RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 TRIAP1O43715 76 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 CRLF1O75462 422 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 COX6A2Q02221 97 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 Q5PR19 223 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 PRO1854Q9UHT4 67 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 A0A0U1RRA0 63 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 B4DSR2 109 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 I3L3M4 83 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 GHRHP01286 108 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 HERVK_113P61574 105 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 SBSPONQ8IVN8 264 aa5.19□□□□□ -1.58
COL28A1-202ENST00000430711 FAM229AH3BQW9 127 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 M0R2P5 195 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 LINC00694P0DN24 101 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 SNRPD3P62318 126 aaKnown RBP5.18□□□□□ -1.58
COL28A1-202ENST00000430711 TEN1Q86WV5 123 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 Q8N3U1 123 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 CLEC2BQ92478 149 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 TEX49A0A1B0GTD5 131 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 TMEM238LA0A1B0GVL6 79 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 H3BMM0 161 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 PPP1R17O96001 155 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 SCGB1C2P0DMR2 95 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 C11orf72Q8NBR9 251 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 ZNF625Q96I27 306 aaPredicted RBP5.18□□□□□ -1.58
COL28A1-202ENST00000430711 VCX2Q9H322 139 aa5.18□□□□□ -1.58
COL28A1-202ENST00000430711 SLC25A20O43772 301 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 RHOHQ15669 191 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 NTN5Q8WTR8 489 aaPredicted RBP5.17□□□□□ -1.58
COL28A1-202ENST00000430711 UBE2D4Q9Y2X8 147 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 IGHV3OR16-12A0A075B7B8 117 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 TRAV26-1A0A087WT03 109 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 IGHV3-53P01767 116 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 PRSS2P07478 247 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 CKS1BP61024 79 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 ODF3Q96PU9 254 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 WFDC10AQ9H1F0 79 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 CDKN2A-AS1Q9UH64 79 aa5.17□□□□□ -1.58
COL28A1-202ENST00000430711 FN1P02751 2386 aaKnown RBP5.16□□□□□ -1.58
COL28A1-202ENST00000430711 FBN1P35555 2871 aaKnown RBP5.16□□□□□ -1.58
COL28A1-202ENST00000430711 CRYBA4P53673 196 aa5.16□□□□□ -1.58
COL28A1-202ENST00000430711 MRPS36P82909 103 aaKnown RBP5.16□□□□□ -1.58
COL28A1-202ENST00000430711 KHDC1LQ5JSQ8 128 aa5.16□□□□□ -1.58
COL28A1-202ENST00000430711 ATP6V0E2Q8NHE4 81 aa5.16□□□□□ -1.58
COL28A1-202ENST00000430711 PPDPFLQ8WWR9 84 aa5.16□□□□□ -1.58
COL28A1-202ENST00000430711 UBE2E2Q96LR5 201 aa5.16□□□□□ -1.58
COL28A1-202ENST00000430711 TIMM21Q9BVV7 248 aa5.16□□□□□ -1.58
COL28A1-202ENST00000430711 MAP6D1Q9H9H5 199 aa5.16□□□□□ -1.58
COL28A1-202ENST00000430711 XCL2Q9UBD3 114 aa5.16□□□□□ -1.58
COL28A1-202ENST00000430711 VPREB3Q9UKI3 123 aa5.16□□□□□ -1.58
COL28A1-202ENST00000430711 A0A1W2PRX2 142 aa5.15□□□□□ -1.58
COL28A1-202ENST00000430711 TMEM89A2RUT3 159 aa5.15□□□□□ -1.58
COL28A1-202ENST00000430711 A8MWV9 139 aa5.15□□□□□ -1.58
COL28A1-202ENST00000430711 Q1RN00 199 aa5.15□□□□□ -1.58
COL28A1-202ENST00000430711 PAPPA-AS1Q5QFB9 102 aa5.15□□□□□ -1.58
COL28A1-202ENST00000430711 SOSTDC1Q6X4U4 206 aa5.15□□□□□ -1.58
COL28A1-202ENST00000430711 IGHV4-31P0DP07 118 aa5.15□□□□□ -1.59
COL28A1-202ENST00000430711 Q8N2B8 174 aa5.15□□□□□ -1.59
COL28A1-202ENST00000430711 LINC01356Q8N9X3 169 aa5.15□□□□□ -1.59
COL28A1-202ENST00000430711 RNF183Q96D59 192 aa5.15□□□□□ -1.59
COL28A1-202ENST00000430711 VSIG2Q96IQ7 327 aa5.15□□□□□ -1.59
COL28A1-202ENST00000430711 NDUFA12Q9UI09 145 aa5.15□□□□□ -1.59
COL28A1-202ENST00000430711 ERG28Q9UKR5 140 aa5.15□□□□□ -1.59
COL28A1-202ENST00000430711 TRAV4A0A0B4J268 109 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 J3QR89 54 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 FSHBP01225 129 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 ODF3L2Q3SX64 289 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 Q6YL49 198 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 NTM-AS1Q6ZSK4 140 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 PRIMA1Q86XR5 153 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 A0A0B4J2C4 111 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 IGHV1-58A0A0C4DH39 117 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 LOC100131303A0A0U1RQF7 123 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 NHLRC4P0CG21 123 aaPredicted RBP5.14□□□□□ -1.59
COL28A1-202ENST00000430711 LINC01620Q4KN68 170 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 CITED2Q99967 270 aaPredicted RBP5.14□□□□□ -1.59
COL28A1-202ENST00000430711 GEMIN7Q9H840 131 aaKnown RBP5.14□□□□□ -1.59
COL28A1-202ENST00000430711 TNFRSF18Q9Y5U5 241 aa5.14□□□□□ -1.59
COL28A1-202ENST00000430711 TRGV11A0A075B6L2 103 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 H7C423 109 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 SHISA2Q6UWI4 295 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 C1orf158Q8N1D5 194 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 TMEM101Q96IK0 257 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 LINC01587Q99440 93 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 TENM1Q9UKZ4 2725 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 A8MTW9 85 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 SCGB1A1P11684 91 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 Q6ZTI0 123 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 Q96MF0 132 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 CITED1Q99966 193 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 ICOSQ9Y6W8 199 aa5.13□□□□□ -1.59
COL28A1-202ENST00000430711 RNF152Q8N8N0 203 aa5.12□□□□□ -1.59
COL28A1-202ENST00000430711 PYGO1Q9Y3Y4 419 aa5.12□□□□□ -1.59
COL28A1-202ENST00000430711 TRBV20-1A0A075B6N2 111 aa5.12□□□□□ -1.59
COL28A1-202ENST00000430711 MIAQ16674 131 aa5.12□□□□□ -1.59
COL28A1-202ENST00000430711 DEFB114Q30KQ6 69 aa5.12□□□□□ -1.59
COL28A1-202ENST00000430711 LINC00242Q5T6M2 205 aa5.12□□□□□ -1.59
COL28A1-202ENST00000430711 TRAV13-1A0A0B4J241 112 aa5.11□□□□□ -1.59
COL28A1-202ENST00000430711 RPL13AP40429 203 aaKnown RBP5.11□□□□□ -1.59
COL28A1-202ENST00000430711 TTC32Q5I0X7 151 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms