR-203ENST00000432561 NTM-AS1Q6ZSK4 140 aa11.89□□□□□ -0.51
CHFR-203ENST00000432561 TMEM263Q8WUH6 116 aaKnown RBP11.89□□□□□ -0.51
CHFR-203ENST00000432561 CLUHP3Q96NS8 147 aa11.89□□□□□ -0.51
CHFR-203ENST00000432561 IGHV3-33P01772 117 aa11.88□□□□□ -0.51
CHFR-203ENST00000432561 CRYBA4P53673 196 aa11.88□□□□□ -0.51
CHFR-203ENST00000432561 LOC100131303A0A0U1RQF7 123 aa11.87□□□□□ -0.51
CHFR-203ENST00000432561 K7EQD1 137 aa11.87□□□□□ -0.51
CHFR-203ENST00000432561 GAGE7O76087 117 aa11.87□□□□□ -0.51
CHFR-203ENST00000432561 RNASE1P07998 156 aaKnown RBP11.87□□□□□ -0.51
CHFR-203ENST00000432561 GAGE12FP0CL80 117 aa11.87□□□□□ -0.51
CHFR-203ENST00000432561 GAGE12GP0CL81 117 aa11.87□□□□□ -0.51
CHFR-203ENST00000432561 GAGE12IP0CL82 117 aa11.87□□□□□ -0.51
CHFR-203ENST00000432561 TEX29Q8N6K0 151 aa11.87□□□□□ -0.51
CHFR-203ENST00000432561 GTSF1LQ9H1H1 148 aa11.87□□□□□ -0.51
CHFR-203ENST00000432561 KMT2BQ9UMN6 2715 aaPredicted RBP11.86□□□□□ -0.51
CHFR-203ENST00000432561 Q1RN00 199 aa11.86□□□□□ -0.51
CHFR-203ENST00000432561 OTOGQ6ZRI0 2925 aa11.86□□□□□ -0.51
CHFR-203ENST00000432561 TRAV13-1A0A0B4J241 112 aa11.86□□□□□ -0.51
CHFR-203ENST00000432561 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
CHFR-203ENST00000432561 PLAC8L1A1L4L8 177 aa11.85□□□□□ -0.51
CHFR-203ENST00000432561 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
CHFR-203ENST00000432561 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
CHFR-203ENST00000432561 A0A0U1RRA0 63 aa11.85□□□□□ -0.51
CHFR-203ENST00000432561 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
CHFR-203ENST00000432561 C19orf73Q9NVV2 129 aa11.85□□□□□ -0.51
CHFR-203ENST00000432561 ERG28Q9UKR5 140 aa11.85□□□□□ -0.51
CHFR-203ENST00000432561 TRGV2A0A075B6R0 118 aa11.84□□□□□ -0.51
CHFR-203ENST00000432561 IGLV1-51P01701 117 aa11.84□□□□□ -0.51
CHFR-203ENST00000432561 LINC00242Q5T6M2 205 aa11.84□□□□□ -0.51
CHFR-203ENST00000432561 TRAV4A0A0B4J268 109 aa11.83□□□□□ -0.52
CHFR-203ENST00000432561 A0A0B4J2C4 111 aa11.83□□□□□ -0.52
CHFR-203ENST00000432561 GAGE12HA6NDE8 117 aa11.83□□□□□ -0.52
CHFR-203ENST00000432561 C1QTNF4Q9BXJ3 329 aa11.83□□□□□ -0.52
CHFR-203ENST00000432561 C16orf95Q9H693 158 aa11.83□□□□□ -0.52
CHFR-203ENST00000432561 TENM1Q9UKZ4 2725 aa11.83□□□□□ -0.52
CHFR-203ENST00000432561 FOXI1Q12951 378 aa11.82□□□□□ -0.52
CHFR-203ENST00000432561 LYRM7Q5U5X0 104 aa11.82□□□□□ -0.52
CHFR-203ENST00000432561 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
CHFR-203ENST00000432561 J3QKU1 62 aa11.82□□□□□ -0.52
CHFR-203ENST00000432561 J3QR89 54 aa11.82□□□□□ -0.52
CHFR-203ENST00000432561 TRBV20-1A0A075B6N2 111 aa11.8□□□□□ -0.52
CHFR-203ENST00000432561 SMAGPQ0VAQ4 97 aa11.8□□□□□ -0.52
CHFR-203ENST00000432561 MIAQ16674 131 aa11.8□□□□□ -0.52
CHFR-203ENST00000432561 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.8□□□□□ -0.52
CHFR-203ENST00000432561 C9JAW5 83 aa11.8□□□□□ -0.52
CHFR-203ENST00000432561 KRTAP10-3P60369 221 aa11.8□□□□□ -0.52
CHFR-203ENST00000432561 CSNK1G2-AS1Q8NCQ2 148 aa11.8□□□□□ -0.52
CHFR-203ENST00000432561 CARD19Q96LW7 228 aa11.8□□□□□ -0.52
CHFR-203ENST00000432561 IGLV5-45A0A087WSX0 123 aa11.79□□□□□ -0.52
CHFR-203ENST00000432561 TRBV10-1A0A0K0K1A3 114 aa11.79□□□□□ -0.52
CHFR-203ENST00000432561 TIRAPP58753 221 aa11.79□□□□□ -0.52
CHFR-203ENST00000432561 Q9H8V8 135 aa11.79□□□□□ -0.52
CHFR-203ENST00000432561 TRIAP1O43715 76 aa11.79□□□□□ -0.52
CHFR-203ENST00000432561 HILS1P60008 231 aa11.79□□□□□ -0.52
CHFR-203ENST00000432561 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
CHFR-203ENST00000432561 DAZ4Q86SG3 579 aaKnown RBP11.79□□□□□ -0.52
CHFR-203ENST00000432561 SPANXDQ9BXN6 97 aa11.79□□□□□ -0.52
CHFR-203ENST00000432561 DAZ3Q9NR90 486 aaKnown RBP11.79□□□□□ -0.52
CHFR-203ENST00000432561 SPANXCQ9NY87 97 aa11.79□□□□□ -0.52
CHFR-203ENST00000432561 IGKV3OR2-268A0A0C4DH90 116 aa11.78□□□□□ -0.52
CHFR-203ENST00000432561 SBSPONQ8IVN8 264 aa11.78□□□□□ -0.52
CHFR-203ENST00000432561 C16orf74Q96GX8 76 aa11.78□□□□□ -0.52
CHFR-203ENST00000432561 ANKRD29Q8N6D5 301 aa11.78□□□□□ -0.52
CHFR-203ENST00000432561 CDC42SE2Q9NRR3 84 aa11.77□□□□□ -0.52
CHFR-203ENST00000432561 SMIM1B2RUZ4 78 aa11.77□□□□□ -0.53
CHFR-203ENST00000432561 HERVK_113P63121 156 aa11.77□□□□□ -0.53
CHFR-203ENST00000432561 TRGV4A0A0C4DH28 118 aa11.76□□□□□ -0.53
CHFR-203ENST00000432561 SLC25A20O43772 301 aa11.76□□□□□ -0.53
CHFR-203ENST00000432561 TEN1Q86WV5 123 aa11.76□□□□□ -0.53
CHFR-203ENST00000432561 SPATA3Q8NHX4 192 aa11.76□□□□□ -0.53
CHFR-203ENST00000432561 SIGMAR1Q99720 223 aa11.76□□□□□ -0.53
CHFR-203ENST00000432561 NDUFA1O15239 70 aa11.76□□□□□ -0.53
CHFR-203ENST00000432561 SPATA25Q9BR10 227 aa11.76□□□□□ -0.53
CHFR-203ENST00000432561 UBE2L6O14933 153 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms