RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 A6NDN8 102 aa13.8□□□□□ -0.2
VRK2-205ENST00000432057 FXYD2P54710 66 aa13.8□□□□□ -0.2
VRK2-205ENST00000432057 OXLD1Q5BKU9 147 aa13.8□□□□□ -0.2
VRK2-205ENST00000432057 FAM222AQ5U5X8 452 aa13.8□□□□□ -0.2
VRK2-205ENST00000432057 C3orf56Q8N813 242 aa13.8□□□□□ -0.2
VRK2-205ENST00000432057 PLEKHB2Q96CS7 222 aa13.8□□□□□ -0.2
VRK2-205ENST00000432057 K7EP13 123 aa13.8□□□□□ -0.2
VRK2-205ENST00000432057 DEFB4AO15263 64 aa13.8□□□□□ -0.2
VRK2-205ENST00000432057 DGAT2L7PQ6IED9 249 aa13.8□□□□□ -0.2
VRK2-205ENST00000432057 STAB1Q9NY15 2570 aa13.79□□□□□ -0.2
VRK2-205ENST00000432057 IGHV3-64A0A075B6Q5 118 aa13.79□□□□□ -0.2
VRK2-205ENST00000432057 IGHV4-28A0A0C4DH34 117 aa13.78□□□□□ -0.2
VRK2-205ENST00000432057 CEND1Q8N111 149 aa13.78□□□□□ -0.2
VRK2-205ENST00000432057 GTSF1LQ9H1H1 148 aa13.78□□□□□ -0.2
VRK2-205ENST00000432057 J3QQQ9 107 aa13.78□□□□□ -0.2
VRK2-205ENST00000432057 LINC00469Q8N7U9 141 aa13.78□□□□□ -0.2
VRK2-205ENST00000432057 TINCRA0A1B0GVN0 87 aa13.77□□□□□ -0.21
VRK2-205ENST00000432057 LYRM9A8MSI8 78 aa13.77□□□□□ -0.21
VRK2-205ENST00000432057 LEPROTO15243 131 aa13.77□□□□□ -0.21
VRK2-205ENST00000432057 HIST1H4GQ99525 98 aa13.77□□□□□ -0.21
VRK2-205ENST00000432057 TMEM243Q9BU79 118 aa13.77□□□□□ -0.21
VRK2-205ENST00000432057 UBE2D1P51668 147 aa13.76□□□□□ -0.21
VRK2-205ENST00000432057 KRTAP10-11P60412 298 aa13.76□□□□□ -0.21
VRK2-205ENST00000432057 TAL2Q16559 108 aa13.76□□□□□ -0.21
VRK2-205ENST00000432057 SCGB1D4Q6XE38 83 aa13.76□□□□□ -0.21
VRK2-205ENST00000432057 LGALS3P17931 250 aaKnown RBP13.76□□□□□ -0.21
VRK2-205ENST00000432057 TM2D2Q9BX73 214 aa13.76□□□□□ -0.21
VRK2-205ENST00000432057 UBE2L6O14933 153 aa13.75□□□□□ -0.21
VRK2-205ENST00000432057 SHISA2Q6UWI4 295 aa13.75□□□□□ -0.21
VRK2-205ENST00000432057 Q8NAQ8 132 aa13.75□□□□□ -0.21
VRK2-205ENST00000432057 PTTG1IPP53801 180 aa13.74□□□□□ -0.21
VRK2-205ENST00000432057 H3BRM9 83 aa13.74□□□□□ -0.21
VRK2-205ENST00000432057 RNF183Q96D59 192 aa13.74□□□□□ -0.21
VRK2-205ENST00000432057 CSDC2Q9Y534 153 aaKnown RBP13.74□□□□□ -0.21
VRK2-205ENST00000432057 PKD1L1Q8TDX9 2849 aa13.73□□□□□ -0.21
VRK2-205ENST00000432057 MIFP14174 115 aa13.73□□□□□ -0.21
VRK2-205ENST00000432057 GYPEP15421 78 aa13.73□□□□□ -0.21
VRK2-205ENST00000432057 AMMECR1LQ6DCA0 310 aa13.73□□□□□ -0.21
VRK2-205ENST00000432057 OR5A1Q8NGJ0 315 aa13.73□□□□□ -0.21
VRK2-205ENST00000432057 CELA1Q9UNI1 258 aa13.73□□□□□ -0.21
VRK2-205ENST00000432057 TRAV8-3A0A0A6YYJ7 113 aa13.72□□□□□ -0.21
VRK2-205ENST00000432057 RAB37Q96AX2 223 aa13.72□□□□□ -0.21
VRK2-205ENST00000432057 GEMIN7Q9H840 131 aaKnown RBP13.72□□□□□ -0.21
VRK2-205ENST00000432057 A0A0J9YY99 117 aa13.72□□□□□ -0.21
VRK2-205ENST00000432057 K7ERJ3 54 aa13.72□□□□□ -0.21
VRK2-205ENST00000432057 NHP2Q9NX24 153 aaKnown RBP13.72□□□□□ -0.21
VRK2-205ENST00000432057 SPINK8P0C7L1 97 aa13.71□□□□□ -0.21
VRK2-205ENST00000432057 IGHV3-30-3P0DP02 117 aa13.71□□□□□ -0.21
VRK2-205ENST00000432057 SMAGPQ0VAQ4 97 aa13.71□□□□□ -0.21
VRK2-205ENST00000432057 CDC42SE2Q9NRR3 84 aa13.71□□□□□ -0.21
VRK2-205ENST00000432057 PRO0255Q9UI72 69 aa13.71□□□□□ -0.21
VRK2-205ENST00000432057 TRBV6-8A0A0A6YYG3 113 aa13.7□□□□□ -0.22
VRK2-205ENST00000432057 DAD1P61803 113 aa13.7□□□□□ -0.22
VRK2-205ENST00000432057 GAGE6Q13070 117 aa13.7□□□□□ -0.22
VRK2-205ENST00000432057 VAMP3Q15836 100 aa13.7□□□□□ -0.22
VRK2-205ENST00000432057 SMIM13P0DJ93 91 aa13.7□□□□□ -0.22
VRK2-205ENST00000432057 TMEM101Q96IK0 257 aa13.7□□□□□ -0.22
VRK2-205ENST00000432057 NAA38Q9BRA0 125 aaKnown RBP13.7□□□□□ -0.22
VRK2-205ENST00000432057 CDKN2A-AS1Q9UH64 79 aa13.7□□□□□ -0.22
VRK2-205ENST00000432057 H7C423 109 aa13.69□□□□□ -0.22
VRK2-205ENST00000432057 TIRAPP58753 221 aa13.69□□□□□ -0.22
VRK2-205ENST00000432057 COX6A2Q02221 97 aa13.69□□□□□ -0.22
VRK2-205ENST00000432057 EGFEM1PQ0D2K5 195 aa13.69□□□□□ -0.22
VRK2-205ENST00000432057 IGLV5-45A0A087WSX0 123 aa13.68□□□□□ -0.22
VRK2-205ENST00000432057 IGHV1-58A0A0C4DH39 117 aa13.68□□□□□ -0.22
VRK2-205ENST00000432057 C9orf118A6NHY6 69 aa13.68□□□□□ -0.22
VRK2-205ENST00000432057 LINC00242Q5T6M2 205 aa13.68□□□□□ -0.22
VRK2-205ENST00000432057 ATP6V0E2Q8NHE4 81 aa13.68□□□□□ -0.22
VRK2-205ENST00000432057 TRAV13-1A0A0B4J241 112 aa13.67□□□□□ -0.22
VRK2-205ENST00000432057 CHCHD5Q9BSY4 110 aa13.67□□□□□ -0.22
VRK2-205ENST00000432057 H3BUT2 72 aa13.67□□□□□ -0.22
VRK2-205ENST00000432057 PAX4O43316 350 aa13.67□□□□□ -0.22
VRK2-205ENST00000432057 SRSF9Q13242 221 aaKnown RBP eCLIP13.67□□□□□ -0.22
VRK2-205ENST00000432057 FAM19A3Q7Z5A8 133 aa13.67□□□□□ -0.22
VRK2-205ENST00000432057 VSIG2Q96IQ7 327 aa13.67□□□□□ -0.22
VRK2-205ENST00000432057 A8MZ25 164 aa13.66□□□□□ -0.22
VRK2-205ENST00000432057 A0A096LPF7 62 aa13.65□□□□□ -0.22
VRK2-205ENST00000432057 HERVK_113P63121 156 aa13.65□□□□□ -0.22
VRK2-205ENST00000432057 UBE2V1Q13404 147 aa13.65□□□□□ -0.22
VRK2-205ENST00000432057 C10orf126Q8N4M7 172 aa13.65□□□□□ -0.22
VRK2-205ENST00000432057 SPANXB1Q9NS25 103 aaPredicted RBP13.65□□□□□ -0.22
VRK2-205ENST00000432057 DNAH3Q8TD57 4116 aa13.65□□□□□ -0.22
VRK2-205ENST00000432057 CCL25O15444 150 aa13.65□□□□□ -0.22
VRK2-205ENST00000432057 RETNQ9HD89 108 aa13.65□□□□□ -0.22
VRK2-205ENST00000432057 SPART-AS1P0CW21 52 aa13.64□□□□□ -0.23
VRK2-205ENST00000432057 IGLV4-60A0A075B6I1 120 aa13.63□□□□□ -0.23
VRK2-205ENST00000432057 ATP5G1P05496 136 aa13.63□□□□□ -0.23
VRK2-205ENST00000432057 C12orf74Q32Q52 190 aa13.63□□□□□ -0.23
VRK2-205ENST00000432057 G3V4G9 280 aa13.63□□□□□ -0.23
VRK2-205ENST00000432057 A0A0J9YXY3 114 aa13.62□□□□□ -0.23
VRK2-205ENST00000432057 NDUFA12Q9UI09 145 aa13.62□□□□□ -0.23
VRK2-205ENST00000432057 IGHV3-30P01768 117 aa13.61□□□□□ -0.23
VRK2-205ENST00000432057 IGHV3-30-5P0DP03 117 aa13.61□□□□□ -0.23
VRK2-205ENST00000432057 F5H768 121 aa13.61□□□□□ -0.23
VRK2-205ENST00000432057 HTN3P15516 51 aa13.61□□□□□ -0.23
VRK2-205ENST00000432057 TRAV26-1A0A087WT03 109 aa13.6□□□□□ -0.23
VRK2-205ENST00000432057 IGKV3OR2-268A0A0C4DH90 116 aa13.6□□□□□ -0.23
VRK2-205ENST00000432057 A0A1B0GWB2 263 aa13.6□□□□□ -0.23
VRK2-205ENST00000432057 ZFAND6Q6FIF0 208 aa13.6□□□□□ -0.23
VRK2-205ENST00000432057 COL6A5A8TX70 2615 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms