RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 CHCHD7Q9BUK0 85 aa8.06□□□□□ -1.12
SEMA4D-209ENST00000429836 CSMD2Q7Z408 3487 aa8.06□□□□□ -1.12
SEMA4D-209ENST00000429836 NDUFA1O15239 70 aa8.05□□□□□ -1.12
SEMA4D-209ENST00000429836 CXCL5P42830 114 aa8.05□□□□□ -1.12
SEMA4D-209ENST00000429836 CIRBPQ14011 172 aaKnown RBP8.05□□□□□ -1.12
SEMA4D-209ENST00000429836 BRD3OSQ6XYD6 125 aa8.05□□□□□ -1.12
SEMA4D-209ENST00000429836 Q6ZSN1 163 aa8.05□□□□□ -1.12
SEMA4D-209ENST00000429836 TRAV25A0A0B4J276 109 aa8.05□□□□□ -1.12
SEMA4D-209ENST00000429836 A0A087WVE0 104 aa8.04□□□□□ -1.12
SEMA4D-209ENST00000429836 C9orf129Q5T035 196 aaKnown RBP8.04□□□□□ -1.12
SEMA4D-209ENST00000429836 C11orf71Q6IPW1 123 aa8.04□□□□□ -1.12
SEMA4D-209ENST00000429836 CCL21O00585 134 aa8.04□□□□□ -1.12
SEMA4D-209ENST00000429836 TRACP01848 142 aa8.04□□□□□ -1.12
SEMA4D-209ENST00000429836 DSCR8Q96T75 97 aa8.04□□□□□ -1.12
SEMA4D-209ENST00000429836 USP9YO00507 2555 aaPredicted RBP8.04□□□□□ -1.12
SEMA4D-209ENST00000429836 ATOX1O00244 68 aa8.04□□□□□ -1.12
SEMA4D-209ENST00000429836 OXTP01178 125 aa8.04□□□□□ -1.12
SEMA4D-209ENST00000429836 HIST1H4AP62805 103 aaKnown RBP8.04□□□□□ -1.12
SEMA4D-209ENST00000429836 PIK3CD-AS1Q5SR53 167 aa8.03□□□□□ -1.12
SEMA4D-209ENST00000429836 CACNA1AO00555 2505 aa8.03□□□□□ -1.12
SEMA4D-209ENST00000429836 UTP20O75691 2785 aaKnown RBP8.03□□□□□ -1.12
SEMA4D-209ENST00000429836 POLQO75417 2590 aa8.03□□□□□ -1.12
SEMA4D-209ENST00000429836 NOTCH3Q9UM47 2321 aa8.02□□□□□ -1.13
SEMA4D-209ENST00000429836 RBMY1A1P0DJD3 496 aaKnown RBP8.02□□□□□ -1.13
SEMA4D-209ENST00000429836 RBMY1CP0DJD4 496 aa8.02□□□□□ -1.13
SEMA4D-209ENST00000429836 BLCAPP62952 87 aa8.02□□□□□ -1.13
SEMA4D-209ENST00000429836 RBMY1FQ15415 496 aaKnown RBP8.02□□□□□ -1.13
SEMA4D-209ENST00000429836 C14orf132Q9NPU4 83 aa8.02□□□□□ -1.13
SEMA4D-209ENST00000429836 ZFYVE26Q68DK2 2539 aa8.02□□□□□ -1.13
SEMA4D-209ENST00000429836 SYNJ2BPP57105 145 aa8.02□□□□□ -1.13
SEMA4D-209ENST00000429836 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
SEMA4D-209ENST00000429836 INAFM2P0DMQ5 153 aa8.01□□□□□ -1.13
SEMA4D-209ENST00000429836 MALP21145 153 aa8.01□□□□□ -1.13
SEMA4D-209ENST00000429836 RPL18AQ02543 176 aaKnown RBP8.01□□□□□ -1.13
SEMA4D-209ENST00000429836 USMG5Q96IX5 58 aa8.01□□□□□ -1.13
SEMA4D-209ENST00000429836 RPS28P62857 69 aaKnown RBP8.01□□□□□ -1.13
SEMA4D-209ENST00000429836 C4orf26Q17RF5 130 aa8.01□□□□□ -1.13
SEMA4D-209ENST00000429836 PRIMA1Q86XR5 153 aa8.01□□□□□ -1.13
SEMA4D-209ENST00000429836 A0A1W2PPR1 153 aa8□□□□□ -1.13
SEMA4D-209ENST00000429836 ABCA2Q9BZC7 2435 aa8□□□□□ -1.13
SEMA4D-209ENST00000429836 DNAL4O96015 105 aa8□□□□□ -1.13
SEMA4D-209ENST00000429836 DGAT2L7PQ6IED9 249 aa8□□□□□ -1.13
SEMA4D-209ENST00000429836 HRCT1Q6UXD1 115 aa8□□□□□ -1.13
SEMA4D-209ENST00000429836 RNF152Q8N8N0 203 aa8□□□□□ -1.13
SEMA4D-209ENST00000429836 IGHV3OR16-12A0A075B7B8 117 aa8□□□□□ -1.13
SEMA4D-209ENST00000429836 BPESC1Q9GZL8 116 aa8□□□□□ -1.13
SEMA4D-209ENST00000429836 ITPR1Q14643 2758 aa7.99□□□□□ -1.13
SEMA4D-209ENST00000429836 LINC00846Q9NV44 126 aa7.99□□□□□ -1.13
SEMA4D-209ENST00000429836 FLNCQ14315 2725 aa7.99□□□□□ -1.13
SEMA4D-209ENST00000429836 C2CD3Q4AC94 2353 aa7.99□□□□□ -1.13
SEMA4D-209ENST00000429836 LMO4P61968 165 aa7.99□□□□□ -1.13
SEMA4D-209ENST00000429836 SNRPD3P62318 126 aaKnown RBP7.99□□□□□ -1.13
SEMA4D-209ENST00000429836 FAM222AQ5U5X8 452 aa7.99□□□□□ -1.13
SEMA4D-209ENST00000429836 UPK3BQ9BT76 320 aa7.99□□□□□ -1.13
SEMA4D-209ENST00000429836 ZANQ9Y493 2812 aa7.98□□□□□ -1.13
SEMA4D-209ENST00000429836 IGLV5-45A0A087WSX0 123 aa7.98□□□□□ -1.13
SEMA4D-209ENST00000429836 A0A087WYN8 130 aa7.98□□□□□ -1.13
SEMA4D-209ENST00000429836 WIPF1O43516 503 aa7.98□□□□□ -1.13
SEMA4D-209ENST00000429836 LINC00242Q5T6M2 205 aa7.98□□□□□ -1.13
SEMA4D-209ENST00000429836 IGLV5-39A0A0G2JS06 123 aa7.98□□□□□ -1.13
SEMA4D-209ENST00000429836 F5H768 121 aa7.98□□□□□ -1.13
SEMA4D-209ENST00000429836 SERP2Q8N6R1 65 aa7.98□□□□□ -1.13
SEMA4D-209ENST00000429836 SETD2Q9BYW2 2564 aaPredicted RBP7.98□□□□□ -1.13
SEMA4D-209ENST00000429836 SMIM1B2RUZ4 78 aa7.97□□□□□ -1.13
SEMA4D-209ENST00000429836 H3BUX3 64 aa7.97□□□□□ -1.13
SEMA4D-209ENST00000429836 LINC01561Q8N1V8 128 aa7.97□□□□□ -1.13
SEMA4D-209ENST00000429836 PIMREGQ9BSJ6 248 aa7.97□□□□□ -1.13
SEMA4D-209ENST00000429836 MYO18BQ8IUG5 2567 aa7.97□□□□□ -1.13
SEMA4D-209ENST00000429836 K7ENP7 123 aa7.97□□□□□ -1.13
SEMA4D-209ENST00000429836 TMEM258P61165 79 aa7.97□□□□□ -1.13
SEMA4D-209ENST00000429836 C10orf99Q6UWK7 81 aa7.97□□□□□ -1.13
SEMA4D-209ENST00000429836 K7EQG2 157 aa7.96□□□□□ -1.13
SEMA4D-209ENST00000429836 HIST2H2BCQ6DN03 193 aa7.96□□□□□ -1.13
SEMA4D-209ENST00000429836 HIST2H2BDQ6DRA6 164 aa7.96□□□□□ -1.13
SEMA4D-209ENST00000429836 TLN2Q9Y4G6 2542 aa7.96□□□□□ -1.14
SEMA4D-209ENST00000429836 USP17L23D6RBM5 183 aa7.96□□□□□ -1.14
SEMA4D-209ENST00000429836 LINC00337Q8N6G1 96 aa7.96□□□□□ -1.14
SEMA4D-209ENST00000429836 FAM208BQ5VWN6 2430 aa7.96□□□□□ -1.14
SEMA4D-209ENST00000429836 K7EMT4 169 aa7.95□□□□□ -1.14
SEMA4D-209ENST00000429836 NCR3O14931 201 aa7.95□□□□□ -1.14
SEMA4D-209ENST00000429836 IGHV4-38-2P0DP08 117 aa7.95□□□□□ -1.14
SEMA4D-209ENST00000429836 FBXL19-AS1Q494R0 122 aa7.95□□□□□ -1.14
SEMA4D-209ENST00000429836 ACACBO00763 2458 aa7.95□□□□□ -1.14
SEMA4D-209ENST00000429836 USP9XQ93008 2570 aaPredicted RBP7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 IGLV1-40P01703 118 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 CRPP02741 224 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 SLPIP03973 132 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 HILS1P60008 231 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 Q6JHZ5 121 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 PKD1L2Q7Z442 2459 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 H3BUA1 57 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 RPL28P46779 137 aaKnown RBP7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 Q5XG85 94 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 WFDC9Q8NEX5 89 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 C10orf105Q8TEF2 133 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 COPS9Q8WXC6 57 aa7.94□□□□□ -1.14
SEMA4D-209ENST00000429836 IGKV2-28A0A075B6P5 120 aa7.93□□□□□ -1.14
SEMA4D-209ENST00000429836 IGKV2D-28P01615 120 aa7.93□□□□□ -1.14
SEMA4D-209ENST00000429836 ADORA2A-AS1P86434 159 aa7.93□□□□□ -1.14
SEMA4D-209ENST00000429836 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms